RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 KRTAP4-1Q9BYQ7 146 aa1.68□□□□□ -2.14
VBP1-204ENST00000625964 MFFQ9GZY8 342 aa1.68□□□□□ -2.14
VBP1-204ENST00000625964 RPF2Q9H7B2 306 aaKnown RBP1.68□□□□□ -2.14
VBP1-204ENST00000625964 ISYNA1Q9NPH2 558 aa1.68□□□□□ -2.14
VBP1-204ENST00000625964 GPATCH2LQ9NWQ4 482 aa1.68□□□□□ -2.14
VBP1-204ENST00000625964 DDX49Q9Y6V7 483 aaKnown RBP1.68□□□□□ -2.14
VBP1-204ENST00000625964 IQGAP3Q86VI3 1631 aa1.68□□□□□ -2.14
VBP1-204ENST00000625964 PIEZO1Q92508 2521 aa1.68□□□□□ -2.14
VBP1-204ENST00000625964 YTHDC2Q9H6S0 1430 aaKnown RBP1.68□□□□□ -2.14
VBP1-204ENST00000625964 TTC28Q96AY4 2481 aa1.68□□□□□ -2.14
VBP1-204ENST00000625964 EIF3AQ14152 1382 aaKnown RBP1.67□□□□□ -2.14
VBP1-204ENST00000625964 ALS2Q96Q42 1657 aa1.67□□□□□ -2.14
VBP1-204ENST00000625964 LRRC37A3O60309 1634 aa1.67□□□□□ -2.14
VBP1-204ENST00000625964 CLTCL1P53675 1640 aa1.67□□□□□ -2.14
VBP1-204ENST00000625964 SGK1O00141 431 aa1.67□□□□□ -2.14
VBP1-204ENST00000625964 GMFGO60234 142 aa1.67□□□□□ -2.14
VBP1-204ENST00000625964 HLA-DPB1P04440 258 aa1.67□□□□□ -2.14
VBP1-204ENST00000625964 RNASE2P10153 161 aaKnown RBP1.67□□□□□ -2.14
VBP1-204ENST00000625964 SERPINB5P36952 375 aa1.67□□□□□ -2.14
VBP1-204ENST00000625964 CDKN2BP42772 138 aa1.67□□□□□ -2.14
VBP1-204ENST00000625964 CSNK1A1P48729 337 aa1.67□□□□□ -2.14
VBP1-204ENST00000625964 CX3CR1P49238 355 aa1.67□□□□□ -2.14
VBP1-204ENST00000625964 IRX3P78415 501 aaPredicted RBP1.67□□□□□ -2.14
VBP1-204ENST00000625964 OGDHQ02218 1023 aa1.67□□□□□ -2.14
VBP1-204ENST00000625964 PDK3Q15120 406 aa1.67□□□□□ -2.14
VBP1-204ENST00000625964 RABL6Q3YEC7 729 aaPredicted RBP1.67□□□□□ -2.14
VBP1-204ENST00000625964 FAM78AQ5JUQ0 283 aa1.67□□□□□ -2.14
VBP1-204ENST00000625964 NTM-AS1Q6ZSK4 140 aa1.67□□□□□ -2.14
VBP1-204ENST00000625964 OAFQ86UD1 273 aa1.67□□□□□ -2.14
VBP1-204ENST00000625964 LHFPL3Q86UP9 236 aa1.67□□□□□ -2.14
VBP1-204ENST00000625964 CALHM3Q86XJ0 350 aa1.67□□□□□ -2.14
VBP1-204ENST00000625964 MMAAQ8IVH4 418 aaKnown RBP1.67□□□□□ -2.14
VBP1-204ENST00000625964 GMCL1P1Q8NEA9 526 aa1.67□□□□□ -2.14
VBP1-204ENST00000625964 L3HYPDHQ96EM0 354 aa1.67□□□□□ -2.14
VBP1-204ENST00000625964 PLEKHA8Q96JA3 519 aa1.67□□□□□ -2.14
VBP1-204ENST00000625964 PSKH2Q96QS6 385 aa1.67□□□□□ -2.14
VBP1-204ENST00000625964 FMO2Q99518 471 aa1.67□□□□□ -2.14
VBP1-204ENST00000625964 TMEM43Q9BTV4 400 aa1.67□□□□□ -2.14
VBP1-204ENST00000625964 ZSCAN5AQ9BUG6 496 aa1.67□□□□□ -2.14
VBP1-204ENST00000625964 TMEM59Q9BXS4 323 aa1.67□□□□□ -2.14
VBP1-204ENST00000625964 NIPAL2Q9H841 368 aa1.67□□□□□ -2.14
VBP1-204ENST00000625964 PSG8Q9UQ74 426 aa1.67□□□□□ -2.14
VBP1-204ENST00000625964 PIGLQ9Y2B2 252 aa1.67□□□□□ -2.14
VBP1-204ENST00000625964 MRPS18BQ9Y676 258 aaKnown RBP1.67□□□□□ -2.14
VBP1-204ENST00000625964 CEP290O15078 2479 aa1.67□□□□□ -2.14
VBP1-204ENST00000625964 QSER1Q2KHR3 1735 aa1.67□□□□□ -2.14
VBP1-204ENST00000625964 TRPM3Q9HCF6 1732 aaPredicted RBP1.67□□□□□ -2.14
VBP1-204ENST00000625964 KDM6AO15550 1401 aaPredicted RBP1.67□□□□□ -2.14
VBP1-204ENST00000625964 CASP8AP2Q9UKL3 1982 aa1.67□□□□□ -2.14
VBP1-204ENST00000625964 LMO7Q8WWI1 1683 aa1.67□□□□□ -2.14
VBP1-204ENST00000625964 POLR3AO14802 1390 aaPredicted RBP1.67□□□□□ -2.14
VBP1-204ENST00000625964 ANKRD36BQ8N2N9 1353 aa1.67□□□□□ -2.14
VBP1-204ENST00000625964 USP47Q96K76 1375 aa1.67□□□□□ -2.14
VBP1-204ENST00000625964 HIVEP2P31629 2446 aa1.67□□□□□ -2.14
VBP1-204ENST00000625964 PIKFYVEQ9Y2I7 2098 aa1.66□□□□□ -2.14
VBP1-204ENST00000625964 A0A1B0GVL5 298 aa1.66□□□□□ -2.14
VBP1-204ENST00000625964 ZNF208O43345 1280 aa1.66□□□□□ -2.14
VBP1-204ENST00000625964 SNNO75324 88 aaPredicted RBP1.66□□□□□ -2.14
VBP1-204ENST00000625964 EIF3GO75821 320 aaKnown RBP eCLIP1.66□□□□□ -2.14
VBP1-204ENST00000625964 IGKV4-1P06312 121 aa1.66□□□□□ -2.14
VBP1-204ENST00000625964 C2P06681 752 aa1.66□□□□□ -2.14
VBP1-204ENST00000625964 GNAO1P09471 354 aa1.66□□□□□ -2.14
VBP1-204ENST00000625964 DESP17661 470 aa1.66□□□□□ -2.14
VBP1-204ENST00000625964 HRH1P35367 487 aa1.66□□□□□ -2.14
VBP1-204ENST00000625964 SSR1P43307 286 aaKnown RBP1.66□□□□□ -2.14
VBP1-204ENST00000625964 CDKN1BP46527 198 aa1.66□□□□□ -2.14
VBP1-204ENST00000625964 RFX3P48380 749 aa1.66□□□□□ -2.14
VBP1-204ENST00000625964 ARG2P78540 354 aa1.66□□□□□ -2.14
VBP1-204ENST00000625964 TCP10Q12799 353 aa1.66□□□□□ -2.14
VBP1-204ENST00000625964 MAB21L1Q13394 359 aa1.66□□□□□ -2.14
VBP1-204ENST00000625964 PHYHD1Q5SRE7 291 aa1.66□□□□□ -2.14
VBP1-204ENST00000625964 LRRC74BQ6ZQY2 392 aa1.66□□□□□ -2.14
VBP1-204ENST00000625964 RNF139Q8WU17 664 aa1.66□□□□□ -2.14
VBP1-204ENST00000625964 ABHD3Q8WU67 409 aa1.66□□□□□ -2.14
VBP1-204ENST00000625964 CREB3L1Q96BA8 519 aa1.66□□□□□ -2.14
VBP1-204ENST00000625964 FAM3DQ96BQ1 224 aa1.66□□□□□ -2.14
VBP1-204ENST00000625964 TBC1D31Q96DN5 1066 aa1.66□□□□□ -2.14
VBP1-204ENST00000625964 NEURL3Q96EH8 262 aa1.66□□□□□ -2.14
VBP1-204ENST00000625964 RNF157Q96PX1 679 aa1.66□□□□□ -2.14
VBP1-204ENST00000625964 CNN2Q99439 309 aaKnown RBP1.66□□□□□ -2.14
VBP1-204ENST00000625964 P2RX4Q99571 388 aa1.66□□□□□ -2.14
VBP1-204ENST00000625964 SLC25A2Q9BXI2 301 aa1.66□□□□□ -2.14
VBP1-204ENST00000625964 SYNDIG1Q9H7V2 258 aa1.66□□□□□ -2.14
VBP1-204ENST00000625964 COL18A1P39060 1754 aa1.66□□□□□ -2.14
VBP1-204ENST00000625964 E9PCH4 1651 aa1.66□□□□□ -2.14
VBP1-204ENST00000625964 TNRC6CQ9HCJ0 1690 aaKnown RBP1.66□□□□□ -2.14
VBP1-204ENST00000625964 CACNA1GO43497 2377 aa1.66□□□□□ -2.14
VBP1-204ENST00000625964 PPIP5K1Q6PFW1 1433 aa1.66□□□□□ -2.14
VBP1-204ENST00000625964 TRPM1Q7Z4N2 1603 aa1.66□□□□□ -2.14
VBP1-204ENST00000625964 NSD2O96028 1365 aa1.66□□□□□ -2.14
VBP1-204ENST00000625964 VIRMAQ69YN4 1812 aaKnown RBP1.66□□□□□ -2.14
VBP1-204ENST00000625964 RGPD8O14715 1765 aaPredicted RBP1.66□□□□□ -2.14
VBP1-204ENST00000625964 CRYBG1Q9Y4K1 1723 aa1.66□□□□□ -2.14
VBP1-204ENST00000625964 IGLV3-12A0A075B6K2 115 aa1.66□□□□□ -2.14
VBP1-204ENST00000625964 TRAV39A0A0B4J263 110 aa1.66□□□□□ -2.14
VBP1-204ENST00000625964 ZNF233A6NK53 670 aa1.66□□□□□ -2.14
VBP1-204ENST00000625964 TIMM8AO60220 97 aaPredicted RBP1.66□□□□□ -2.14
VBP1-204ENST00000625964 CCNKO75909 580 aa1.66□□□□□ -2.14
VBP1-204ENST00000625964 UTS2O95399 124 aa1.66□□□□□ -2.14
VBP1-204ENST00000625964 C1orf105O95561 183 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms