RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 APOBEC1P41238 236 aaKnown RBP14.67□□□□□ -0.06
GABRB3-215ENST00000622697 PXDC1Q5TGL8 231 aa14.67□□□□□ -0.06
GABRB3-215ENST00000622697 OR8D4Q8NGM9 314 aa14.67□□□□□ -0.06
GABRB3-215ENST00000622697 OR2G2Q8NGZ5 317 aa14.67□□□□□ -0.06
GABRB3-215ENST00000622697 ABHD5Q8WTS1 349 aa14.67□□□□□ -0.06
GABRB3-215ENST00000622697 SCARB1Q8WTV0 552 aa14.67□□□□□ -0.06
GABRB3-215ENST00000622697 TRIP12Q14669 1992 aaPredicted RBP14.67□□□□□ -0.06
GABRB3-215ENST00000622697 SULT1C2O00338 296 aa14.67□□□□□ -0.06
GABRB3-215ENST00000622697 FFAR1O14842 300 aa14.67□□□□□ -0.06
GABRB3-215ENST00000622697 CER1O95813 267 aa14.67□□□□□ -0.06
GABRB3-215ENST00000622697 ABHD16AO95870 558 aa14.67□□□□□ -0.06
GABRB3-215ENST00000622697 GIPP09681 153 aaPredicted RBP14.67□□□□□ -0.06
GABRB3-215ENST00000622697 SRSF5Q13243 272 aaKnown RBP14.67□□□□□ -0.06
GABRB3-215ENST00000622697 AADACL3Q5VUY0 350 aa14.67□□□□□ -0.06
GABRB3-215ENST00000622697 B8ZZF3 427 aa14.67□□□□□ -0.06
GABRB3-215ENST00000622697 MCRIP1C9JLW8 97 aa14.67□□□□□ -0.06
GABRB3-215ENST00000622697 CDC42EP2O14613 210 aa14.67□□□□□ -0.06
GABRB3-215ENST00000622697 CD79BP40259 229 aa14.67□□□□□ -0.06
GABRB3-215ENST00000622697 PCBP3P57721 371 aaKnown RBP14.67□□□□□ -0.06
GABRB3-215ENST00000622697 MAMSTRQ6ZN01 415 aa14.67□□□□□ -0.06
GABRB3-215ENST00000622697 GJC3Q8NFK1 279 aa14.67□□□□□ -0.06
GABRB3-215ENST00000622697 OR56B2PQ8NGI1 322 aa14.67□□□□□ -0.06
GABRB3-215ENST00000622697 PLEKHA3Q9HB20 300 aa14.67□□□□□ -0.06
GABRB3-215ENST00000622697 ZNF223Q9UK11 482 aaPredicted RBP14.67□□□□□ -0.06
GABRB3-215ENST00000622697 TRAPPC2LQ9UL33 140 aa14.67□□□□□ -0.06
GABRB3-215ENST00000622697 SHISA8B8ZZ34 492 aa14.66□□□□□ -0.06
GABRB3-215ENST00000622697 ATG12O94817 140 aa14.66□□□□□ -0.06
GABRB3-215ENST00000622697 ATF1P18846 271 aa14.66□□□□□ -0.06
GABRB3-215ENST00000622697 HMGA2P52926 109 aa14.66□□□□□ -0.06
GABRB3-215ENST00000622697 LSM11P83369 360 aaKnown RBP eCLIP14.66□□□□□ -0.06
GABRB3-215ENST00000622697 EXOSC2Q13868 293 aaKnown RBP14.66□□□□□ -0.06
GABRB3-215ENST00000622697 OR2L13Q8N349 312 aa14.66□□□□□ -0.06
GABRB3-215ENST00000622697 PIGQQ9BRB3 760 aa14.66□□□□□ -0.06
GABRB3-215ENST00000622697 ERVMER34-1Q9H9K5 563 aa14.66□□□□□ -0.06
GABRB3-215ENST00000622697 TMEM184BQ9Y519 407 aaPredicted RBP14.66□□□□□ -0.06
GABRB3-215ENST00000622697 TCN2P20062 427 aa14.66□□□□□ -0.06
GABRB3-215ENST00000622697 EIF1P41567 113 aaKnown RBP14.66□□□□□ -0.06
GABRB3-215ENST00000622697 FRZBQ92765 325 aa14.66□□□□□ -0.06
GABRB3-215ENST00000622697 SLC25A31Q9H0C2 315 aa14.66□□□□□ -0.06
GABRB3-215ENST00000622697 SH3BGRL2Q9UJC5 107 aa14.66□□□□□ -0.06
GABRB3-215ENST00000622697 A0A1W2PPC4 97 aa14.66□□□□□ -0.06
GABRB3-215ENST00000622697 TMEM221A6NGB7 291 aa14.66□□□□□ -0.06
GABRB3-215ENST00000622697 SLC34A2O95436 690 aa14.66□□□□□ -0.06
GABRB3-215ENST00000622697 IL2RGP31785 369 aa14.66□□□□□ -0.06
GABRB3-215ENST00000622697 PPP1CAP62136 330 aa14.66□□□□□ -0.06
GABRB3-215ENST00000622697 BAMBIQ13145 260 aa14.66□□□□□ -0.06
GABRB3-215ENST00000622697 SLC17A1Q14916 467 aa14.66□□□□□ -0.06
GABRB3-215ENST00000622697 BPHLQ86WA6 291 aaPredicted RBP14.66□□□□□ -0.06
GABRB3-215ENST00000622697 SLC22A11Q9NSA0 550 aa14.66□□□□□ -0.06
GABRB3-215ENST00000622697 EXO1Q9UQ84 846 aaKnown RBP14.66□□□□□ -0.06
GABRB3-215ENST00000622697 TRBV5-3A0A0A0MS03 114 aa14.66□□□□□ -0.06
GABRB3-215ENST00000622697 AGAP14A8MT82 685 aa14.66□□□□□ -0.06
GABRB3-215ENST00000622697 TRIM61Q5EBN2 209 aa14.66□□□□□ -0.06
GABRB3-215ENST00000622697 SFRP5Q5T4F7 317 aa14.66□□□□□ -0.06
GABRB3-215ENST00000622697 THSD4Q6ZMP0 1018 aa14.66□□□□□ -0.06
GABRB3-215ENST00000622697 OR5L1Q8NGL2 311 aa14.66□□□□□ -0.06
GABRB3-215ENST00000622697 RNF141Q8WVD5 230 aa14.66□□□□□ -0.06
GABRB3-215ENST00000622697 NINQ8N4C6 2090 aa14.66□□□□□ -0.06
GABRB3-215ENST00000622697 IGHV3-64DA0A0J9YX35 117 aa14.66□□□□□ -0.06
GABRB3-215ENST00000622697 RPS10-NUDT3A0A1W2PQS6 291 aa14.66□□□□□ -0.06
GABRB3-215ENST00000622697 DRD3P35462 400 aa14.66□□□□□ -0.06
GABRB3-215ENST00000622697 RPS10P46783 165 aaKnown RBP14.66□□□□□ -0.06
GABRB3-215ENST00000622697 EIF4EBP2Q13542 120 aaPredicted RBP14.66□□□□□ -0.06
GABRB3-215ENST00000622697 EMC4Q5J8M3 183 aa14.66□□□□□ -0.06
GABRB3-215ENST00000622697 POMT2Q9UKY4 750 aa14.66□□□□□ -0.06
GABRB3-215ENST00000622697 A0A1B0GTH9 108 aa14.65□□□□□ -0.06
GABRB3-215ENST00000622697 FAM221AA4D161 298 aa14.65□□□□□ -0.06
GABRB3-215ENST00000622697 LINC00303Q3SY05 128 aa14.65□□□□□ -0.06
GABRB3-215ENST00000622697 ZNF680Q8NEM1 530 aa14.65□□□□□ -0.06
GABRB3-215ENST00000622697 TCTEX1D2Q8WW35 142 aa14.65□□□□□ -0.06
GABRB3-215ENST00000622697 GPR84Q9NQS5 396 aa14.65□□□□□ -0.06
GABRB3-215ENST00000622697 CSAG2Q9Y5P2 127 aa14.65□□□□□ -0.06
GABRB3-215ENST00000622697 CEBPZOSA8MTT3 80 aa14.65□□□□□ -0.06
GABRB3-215ENST00000622697 MSTNO14793 375 aa14.65□□□□□ -0.06
GABRB3-215ENST00000622697 WISP3O95389 354 aaPredicted RBP14.65□□□□□ -0.06
GABRB3-215ENST00000622697 ETV6P41212 452 aa14.65□□□□□ -0.06
GABRB3-215ENST00000622697 GABRA2P47869 451 aa14.65□□□□□ -0.06
GABRB3-215ENST00000622697 SNRPNP63162 240 aaKnown RBP14.65□□□□□ -0.06
GABRB3-215ENST00000622697 NAXDQ8IW45 347 aa14.65□□□□□ -0.06
GABRB3-215ENST00000622697 WDR34Q96EX3 536 aa14.65□□□□□ -0.06
GABRB3-215ENST00000622697 C12orf49Q9H741 205 aa14.65□□□□□ -0.06
GABRB3-215ENST00000622697 CTSFQ9UBX1 484 aa14.65□□□□□ -0.06
GABRB3-215ENST00000622697 SERTM1A2A2V5 107 aa14.65□□□□□ -0.06
GABRB3-215ENST00000622697 EIF1BO60739 113 aaKnown RBP14.65□□□□□ -0.06
GABRB3-215ENST00000622697 GABRG2P18507 467 aa14.65□□□□□ -0.06
GABRB3-215ENST00000622697 CD53P19397 219 aa14.65□□□□□ -0.06
GABRB3-215ENST00000622697 NKX6-1P78426 367 aaPredicted RBP14.65□□□□□ -0.06
GABRB3-215ENST00000622697 VHLLQ6RSH7 139 aa14.65□□□□□ -0.06
GABRB3-215ENST00000622697 GRAMD2AQ8IUY3 354 aa14.65□□□□□ -0.06
GABRB3-215ENST00000622697 C17orf47Q8NEP4 570 aa14.65□□□□□ -0.06
GABRB3-215ENST00000622697 JAM3Q9BX67 310 aa14.65□□□□□ -0.06
GABRB3-215ENST00000622697 ANKRD31Q8N7Z5 1873 aa14.65□□□□□ -0.06
GABRB3-215ENST00000622697 OTOL1A6NHN0 477 aaPredicted RBP14.65□□□□□ -0.06
GABRB3-215ENST00000622697 H0YIG0 161 aa14.65□□□□□ -0.06
GABRB3-215ENST00000622697 OR2J2O76002 312 aa14.65□□□□□ -0.06
GABRB3-215ENST00000622697 ERVK-16P61578 105 aa14.65□□□□□ -0.06
GABRB3-215ENST00000622697 TGFBR3Q03167 851 aa14.65□□□□□ -0.06
GABRB3-215ENST00000622697 SHEQ5VZ18 495 aa14.65□□□□□ -0.06
GABRB3-215ENST00000622697 LIPHQ8WWY8 451 aa14.65□□□□□ -0.06
GABRB3-215ENST00000622697 A0A0B4J2E0 115 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms