RNA–Protein interactions for RNA: ENST00000622464.4

AGAP3-226, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene AGAP3, Length 3,121 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-226ENST00000622464 POLR1DQ9Y2S0 133 aa11.66□□□□□ -0.54
AGAP3-226ENST00000622464 C9J4A7 227 aa11.66□□□□□ -0.54
AGAP3-226ENST00000622464 NTN3O00634 580 aaPredicted RBP11.66□□□□□ -0.54
AGAP3-226ENST00000622464 IL32P24001 234 aa11.66□□□□□ -0.54
AGAP3-226ENST00000622464 SLC6A1P30531 599 aa11.66□□□□□ -0.54
AGAP3-226ENST00000622464 DCTDP32321 178 aa11.66□□□□□ -0.54
AGAP3-226ENST00000622464 RIDAP52758 137 aaKnown RBP11.66□□□□□ -0.54
AGAP3-226ENST00000622464 CTAG1AP78358 180 aa11.66□□□□□ -0.54
AGAP3-226ENST00000622464 EGR3Q06889 387 aa11.66□□□□□ -0.54
AGAP3-226ENST00000622464 RNF144BQ7Z419 303 aa11.66□□□□□ -0.54
AGAP3-226ENST00000622464 OR52N5Q8NH56 324 aa11.66□□□□□ -0.54
AGAP3-226ENST00000622464 MFSD8Q8NHS3 518 aa11.66□□□□□ -0.54
AGAP3-226ENST00000622464 NKD1Q969G9 470 aa11.66□□□□□ -0.54
AGAP3-226ENST00000622464 KCNK17Q96T54 332 aa11.66□□□□□ -0.54
AGAP3-226ENST00000622464 SLITRK2Q9H156 845 aa11.66□□□□□ -0.54
AGAP3-226ENST00000622464 NUP50Q9UKX7 468 aa11.66□□□□□ -0.54
AGAP3-226ENST00000622464 TMEM14AQ9Y6G1 99 aa11.66□□□□□ -0.54
AGAP3-226ENST00000622464 TRBV5-5A0A0J9YX44 114 aa11.66□□□□□ -0.54
AGAP3-226ENST00000622464 RIN1Q13671 783 aa11.66□□□□□ -0.54
AGAP3-226ENST00000622464 PLA1AQ53H76 456 aa11.66□□□□□ -0.54
AGAP3-226ENST00000622464 MISPQ8IVT2 679 aa11.66□□□□□ -0.54
AGAP3-226ENST00000622464 CMKLR1Q99788 373 aa11.66□□□□□ -0.54
AGAP3-226ENST00000622464 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.66□□□□□ -0.548e-7■■■■□ 19.8
AGAP3-226ENST00000622464 ZNF254O75437 659 aa11.65□□□□□ -0.54
AGAP3-226ENST00000622464 MPLP40238 635 aa11.65□□□□□ -0.54
AGAP3-226ENST00000622464 PRSS12P56730 875 aa11.65□□□□□ -0.54
AGAP3-226ENST00000622464 ZFP36L1Q07352 338 aaKnown RBP11.65□□□□□ -0.54
AGAP3-226ENST00000622464 FCN2Q15485 313 aa11.65□□□□□ -0.54
AGAP3-226ENST00000622464 LAMTOR1Q6IAA8 161 aa11.65□□□□□ -0.54
AGAP3-226ENST00000622464 TIPARPQ7Z3E1 657 aaKnown RBP11.65□□□□□ -0.54
AGAP3-226ENST00000622464 DND1Q8IYX4 353 aaKnown RBP11.65□□□□□ -0.54
AGAP3-226ENST00000622464 DUSP18Q8NEJ0 188 aa11.65□□□□□ -0.54
AGAP3-226ENST00000622464 HAVCR2Q8TDQ0 301 aa11.65□□□□□ -0.54
AGAP3-226ENST00000622464 CACNG6Q9BXT2 260 aa11.65□□□□□ -0.54
AGAP3-226ENST00000622464 NSG1A0A0A6YYJ2 146 aa11.65□□□□□ -0.54
AGAP3-226ENST00000622464 TMEM269A0A1B0GVZ9 245 aa11.65□□□□□ -0.54
AGAP3-226ENST00000622464 LNP1A1A4G5 178 aa11.65□□□□□ -0.54
AGAP3-226ENST00000622464 TMEM212A6NML5 194 aa11.65□□□□□ -0.54
AGAP3-226ENST00000622464 KHDRBS3O75525 346 aaKnown RBP11.65□□□□□ -0.54
AGAP3-226ENST00000622464 STK17BO94768 372 aa11.65□□□□□ -0.54
AGAP3-226ENST00000622464 LDOC1O95751 146 aaPredicted RBP11.65□□□□□ -0.54
AGAP3-226ENST00000622464 TCN2P20062 427 aa11.65□□□□□ -0.54
AGAP3-226ENST00000622464 HOXA6P31267 233 aa11.65□□□□□ -0.54
AGAP3-226ENST00000622464 CLRN1P58418 232 aa11.65□□□□□ -0.54
AGAP3-226ENST00000622464 IL11RAQ14626 422 aa11.65□□□□□ -0.54
AGAP3-226ENST00000622464 FAM122CQ6P4D5 195 aa11.65□□□□□ -0.54
AGAP3-226ENST00000622464 CFAP77Q6ZQR2 320 aa11.65□□□□□ -0.54
AGAP3-226ENST00000622464 RTN4RL2Q86UN3 420 aa11.65□□□□□ -0.54
AGAP3-226ENST00000622464 RNF128Q8TEB7 428 aa11.65□□□□□ -0.54
AGAP3-226ENST00000622464 SDHAF3Q9NRP4 125 aa11.65□□□□□ -0.54
AGAP3-226ENST00000622464 PPIEQ9UNP9 301 aaKnown RBP11.65□□□□□ -0.54
AGAP3-226ENST00000622464 FOXJ3Q9UPW0 622 aa11.65□□□□□ -0.54
AGAP3-226ENST00000622464 DHDHQ9UQ10 334 aa11.65□□□□□ -0.54
AGAP3-226ENST00000622464 LOC107986453A0A1B0GWG9 222 aa11.64□□□□□ -0.55
AGAP3-226ENST00000622464 C5orf63A6NC05 138 aa11.64□□□□□ -0.55
AGAP3-226ENST00000622464 PDCD5O14737 125 aa11.64□□□□□ -0.55
AGAP3-226ENST00000622464 ZNHIT1O43257 154 aa11.64□□□□□ -0.55
AGAP3-226ENST00000622464 PTH2RP49190 550 aa11.64□□□□□ -0.55
AGAP3-226ENST00000622464 YRDCQ86U90 279 aaKnown RBP11.64□□□□□ -0.55
AGAP3-226ENST00000622464 CDH24Q86UP0 819 aa11.64□□□□□ -0.55
AGAP3-226ENST00000622464 UEVLDQ8IX04 471 aa11.64□□□□□ -0.55
AGAP3-226ENST00000622464 OIT3Q8WWZ8 545 aa11.64□□□□□ -0.55
AGAP3-226ENST00000622464 SLC25A44Q96H78 314 aaPredicted RBP11.64□□□□□ -0.55
AGAP3-226ENST00000622464 MARVELD1Q9BSK0 173 aa11.64□□□□□ -0.55
AGAP3-226ENST00000622464 OR10A4Q9H209 315 aa11.64□□□□□ -0.55
AGAP3-226ENST00000622464 ZCCHC4Q9H5U6 513 aa11.64□□□□□ -0.55
AGAP3-226ENST00000622464 MRPS18BQ9Y676 258 aaKnown RBP11.64□□□□□ -0.55
AGAP3-226ENST00000622464 NCOA6Q14686 2063 aaPredicted RBP11.64□□□□□ -0.55
AGAP3-226ENST00000622464 SULT2B1O00204 365 aa11.64□□□□□ -0.55
AGAP3-226ENST00000622464 TCRBP04435 133 aa11.64□□□□□ -0.55
AGAP3-226ENST00000622464 TRAPPC2P0DI81 140 aa11.64□□□□□ -0.55
AGAP3-226ENST00000622464 TRAPPC2BP0DI82 140 aa11.64□□□□□ -0.55
AGAP3-226ENST00000622464 CRABP1P29762 137 aa11.64□□□□□ -0.55
AGAP3-226ENST00000622464 CAPZA2P47755 286 aa11.64□□□□□ -0.55
AGAP3-226ENST00000622464 POU3F4P49335 361 aa11.64□□□□□ -0.55
AGAP3-226ENST00000622464 SNTB2Q13425 540 aaKnown RBP11.64□□□□□ -0.55
AGAP3-226ENST00000622464 C3orf33Q6P1S2 294 aa11.64□□□□□ -0.55
AGAP3-226ENST00000622464 ZNF767PQ75MW2 155 aa11.64□□□□□ -0.55
AGAP3-226ENST00000622464 COMMD2Q86X83 199 aa11.64□□□□□ -0.55
AGAP3-226ENST00000622464 PLCZ1Q86YW0 608 aa11.64□□□□□ -0.55
AGAP3-226ENST00000622464 OR8H3Q8N146 312 aa11.64□□□□□ -0.55
AGAP3-226ENST00000622464 JAGN1Q8N5M9 183 aa11.64□□□□□ -0.55
AGAP3-226ENST00000622464 OR13C3Q8NGS6 347 aa11.64□□□□□ -0.55
AGAP3-226ENST00000622464 ST7LQ8TDW4 575 aa11.64□□□□□ -0.55
AGAP3-226ENST00000622464 ASB5Q8WWX0 329 aa11.64□□□□□ -0.55
AGAP3-226ENST00000622464 ALKBH4Q9NXW9 302 aa11.64□□□□□ -0.55
AGAP3-226ENST00000622464 CAMK2AQ9UQM7 478 aa11.64□□□□□ -0.55
AGAP3-226ENST00000622464 RER1O15258 196 aa11.64□□□□□ -0.55
AGAP3-226ENST00000622464 DKK1O94907 266 aa11.64□□□□□ -0.55
AGAP3-226ENST00000622464 H2BFMP0C1H6 154 aa11.64□□□□□ -0.55
AGAP3-226ENST00000622464 CXCL3P19876 107 aa11.64□□□□□ -0.55
AGAP3-226ENST00000622464 DAP3P51398 398 aaKnown RBP11.64□□□□□ -0.55
AGAP3-226ENST00000622464 Q0VFX4 171 aa11.64□□□□□ -0.55
AGAP3-226ENST00000622464 MRPL28Q13084 256 aaKnown RBP11.64□□□□□ -0.55
AGAP3-226ENST00000622464 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.64□□□□□ -0.55
AGAP3-226ENST00000622464 GALNT11Q8NCW6 608 aa11.64□□□□□ -0.55
AGAP3-226ENST00000622464 OR10S1Q8NGN2 331 aa11.64□□□□□ -0.55
AGAP3-226ENST00000622464 DVL3Q92997 716 aaPredicted RBP11.64□□□□□ -0.55
AGAP3-226ENST00000622464 FAM46BQ96A09 425 aa11.64□□□□□ -0.55
AGAP3-226ENST00000622464 IMMP1LQ96LU5 166 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms