RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 SOHLH2Q9NX45 425 aa14.18□□□□□ -0.14
NPHP4-211ENST00000622020 RASL12Q9NYN1 266 aa14.18□□□□□ -0.14
NPHP4-211ENST00000622020 FADS1O60427 444 aa14.18□□□□□ -0.14
NPHP4-211ENST00000622020 HLA-DOBP13765 273 aa14.18□□□□□ -0.14
NPHP4-211ENST00000622020 CNR1P21554 472 aa14.18□□□□□ -0.14
NPHP4-211ENST00000622020 ZNF117Q03924 483 aa14.18□□□□□ -0.14
NPHP4-211ENST00000622020 FMODQ06828 376 aa14.18□□□□□ -0.14
NPHP4-211ENST00000622020 EGR3Q06889 387 aa14.18□□□□□ -0.14
NPHP4-211ENST00000622020 PDSS1Q5T2R2 415 aa14.18□□□□□ -0.14
NPHP4-211ENST00000622020 GLT8D1Q68CQ7 371 aa14.18□□□□□ -0.14
NPHP4-211ENST00000622020 CBLN2Q8IUK8 224 aa14.18□□□□□ -0.14
NPHP4-211ENST00000622020 LILRB1Q8NHL6 650 aaPredicted RBP14.18□□□□□ -0.14
NPHP4-211ENST00000622020 PAQR8Q8TEZ7 354 aa14.18□□□□□ -0.14
NPHP4-211ENST00000622020 ZNF768Q9H5H4 540 aaKnown RBP14.18□□□□□ -0.14
NPHP4-211ENST00000622020 PCDHB10Q9UN67 800 aa14.18□□□□□ -0.14
NPHP4-211ENST00000622020 COA3Q9Y2R0 106 aaPredicted RBP14.18□□□□□ -0.14
NPHP4-211ENST00000622020 TMEM14AQ9Y6G1 99 aa14.18□□□□□ -0.14
NPHP4-211ENST00000622020 ASXL3Q9C0F0 2248 aa14.18□□□□□ -0.14
NPHP4-211ENST00000622020 C5orf51A6NDU8 294 aa14.17□□□□□ -0.14
NPHP4-211ENST00000622020 OR2AT4A6NND4 320 aa14.17□□□□□ -0.14
NPHP4-211ENST00000622020 DISC1C4P0D8 188 aa14.17□□□□□ -0.14
NPHP4-211ENST00000622020 GNALP38405 381 aa14.17□□□□□ -0.14
NPHP4-211ENST00000622020 INSM1Q01101 510 aaPredicted RBP14.17□□□□□ -0.14
NPHP4-211ENST00000622020 GUCA2BQ16661 112 aa14.17□□□□□ -0.14
NPHP4-211ENST00000622020 C11orf87Q6NUJ2 197 aa14.17□□□□□ -0.14
NPHP4-211ENST00000622020 TMEM92Q6UXU6 159 aa14.17□□□□□ -0.14
NPHP4-211ENST00000622020 ZNF679Q8IYX0 411 aa14.17□□□□□ -0.14
NPHP4-211ENST00000622020 C19orf47Q8N9M1 422 aaKnown RBP14.17□□□□□ -0.14
NPHP4-211ENST00000622020 OR4D6Q8NGJ1 314 aa14.17□□□□□ -0.14
NPHP4-211ENST00000622020 SLC41A2Q96JW4 573 aa14.17□□□□□ -0.14
NPHP4-211ENST00000622020 TSNAXQ99598 290 aaKnown RBP14.17□□□□□ -0.14
NPHP4-211ENST00000622020 ABHD6Q9BV23 337 aa14.17□□□□□ -0.14
NPHP4-211ENST00000622020 UPB1Q9UBR1 384 aa14.17□□□□□ -0.14
NPHP4-211ENST00000622020 GPN3Q9UHW5 284 aaPredicted RBP14.17□□□□□ -0.14
NPHP4-211ENST00000622020 GLS2Q9UI32 602 aa14.17□□□□□ -0.14
NPHP4-211ENST00000622020 LRP12Q9Y561 859 aa14.17□□□□□ -0.14
NPHP4-211ENST00000622020 BDKRB2P30411 391 aa14.17□□□□□ -0.14
NPHP4-211ENST00000622020 IL13RA1P78552 427 aa14.17□□□□□ -0.14
NPHP4-211ENST00000622020 SRSF3P84103 164 aaKnown RBP14.17□□□□□ -0.14
NPHP4-211ENST00000622020 ZP2Q05996 745 aa14.17□□□□□ -0.14
NPHP4-211ENST00000622020 ISXQ2M1V0 245 aa14.17□□□□□ -0.14
NPHP4-211ENST00000622020 RAB12Q6IQ22 244 aa14.17□□□□□ -0.14
NPHP4-211ENST00000622020 ZNF584Q8IVC4 421 aa14.17□□□□□ -0.14
NPHP4-211ENST00000622020 DEFB119Q8N690 84 aa14.17□□□□□ -0.14
NPHP4-211ENST00000622020 CLRN3Q8NCR9 226 aa14.17□□□□□ -0.14
NPHP4-211ENST00000622020 ADAD2Q8NCV1 583 aaKnown RBP14.17□□□□□ -0.14
NPHP4-211ENST00000622020 SLC19A3Q9BZV2 496 aa14.17□□□□□ -0.14
NPHP4-211ENST00000622020 H0YIG0 161 aa14.17□□□□□ -0.14
NPHP4-211ENST00000622020 LINC01387J3KSC0 135 aa14.17□□□□□ -0.14
NPHP4-211ENST00000622020 P2RY10O00398 339 aa14.17□□□□□ -0.14
NPHP4-211ENST00000622020 ZNF432O94892 652 aa14.17□□□□□ -0.14
NPHP4-211ENST00000622020 TNFP01375 233 aa14.17□□□□□ -0.14
NPHP4-211ENST00000622020 CD2P06729 351 aa14.17□□□□□ -0.14
NPHP4-211ENST00000622020 IL11P20809 199 aa14.17□□□□□ -0.14
NPHP4-211ENST00000622020 TMPPEQ6ZT21 453 aa14.17□□□□□ -0.14
NPHP4-211ENST00000622020 ZSCAN1Q8NBB4 408 aa14.17□□□□□ -0.14
NPHP4-211ENST00000622020 OR5M8Q8NGP6 311 aa14.17□□□□□ -0.14
NPHP4-211ENST00000622020 ROBO4Q8WZ75 1007 aa14.17□□□□□ -0.14
NPHP4-211ENST00000622020 SLC25A32Q9H2D1 315 aa14.17□□□□□ -0.14
NPHP4-211ENST00000622020 MBD2Q9UBB5 411 aa14.17□□□□□ -0.14
NPHP4-211ENST00000622020 EPHA6Q9UF33 1036 aa14.17□□□□□ -0.14
NPHP4-211ENST00000622020 GMEB2Q9UKD1 530 aa14.17□□□□□ -0.14
NPHP4-211ENST00000622020 RNF222A6NCQ9 220 aa14.16□□□□□ -0.14
NPHP4-211ENST00000622020 EIF4E2O60573 245 aaKnown RBP14.16□□□□□ -0.14
NPHP4-211ENST00000622020 PI3P19957 117 aa14.16□□□□□ -0.14
NPHP4-211ENST00000622020 B2MP61769 119 aa14.16□□□□□ -0.14
NPHP4-211ENST00000622020 SLC18B1Q6NT16 456 aa14.16□□□□□ -0.14
NPHP4-211ENST00000622020 PAPD4Q6PIY7 484 aaKnown RBP14.16□□□□□ -0.14
NPHP4-211ENST00000622020 CPNE2Q96FN4 548 aaPredicted RBP14.16□□□□□ -0.14
NPHP4-211ENST00000622020 ATPIF1Q9UII2 106 aa14.16□□□□□ -0.14
NPHP4-211ENST00000622020 A0A1W2PPC1 479 aa14.16□□□□□ -0.14
NPHP4-211ENST00000622020 UBBP0CG47 229 aa14.16□□□□□ -0.14
NPHP4-211ENST00000622020 UBCP0CG48 685 aaKnown RBP14.16□□□□□ -0.14
NPHP4-211ENST00000622020 PRKXP51817 358 aa14.16□□□□□ -0.14
NPHP4-211ENST00000622020 NR0B1P51843 470 aaKnown RBP14.16□□□□□ -0.14
NPHP4-211ENST00000622020 RPS27AP62979 156 aaKnown RBP14.16□□□□□ -0.14
NPHP4-211ENST00000622020 UBA52P62987 128 aaKnown RBP14.16□□□□□ -0.14
NPHP4-211ENST00000622020 AKIRIN2Q53H80 203 aa14.16□□□□□ -0.14
NPHP4-211ENST00000622020 BARX1Q9HBU1 254 aaPredicted RBP14.16□□□□□ -0.14
NPHP4-211ENST00000622020 ZNF175Q9Y473 711 aa14.16□□□□□ -0.14
NPHP4-211ENST00000622020 PRSS37A4D1T9 235 aa14.15□□□□□ -0.14
NPHP4-211ENST00000622020 ZNF735P0CB33 412 aa14.15□□□□□ -0.14
NPHP4-211ENST00000622020 GNB3P16520 340 aa14.15□□□□□ -0.14
NPHP4-211ENST00000622020 RIDAP52758 137 aaKnown RBP14.15□□□□□ -0.14
NPHP4-211ENST00000622020 FUT7Q11130 342 aa14.15□□□□□ -0.14
NPHP4-211ENST00000622020 SNTB1Q13884 538 aaKnown RBP14.15□□□□□ -0.14
NPHP4-211ENST00000622020 RNASE10Q5GAN6 216 aaKnown RBP14.15□□□□□ -0.14
NPHP4-211ENST00000622020 C16orf47Q6ZP98 133 aaPredicted RBP14.15□□□□□ -0.14
NPHP4-211ENST00000622020 RNF144BQ7Z419 303 aa14.15□□□□□ -0.14
NPHP4-211ENST00000622020 TRAPPC6BQ86SZ2 158 aa14.15□□□□□ -0.14
NPHP4-211ENST00000622020 FJX1Q86VR8 437 aa14.15□□□□□ -0.14
NPHP4-211ENST00000622020 USB1Q9BQ65 265 aaKnown RBP14.15□□□□□ -0.14
NPHP4-211ENST00000622020 TNFSF18Q9UNG2 199 aa14.15□□□□□ -0.14
NPHP4-211ENST00000622020 A0A0B4J2A0 478 aa14.15□□□□□ -0.14
NPHP4-211ENST00000622020 CPED1A4D0V7 1026 aa14.15□□□□□ -0.14
NPHP4-211ENST00000622020 ERCC1P07992 297 aaPredicted RBP14.15□□□□□ -0.14
NPHP4-211ENST00000622020 PGAM2P15259 253 aa14.15□□□□□ -0.14
NPHP4-211ENST00000622020 MPPED2Q15777 294 aa14.15□□□□□ -0.14
NPHP4-211ENST00000622020 TMEM71Q6P5X7 295 aa14.15□□□□□ -0.14
NPHP4-211ENST00000622020 SHISA6Q6ZSJ9 500 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms