RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 MMP15P51511 669 aa14.61□□□□□ -0.07
HMGN3-203ENST00000620514 SPIBQ01892 262 aa14.61□□□□□ -0.07
HMGN3-203ENST00000620514 SAMD4BQ5PRF9 694 aaKnown RBP14.61□□□□□ -0.07
HMGN3-203ENST00000620514 AVPI1Q5T686 147 aa14.61□□□□□ -0.07
HMGN3-203ENST00000620514 MBNL2Q5VZF2 373 aaKnown RBP14.61□□□□□ -0.07
HMGN3-203ENST00000620514 GPR139Q6DWJ6 353 aa14.61□□□□□ -0.07
HMGN3-203ENST00000620514 USP51Q70EK9 711 aa14.61□□□□□ -0.07
HMGN3-203ENST00000620514 PIGWQ7Z7B1 504 aa14.61□□□□□ -0.07
HMGN3-203ENST00000620514 C4orf45Q96LM5 186 aa14.61□□□□□ -0.07
HMGN3-203ENST00000620514 POFUT1Q9H488 388 aa14.61□□□□□ -0.07
HMGN3-203ENST00000620514 LPAR2Q9HBW0 351 aa14.61□□□□□ -0.07
HMGN3-203ENST00000620514 VSX1Q9NZR4 365 aaPredicted RBP14.61□□□□□ -0.07
HMGN3-203ENST00000620514 TMEFF2Q9UIK5 374 aaPredicted RBP14.61□□□□□ -0.07
HMGN3-203ENST00000620514 ARL2BPQ9Y2Y0 163 aa14.61□□□□□ -0.07
HMGN3-203ENST00000620514 IGHV1-69-2A0A0G2JMI3 117 aa14.6□□□□□ -0.07
HMGN3-203ENST00000620514 DOK2O60496 412 aa14.6□□□□□ -0.07
HMGN3-203ENST00000620514 ICMTO60725 284 aa14.6□□□□□ -0.07
HMGN3-203ENST00000620514 KHDRBS3O75525 346 aaKnown RBP14.6□□□□□ -0.07
HMGN3-203ENST00000620514 MT-ND5P03915 603 aa14.6□□□□□ -0.07
HMGN3-203ENST00000620514 ITGA2P17301 1181 aa14.6□□□□□ -0.07
HMGN3-203ENST00000620514 CDKN2AP42771 156 aaKnown RBP14.6□□□□□ -0.07
HMGN3-203ENST00000620514 HTR5AP47898 357 aa14.6□□□□□ -0.07
HMGN3-203ENST00000620514 LMO4P61968 165 aa14.6□□□□□ -0.07
HMGN3-203ENST00000620514 MVKQ03426 396 aa14.6□□□□□ -0.07
HMGN3-203ENST00000620514 DBPQ10586 325 aaPredicted RBP14.6□□□□□ -0.07
HMGN3-203ENST00000620514 UNQ6126/PRO20091Q6UXV3 157 aa14.6□□□□□ -0.07
HMGN3-203ENST00000620514 DPY19L2P2Q6ZN68 376 aa14.6□□□□□ -0.07
HMGN3-203ENST00000620514 ZER1Q7Z7L7 766 aa14.6□□□□□ -0.07
HMGN3-203ENST00000620514 TMEM158Q8WZ71 300 aa14.6□□□□□ -0.07
HMGN3-203ENST00000620514 NSMCE2Q96MF7 247 aa14.6□□□□□ -0.07
HMGN3-203ENST00000620514 LRRC37BQ96QE4 947 aa14.6□□□□□ -0.07
HMGN3-203ENST00000620514 NUAK2Q9H093 628 aa14.6□□□□□ -0.07
HMGN3-203ENST00000620514 DECR2Q9NUI1 292 aa14.6□□□□□ -0.07
HMGN3-203ENST00000620514 NDRG4Q9ULP0 352 aaKnown RBP14.6□□□□□ -0.07
HMGN3-203ENST00000620514 B4DSR2 109 aa14.59□□□□□ -0.07
HMGN3-203ENST00000620514 SGCEO43556 437 aa14.59□□□□□ -0.07
HMGN3-203ENST00000620514 GADD45GO95257 159 aa14.59□□□□□ -0.07
HMGN3-203ENST00000620514 PPP1R3DO95685 299 aa14.59□□□□□ -0.07
HMGN3-203ENST00000620514 ABHD16AO95870 558 aa14.59□□□□□ -0.07
HMGN3-203ENST00000620514 GPANK1O95872 356 aa14.59□□□□□ -0.07
HMGN3-203ENST00000620514 TXNDC12O95881 172 aa14.59□□□□□ -0.07
HMGN3-203ENST00000620514 TFP02787 698 aa14.59□□□□□ -0.07
HMGN3-203ENST00000620514 GAAP10253 952 aa14.59□□□□□ -0.07
HMGN3-203ENST00000620514 COX5BP10606 129 aa14.59□□□□□ -0.07
HMGN3-203ENST00000620514 ARHGDIAP52565 204 aa14.59□□□□□ -0.07
HMGN3-203ENST00000620514 DVL1P1P54792 670 aaPredicted RBP14.59□□□□□ -0.07
HMGN3-203ENST00000620514 SCRN3Q0VDG4 424 aa14.59□□□□□ -0.07
HMGN3-203ENST00000620514 HNRNPA0Q13151 305 aaKnown RBP14.59□□□□□ -0.07
HMGN3-203ENST00000620514 SPRNQ5BIV9 151 aa14.59□□□□□ -0.07
HMGN3-203ENST00000620514 SMARCD3Q6STE5 483 aa14.59□□□□□ -0.07
HMGN3-203ENST00000620514 VASH1Q7L8A9 365 aaPredicted RBP14.59□□□□□ -0.07
HMGN3-203ENST00000620514 GLB1L2Q8IW92 636 aa14.59□□□□□ -0.07
HMGN3-203ENST00000620514 DEFB107AQ8IZN7 70 aa14.59□□□□□ -0.07
HMGN3-203ENST00000620514 SLC7A6Q92536 515 aa14.59□□□□□ -0.07
HMGN3-203ENST00000620514 TSSK2Q96PF2 358 aa14.59□□□□□ -0.07
HMGN3-203ENST00000620514 WACQ9BTA9 647 aa14.59□□□□□ -0.07
HMGN3-203ENST00000620514 SAP30LQ9HAJ7 183 aa14.59□□□□□ -0.07
HMGN3-203ENST00000620514 ELOVL3Q9HB03 270 aa14.59□□□□□ -0.07
HMGN3-203ENST00000620514 KRCC1Q9NPI7 259 aaPredicted RBP14.59□□□□□ -0.07
HMGN3-203ENST00000620514 ASH2LQ9UBL3 628 aa14.59□□□□□ -0.07
HMGN3-203ENST00000620514 PLSCR5A0PG75 271 aa14.58□□□□□ -0.08
HMGN3-203ENST00000620514 DCTN6O00399 190 aa14.58□□□□□ -0.08
HMGN3-203ENST00000620514 FABP3P05413 133 aa14.58□□□□□ -0.08
HMGN3-203ENST00000620514 RRM2P31350 389 aa14.58□□□□□ -0.08
HMGN3-203ENST00000620514 THBS2P35442 1172 aa14.58□□□□□ -0.08
HMGN3-203ENST00000620514 RPS6KA3P51812 740 aa14.58□□□□□ -0.08
HMGN3-203ENST00000620514 SMIM11AP58511 58 aa14.58□□□□□ -0.08
HMGN3-203ENST00000620514 TEKQ02763 1124 aa14.58□□□□□ -0.08
HMGN3-203ENST00000620514 PSG7Q13046 419 aa14.58□□□□□ -0.08
HMGN3-203ENST00000620514 AQP6Q13520 282 aa14.58□□□□□ -0.08
HMGN3-203ENST00000620514 KRTAP24-1Q3LI83 254 aa14.58□□□□□ -0.08
HMGN3-203ENST00000620514 CCDC92Q53HC0 331 aaPredicted RBP14.58□□□□□ -0.08
HMGN3-203ENST00000620514 RINLQ6ZS11 566 aa14.58□□□□□ -0.08
HMGN3-203ENST00000620514 ADCK1Q86TW2 530 aa14.58□□□□□ -0.08
HMGN3-203ENST00000620514 GLCCI1Q86VQ1 547 aa14.58□□□□□ -0.08
HMGN3-203ENST00000620514 C1orf174Q8IYL3 243 aa14.58□□□□□ -0.08
HMGN3-203ENST00000620514 FANK1Q8TC84 345 aa14.58□□□□□ -0.08
HMGN3-203ENST00000620514 MCUR1Q96AQ8 359 aa14.58□□□□□ -0.08
HMGN3-203ENST00000620514 ERMAPQ96PL5 475 aaPredicted RBP14.58□□□□□ -0.08
HMGN3-203ENST00000620514 OR52D1Q9H346 318 aa14.58□□□□□ -0.08
HMGN3-203ENST00000620514 MSL2Q9HCI7 577 aa14.58□□□□□ -0.08
HMGN3-203ENST00000620514 PLEK2Q9NYT0 353 aa14.58□□□□□ -0.08
HMGN3-203ENST00000620514 KLHL21Q9UJP4 597 aa14.58□□□□□ -0.08
HMGN3-203ENST00000620514 GRIP1Q9Y3R0 1128 aa14.58□□□□□ -0.08
HMGN3-203ENST00000620514 H3BSA7 217 aa14.57□□□□□ -0.08
HMGN3-203ENST00000620514 OR10H3O60404 316 aa14.57□□□□□ -0.08
HMGN3-203ENST00000620514 DCTN3O75935 186 aa14.57□□□□□ -0.08
HMGN3-203ENST00000620514 RBMXP38159 391 aaKnown RBP14.57□□□□□ -0.08
HMGN3-203ENST00000620514 CENPAP49450 140 aa14.57□□□□□ -0.08
HMGN3-203ENST00000620514 LSM6P62312 80 aaKnown RBP14.57□□□□□ -0.08
HMGN3-203ENST00000620514 MXRA7P84157 204 aa14.57□□□□□ -0.08
HMGN3-203ENST00000620514 MEP1BQ16820 701 aa14.57□□□□□ -0.08
HMGN3-203ENST00000620514 RFX4Q33E94 735 aa14.57□□□□□ -0.08
HMGN3-203ENST00000620514 FAM209AQ5JX71 171 aa14.57□□□□□ -0.08
HMGN3-203ENST00000620514 C1orf94Q6P1W5 598 aa14.57□□□□□ -0.08
HMGN3-203ENST00000620514 ARL9Q6T311 187 aa14.57□□□□□ -0.08
HMGN3-203ENST00000620514 C16orf89Q6UX73 402 aa14.57□□□□□ -0.08
HMGN3-203ENST00000620514 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.57□□□□□ -0.08
HMGN3-203ENST00000620514 ELMOD3Q96FG2 381 aa14.57□□□□□ -0.08
HMGN3-203ENST00000620514 TBCCD1Q9NVR7 557 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms