RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 POM121L1PQ3SYA9 428 aa9.39□□□□□ -0.91
VPS11-207ENST00000620429 C2orf73Q8N5S3 287 aaPredicted RBP9.39□□□□□ -0.91
VPS11-207ENST00000620429 COMMD1Q8N668 190 aa9.39□□□□□ -0.91
VPS11-207ENST00000620429 RNASE8Q8TDE3 154 aaKnown RBP9.39□□□□□ -0.91
VPS11-207ENST00000620429 SEC22AQ96IW7 307 aa9.39□□□□□ -0.91
VPS11-207ENST00000620429 STACQ99469 402 aa9.39□□□□□ -0.91
VPS11-207ENST00000620429 RAB33BQ9H082 229 aa9.39□□□□□ -0.91
VPS11-207ENST00000620429 TRPV4Q9HBA0 871 aa9.39□□□□□ -0.91
VPS11-207ENST00000620429 HINT3Q9NQE9 182 aaKnown RBP9.39□□□□□ -0.91
VPS11-207ENST00000620429 POT1Q9NUX5 634 aa9.39□□□□□ -0.91
VPS11-207ENST00000620429 P2RX2Q9UBL9 471 aa9.39□□□□□ -0.91
VPS11-207ENST00000620429 SHPKQ9UHJ6 478 aa9.39□□□□□ -0.91
VPS11-207ENST00000620429 A0A087WUU8 490 aa9.38□□□□□ -0.91
VPS11-207ENST00000620429 GCGP01275 180 aa9.38□□□□□ -0.91
VPS11-207ENST00000620429 CTSLP07711 333 aa9.38□□□□□ -0.91
VPS11-207ENST00000620429 GSTP1P09211 210 aaKnown RBP9.38□□□□□ -0.91
VPS11-207ENST00000620429 IFNGR2P38484 337 aa9.38□□□□□ -0.91
VPS11-207ENST00000620429 PDX1P52945 283 aa9.38□□□□□ -0.91
VPS11-207ENST00000620429 SLC9A5Q14940 896 aa9.38□□□□□ -0.91
VPS11-207ENST00000620429 ARHGAP19Q14CB8 494 aa9.38□□□□□ -0.91
VPS11-207ENST00000620429 TMEM215Q68D42 235 aa9.38□□□□□ -0.91
VPS11-207ENST00000620429 ZNF529Q6P280 563 aa9.38□□□□□ -0.91
VPS11-207ENST00000620429 SLC22A25Q6T423 547 aa9.38□□□□□ -0.91
VPS11-207ENST00000620429 NAXEQ8NCW5 288 aa9.38□□□□□ -0.91
VPS11-207ENST00000620429 CYB5D2Q8WUJ1 264 aa9.38□□□□□ -0.91
VPS11-207ENST00000620429 RGP1Q92546 391 aaPredicted RBP9.38□□□□□ -0.91
VPS11-207ENST00000620429 WDR34Q96EX3 536 aa9.38□□□□□ -0.91
VPS11-207ENST00000620429 DTD2Q96FN9 168 aa9.38□□□□□ -0.91
VPS11-207ENST00000620429 PRRC1Q96M27 445 aa9.38□□□□□ -0.91
VPS11-207ENST00000620429 SLC25A21Q9BQT8 299 aaPredicted RBP9.38□□□□□ -0.91
VPS11-207ENST00000620429 NEUROD4Q9HD90 331 aa9.38□□□□□ -0.91
VPS11-207ENST00000620429 SIRT3Q9NTG7 399 aaPredicted RBP9.38□□□□□ -0.91
VPS11-207ENST00000620429 SLCO1B1Q9Y6L6 691 aa9.38□□□□□ -0.91
VPS11-207ENST00000620429 V9GYS6 101 aa9.38□□□□□ -0.91
VPS11-207ENST00000620429 A0A087WZY1 265 aa9.38□□□□□ -0.91
VPS11-207ENST00000620429 TVP23AA6NH52 213 aa9.38□□□□□ -0.91
VPS11-207ENST00000620429 FAM171A2A8MVW0 826 aa9.38□□□□□ -0.91
VPS11-207ENST00000620429 ALPPL2P10696 532 aa9.38□□□□□ -0.91
VPS11-207ENST00000620429 ST6GAL1P15907 406 aa9.38□□□□□ -0.91
VPS11-207ENST00000620429 POLR2LP62875 67 aaKnown RBP9.38□□□□□ -0.91
VPS11-207ENST00000620429 DHRS2Q13268 280 aa9.38□□□□□ -0.91
VPS11-207ENST00000620429 PGGHGQ32M88 737 aa9.38□□□□□ -0.91
VPS11-207ENST00000620429 OR2T2Q6IF00 324 aa9.38□□□□□ -0.91
VPS11-207ENST00000620429 ZNF774Q6NX45 483 aa9.38□□□□□ -0.91
VPS11-207ENST00000620429 GKN2Q86XP6 184 aa9.38□□□□□ -0.91
VPS11-207ENST00000620429 TRAPPC5Q8IUR0 188 aa9.38□□□□□ -0.91
VPS11-207ENST00000620429 FAM210BQ96KR6 192 aa9.38□□□□□ -0.91
VPS11-207ENST00000620429 SAMD8Q96LT4 415 aa9.38□□□□□ -0.91
VPS11-207ENST00000620429 GFI1Q99684 422 aa9.38□□□□□ -0.91
VPS11-207ENST00000620429 SCRT1Q9BWW7 348 aa9.38□□□□□ -0.91
VPS11-207ENST00000620429 AHSPQ9NZD4 102 aa9.38□□□□□ -0.91
VPS11-207ENST00000620429 SLC23A2Q9UGH3 650 aa9.38□□□□□ -0.91
VPS11-207ENST00000620429 CHRNA9Q9UGM1 479 aa9.38□□□□□ -0.91
VPS11-207ENST00000620429 ST6GALNAC2Q9UJ37 374 aa9.38□□□□□ -0.91
VPS11-207ENST00000620429 ETV7Q9Y603 341 aa9.38□□□□□ -0.91
VPS11-207ENST00000620429 A0A1W2PPK0 400 aa9.37□□□□□ -0.91
VPS11-207ENST00000620429 PLPP1O14494 284 aa9.37□□□□□ -0.91
VPS11-207ENST00000620429 AGPAT2O15120 278 aa9.37□□□□□ -0.91
VPS11-207ENST00000620429 NTN1O95631 604 aa9.37□□□□□ -0.91
VPS11-207ENST00000620429 PRLHRP49683 370 aa9.37□□□□□ -0.91
VPS11-207ENST00000620429 UCP2P55851 309 aa9.37□□□□□ -0.91
VPS11-207ENST00000620429 TAS2R41P59536 307 aa9.37□□□□□ -0.91
VPS11-207ENST00000620429 RPS15P62841 145 aaKnown RBP9.37□□□□□ -0.91
VPS11-207ENST00000620429 SSBP1Q04837 148 aaKnown RBP9.37□□□□□ -0.91
VPS11-207ENST00000620429 ABLIM2Q6H8Q1 611 aa9.37□□□□□ -0.91
VPS11-207ENST00000620429 SLC25A24Q6NUK1 477 aa9.37□□□□□ -0.91
VPS11-207ENST00000620429 UNQ9370/PRO34162Q6UXP9 181 aa9.37□□□□□ -0.91
VPS11-207ENST00000620429 ZNF620Q6ZNG0 422 aa9.37□□□□□ -0.91
VPS11-207ENST00000620429 TTLL10Q6ZVT0 673 aa9.37□□□□□ -0.91
VPS11-207ENST00000620429 MEPCEQ7L2J0 689 aaKnown RBP9.37□□□□□ -0.91
VPS11-207ENST00000620429 CPOQ8IVL8 374 aa9.37□□□□□ -0.91
VPS11-207ENST00000620429 ACOT4Q8N9L9 421 aa9.37□□□□□ -0.91
VPS11-207ENST00000620429 OR52N4Q8NGI2 321 aa9.37□□□□□ -0.91
VPS11-207ENST00000620429 FAM46AQ96IP4 442 aaKnown RBP9.37□□□□□ -0.91
VPS11-207ENST00000620429 SLC35G5Q96KT7 338 aa9.37□□□□□ -0.91
VPS11-207ENST00000620429 C4orf36Q96KX1 117 aa9.37□□□□□ -0.91
VPS11-207ENST00000620429 TBX5Q99593 518 aa9.37□□□□□ -0.91
VPS11-207ENST00000620429 SGPP1Q9BX95 441 aa9.37□□□□□ -0.91
VPS11-207ENST00000620429 SRMSQ9H3Y6 488 aa9.37□□□□□ -0.91
VPS11-207ENST00000620429 GRHPRQ9UBQ7 328 aa9.37□□□□□ -0.91
VPS11-207ENST00000620429 OR5V1Q9UGF6 321 aa9.37□□□□□ -0.91
VPS11-207ENST00000620429 WNT6Q9Y6F9 365 aa9.37□□□□□ -0.91
VPS11-207ENST00000620429 PTPRSQ13332 1948 aa9.37□□□□□ -0.91
VPS11-207ENST00000620429 TCRBV21S2A2A0A5A6 115 aa9.37□□□□□ -0.91
VPS11-207ENST00000620429 TMEM235A6NFC5 223 aa9.37□□□□□ -0.91
VPS11-207ENST00000620429 A6NNC1 897 aa9.37□□□□□ -0.91
VPS11-207ENST00000620429 UMAD1C9J7I0 102 aa9.37□□□□□ -0.91
VPS11-207ENST00000620429 CA11O75493 328 aa9.37□□□□□ -0.91
VPS11-207ENST00000620429 EPPINO95925 133 aa9.37□□□□□ -0.91
VPS11-207ENST00000620429 APODP05090 189 aa9.37□□□□□ -0.91
VPS11-207ENST00000620429 TBPP20226 339 aa9.37□□□□□ -0.91
VPS11-207ENST00000620429 PSMB6P28072 239 aa9.37□□□□□ -0.91
VPS11-207ENST00000620429 PRKAG1P54619 331 aa9.37□□□□□ -0.91
VPS11-207ENST00000620429 TAS2R19P59542 299 aa9.37□□□□□ -0.91
VPS11-207ENST00000620429 RAP1BP61224 184 aa9.37□□□□□ -0.91
VPS11-207ENST00000620429 LY6G5CQ5SRR4 150 aa9.37□□□□□ -0.91
VPS11-207ENST00000620429 PRAMEF17Q5VTA0 474 aa9.37□□□□□ -0.91
VPS11-207ENST00000620429 KHDRBS2Q5VWX1 349 aaKnown RBP9.37□□□□□ -0.91
VPS11-207ENST00000620429 NIPAL3Q6P499 406 aa9.37□□□□□ -0.91
VPS11-207ENST00000620429 OR9A1PQ8NGU1 263 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms