RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 SMN1Q16637 294 aaKnown RBP13.59□□□□□ -0.23
PCDHGC3-204ENST00000617222 PCK2Q16822 640 aa13.59□□□□□ -0.23
PCDHGC3-204ENST00000617222 ZNF774Q6NX45 483 aa13.59□□□□□ -0.23
PCDHGC3-204ENST00000617222 SHFQ7M4L6 423 aa13.59□□□□□ -0.23
PCDHGC3-204ENST00000617222 DPY19L4Q7Z388 723 aa13.59□□□□□ -0.23
PCDHGC3-204ENST00000617222 FAM169BQ8N8A8 192 aa13.59□□□□□ -0.23
PCDHGC3-204ENST00000617222 GJC3Q8NFK1 279 aa13.59□□□□□ -0.23
PCDHGC3-204ENST00000617222 OR51G2Q8NGK0 314 aa13.59□□□□□ -0.23
PCDHGC3-204ENST00000617222 RNFT2Q96EX2 444 aa13.59□□□□□ -0.23
PCDHGC3-204ENST00000617222 MS4A3Q96HJ5 214 aa13.59□□□□□ -0.23
PCDHGC3-204ENST00000617222 ZNF75AQ96N20 296 aa13.59□□□□□ -0.23
PCDHGC3-204ENST00000617222 CNN2Q99439 309 aaKnown RBP13.59□□□□□ -0.23
PCDHGC3-204ENST00000617222 ANKRD60Q9BZ19 345 aa13.59□□□□□ -0.23
PCDHGC3-204ENST00000617222 SLC24A3Q9HC58 644 aa13.59□□□□□ -0.23
PCDHGC3-204ENST00000617222 IGHV1-18A0A0C4DH31 117 aa13.58□□□□□ -0.24
PCDHGC3-204ENST00000617222 DPRXA6NFQ7 191 aa13.58□□□□□ -0.24
PCDHGC3-204ENST00000617222 APOL3O95236 402 aa13.58□□□□□ -0.24
PCDHGC3-204ENST00000617222 IGKV3-15P01624 115 aa13.58□□□□□ -0.24
PCDHGC3-204ENST00000617222 IGLV1-44P01699 117 aa13.58□□□□□ -0.24
PCDHGC3-204ENST00000617222 SERPINA5P05154 406 aa13.58□□□□□ -0.24
PCDHGC3-204ENST00000617222 MYF6P23409 242 aa13.58□□□□□ -0.24
PCDHGC3-204ENST00000617222 ATP6V1E1P36543 226 aa13.58□□□□□ -0.24
PCDHGC3-204ENST00000617222 MTNR1AP48039 350 aa13.58□□□□□ -0.24
PCDHGC3-204ENST00000617222 HIST1H3AP68431 136 aa13.58□□□□□ -0.24
PCDHGC3-204ENST00000617222 CCDC92Q53HC0 331 aaPredicted RBP13.58□□□□□ -0.24
PCDHGC3-204ENST00000617222 HIST2H3PS2Q5TEC6 136 aa13.58□□□□□ -0.24
PCDHGC3-204ENST00000617222 HIST2H3AQ71DI3 136 aa13.58□□□□□ -0.24
PCDHGC3-204ENST00000617222 SLC16A9Q7RTY1 509 aa13.58□□□□□ -0.24
PCDHGC3-204ENST00000617222 DCXRQ7Z4W1 244 aa13.58□□□□□ -0.24
PCDHGC3-204ENST00000617222 MYPOPQ86VE0 399 aaPredicted RBP13.58□□□□□ -0.24
PCDHGC3-204ENST00000617222 ALDH16A1Q8IZ83 802 aa13.58□□□□□ -0.24
PCDHGC3-204ENST00000617222 CPEB3Q8NE35 698 aaKnown RBP13.58□□□□□ -0.24
PCDHGC3-204ENST00000617222 FBLIM1Q8WUP2 373 aa13.58□□□□□ -0.24
PCDHGC3-204ENST00000617222 MAP6Q96JE9 813 aa13.58□□□□□ -0.24
PCDHGC3-204ENST00000617222 CNBD2Q96M20 576 aa13.58□□□□□ -0.24
PCDHGC3-204ENST00000617222 ADGRL4Q9HBW9 690 aa13.58□□□□□ -0.24
PCDHGC3-204ENST00000617222 MOV10Q9HCE1 1003 aaKnown RBP13.58□□□□□ -0.24
PCDHGC3-204ENST00000617222 PLEK2Q9NYT0 353 aa13.58□□□□□ -0.24
PCDHGC3-204ENST00000617222 RPL36Q9Y3U8 105 aaKnown RBP13.58□□□□□ -0.24
PCDHGC3-204ENST00000617222 DOPEY2Q9Y3R5 2298 aa13.58□□□□□ -0.24
PCDHGC3-204ENST00000617222 IQCMA0A1B0GVH7 501 aa13.57□□□□□ -0.24
PCDHGC3-204ENST00000617222 DEFB108AA8MXU0 73 aa13.57□□□□□ -0.24
PCDHGC3-204ENST00000617222 SIAH2O43255 324 aa13.57□□□□□ -0.24
PCDHGC3-204ENST00000617222 SGCEO43556 437 aa13.57□□□□□ -0.24
PCDHGC3-204ENST00000617222 SBK2P0C263 348 aa13.57□□□□□ -0.24
PCDHGC3-204ENST00000617222 CECR9P0C854 216 aa13.57□□□□□ -0.24
PCDHGC3-204ENST00000617222 ZNF14P17017 642 aaPredicted RBP13.57□□□□□ -0.24
PCDHGC3-204ENST00000617222 CD40P25942 277 aa13.57□□□□□ -0.24
PCDHGC3-204ENST00000617222 APEX1P27695 318 aaKnown RBP13.57□□□□□ -0.24
PCDHGC3-204ENST00000617222 ZNF91Q05481 1191 aa13.57□□□□□ -0.24
PCDHGC3-204ENST00000617222 POU4F2Q12837 409 aa13.57□□□□□ -0.24
PCDHGC3-204ENST00000617222 EIF2B1Q14232 305 aaKnown RBP13.57□□□□□ -0.24
PCDHGC3-204ENST00000617222 DAZAP2Q15038 168 aaPredicted RBP13.57□□□□□ -0.24
PCDHGC3-204ENST00000617222 BEX5Q5H9J7 111 aa13.57□□□□□ -0.24
PCDHGC3-204ENST00000617222 NCMAPQ5T1S8 102 aa13.57□□□□□ -0.24
PCDHGC3-204ENST00000617222 LAIR2Q6ISS4 152 aa13.57□□□□□ -0.24
PCDHGC3-204ENST00000617222 CFAP77Q6ZQR2 320 aa13.57□□□□□ -0.24
PCDHGC3-204ENST00000617222 VASH1Q7L8A9 365 aaPredicted RBP13.57□□□□□ -0.24
PCDHGC3-204ENST00000617222 CDC20BQ86Y33 519 aa13.57□□□□□ -0.24
PCDHGC3-204ENST00000617222 ZNF584Q8IVC4 421 aa13.57□□□□□ -0.24
PCDHGC3-204ENST00000617222 ZNF454Q8N9F8 522 aa13.57□□□□□ -0.24
PCDHGC3-204ENST00000617222 OR4F15Q8NGB8 312 aa13.57□□□□□ -0.24
PCDHGC3-204ENST00000617222 THEM6Q8WUY1 208 aa13.57□□□□□ -0.24
PCDHGC3-204ENST00000617222 PLPPR2Q96GM1 343 aa13.57□□□□□ -0.24
PCDHGC3-204ENST00000617222 YIPF3Q9GZM5 350 aa13.57□□□□□ -0.24
PCDHGC3-204ENST00000617222 C1orf198Q9H425 327 aa13.57□□□□□ -0.24
PCDHGC3-204ENST00000617222 Q9H521 79 aa13.57□□□□□ -0.24
PCDHGC3-204ENST00000617222 KCNN3Q9UGI6 736 aa13.57□□□□□ -0.24
PCDHGC3-204ENST00000617222 FBXL3Q9UKT7 428 aa13.57□□□□□ -0.24
PCDHGC3-204ENST00000617222 TENM4Q6N022 2769 aa13.57□□□□□ -0.24
PCDHGC3-204ENST00000617222 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.56□□□□□ -0.24
PCDHGC3-204ENST00000617222 DOK2O60496 412 aa13.56□□□□□ -0.24
PCDHGC3-204ENST00000617222 PTHP01270 115 aa13.56□□□□□ -0.24
PCDHGC3-204ENST00000617222 DBTP11182 482 aaKnown RBP13.56□□□□□ -0.24
PCDHGC3-204ENST00000617222 CCL2P13500 99 aa13.56□□□□□ -0.24
PCDHGC3-204ENST00000617222 APLNRP35414 380 aa13.56□□□□□ -0.24
PCDHGC3-204ENST00000617222 BSPH1Q075Z2 132 aa13.56□□□□□ -0.24
PCDHGC3-204ENST00000617222 RAB35Q15286 201 aa13.56□□□□□ -0.24
PCDHGC3-204ENST00000617222 C3orf36Q3SXR2 165 aa13.56□□□□□ -0.24
PCDHGC3-204ENST00000617222 ELFN2Q5R3F8 820 aa13.56□□□□□ -0.24
PCDHGC3-204ENST00000617222 TMEM108Q6UXF1 575 aa13.56□□□□□ -0.24
PCDHGC3-204ENST00000617222 SPATC1Q76KD6 591 aa13.56□□□□□ -0.24
PCDHGC3-204ENST00000617222 SLC35F2Q8IXU6 374 aa13.56□□□□□ -0.24
PCDHGC3-204ENST00000617222 OR1F12Q8NHA8 337 aa13.56□□□□□ -0.24
PCDHGC3-204ENST00000617222 OTOSQ8NHW6 89 aa13.56□□□□□ -0.24
PCDHGC3-204ENST00000617222 LGALS12Q96DT0 336 aa13.56□□□□□ -0.24
PCDHGC3-204ENST00000617222 PIK3IP1Q96FE7 263 aa13.56□□□□□ -0.24
PCDHGC3-204ENST00000617222 AMELYQ99218 206 aa13.56□□□□□ -0.24
PCDHGC3-204ENST00000617222 ABHD6Q9BV23 337 aa13.56□□□□□ -0.24
PCDHGC3-204ENST00000617222 ESRP2Q9H6T0 727 aaKnown RBP13.56□□□□□ -0.24
PCDHGC3-204ENST00000617222 CENPMQ9NSP4 180 aa13.56□□□□□ -0.24
PCDHGC3-204ENST00000617222 LAMP5Q9UJQ1 280 aa13.56□□□□□ -0.24
PCDHGC3-204ENST00000617222 COPS3Q9UNS2 423 aa13.56□□□□□ -0.24
PCDHGC3-204ENST00000617222 KLHDC2Q9Y2U9 406 aa13.56□□□□□ -0.24
PCDHGC3-204ENST00000617222 USP9YO00507 2555 aaPredicted RBP13.55□□□□□ -0.24
PCDHGC3-204ENST00000617222 GCN1Q92616 2671 aaKnown RBP13.55□□□□□ -0.24
PCDHGC3-204ENST00000617222 DENRO43583 198 aaKnown RBP13.55□□□□□ -0.24
PCDHGC3-204ENST00000617222 SYNGR3O43761 229 aa13.55□□□□□ -0.24
PCDHGC3-204ENST00000617222 ALOX5APP20292 161 aa13.55□□□□□ -0.24
PCDHGC3-204ENST00000617222 CCNOP22674 350 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms