RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 HOXC5Q00444 222 aa11.6□□□□□ -0.55
TCF4-248ENST00000616053 ETFRF1Q6IPR1 90 aa11.6□□□□□ -0.55
TCF4-248ENST00000616053 SIAH1Q8IUQ4 282 aa11.6□□□□□ -0.55
TCF4-248ENST00000616053 PNPLA1Q8N8W4 532 aa11.6□□□□□ -0.55
TCF4-248ENST00000616053 CMASQ8NFW8 434 aaPredicted RBP11.6□□□□□ -0.55
TCF4-248ENST00000616053 SLC25A43Q8WUT9 341 aaPredicted RBP11.6□□□□□ -0.55
TCF4-248ENST00000616053 SFT2D1Q8WV19 159 aa11.6□□□□□ -0.55
TCF4-248ENST00000616053 DTD2Q96FN9 168 aa11.6□□□□□ -0.55
TCF4-248ENST00000616053 OR4C12Q96R67 309 aa11.6□□□□□ -0.55
TCF4-248ENST00000616053 TMUB1Q9BVT8 246 aa11.6□□□□□ -0.55
TCF4-248ENST00000616053 PLEKHA2Q9HB19 425 aa11.6□□□□□ -0.55
TCF4-248ENST00000616053 DMRT3Q9NQL9 472 aa11.6□□□□□ -0.55
TCF4-248ENST00000616053 HPP00738 406 aa11.6□□□□□ -0.55
TCF4-248ENST00000616053 PMP2P02689 132 aa11.6□□□□□ -0.55
TCF4-248ENST00000616053 OR8G3PP0DMU2 310 aa11.6□□□□□ -0.55
TCF4-248ENST00000616053 C1RLQ9NZP8 487 aa11.6□□□□□ -0.55
TCF4-248ENST00000616053 HMGN2P05204 90 aaKnown RBP11.59□□□□□ -0.55
TCF4-248ENST00000616053 FKBP2P26885 142 aaKnown RBP11.59□□□□□ -0.55
TCF4-248ENST00000616053 CNR2P34972 360 aa11.59□□□□□ -0.55
TCF4-248ENST00000616053 TGFBR1P36897 503 aa11.59□□□□□ -0.55
TCF4-248ENST00000616053 WNT5AP41221 380 aa11.59□□□□□ -0.55
TCF4-248ENST00000616053 FHL5Q5TD97 284 aa11.59□□□□□ -0.55
TCF4-248ENST00000616053 BCORP1Q8N888 145 aa11.59□□□□□ -0.55
TCF4-248ENST00000616053 TMEM212A6NML5 194 aa11.59□□□□□ -0.55
TCF4-248ENST00000616053 HSD17B1P14061 328 aa11.59□□□□□ -0.55
TCF4-248ENST00000616053 THEM4Q5T1C6 240 aa11.59□□□□□ -0.55
TCF4-248ENST00000616053 SLC22A24Q8N4F4 322 aa11.59□□□□□ -0.55
TCF4-248ENST00000616053 PTTG2Q9NZH5 202 aa11.59□□□□□ -0.55
TCF4-248ENST00000616053 SLC17A4Q9Y2C5 497 aa11.59□□□□□ -0.55
TCF4-248ENST00000616053 ALKQ9UM73 1620 aa11.59□□□□□ -0.55
TCF4-248ENST00000616053 TMEM262E9PQX1 116 aa11.59□□□□□ -0.55
TCF4-248ENST00000616053 OR7D2Q96RA2 312 aa11.59□□□□□ -0.55
TCF4-248ENST00000616053 TNFSF11O14788 317 aa11.59□□□□□ -0.55
TCF4-248ENST00000616053 AKR7A3O95154 331 aa11.59□□□□□ -0.55
TCF4-248ENST00000616053 HIST1H1TP22492 207 aaPredicted RBP11.59□□□□□ -0.55
TCF4-248ENST00000616053 CLDN15P56746 228 aa11.59□□□□□ -0.55
TCF4-248ENST00000616053 TIGD3Q6B0B8 471 aa11.59□□□□□ -0.55
TCF4-248ENST00000616053 DPPA4Q7L190 304 aa11.59□□□□□ -0.55
TCF4-248ENST00000616053 MARCH3Q86UD3 253 aa11.59□□□□□ -0.55
TCF4-248ENST00000616053 EIF4E3Q8N5X7 224 aaKnown RBP11.59□□□□□ -0.55
TCF4-248ENST00000616053 TAS2R5Q9NYW4 299 aa11.59□□□□□ -0.55
TCF4-248ENST00000616053 FBXL4Q9UKA2 621 aa11.59□□□□□ -0.55
TCF4-248ENST00000616053 ICAM5Q9UMF0 924 aa11.59□□□□□ -0.55
TCF4-248ENST00000616053 CORINQ9Y5Q5 1042 aa11.59□□□□□ -0.55
TCF4-248ENST00000616053 CDHR4A6H8M9 788 aa11.59□□□□□ -0.55
TCF4-248ENST00000616053 H0YIV9 168 aa11.59□□□□□ -0.55
TCF4-248ENST00000616053 KCNJ10P78508 379 aa11.59□□□□□ -0.55
TCF4-248ENST00000616053 NFATC3Q12968 1075 aa11.59□□□□□ -0.55
TCF4-248ENST00000616053 OR4D1Q15615 310 aa11.59□□□□□ -0.55
TCF4-248ENST00000616053 OR2W3Q7Z3T1 314 aa11.59□□□□□ -0.55
TCF4-248ENST00000616053 RTN4RL1Q86UN2 441 aaPredicted RBP11.59□□□□□ -0.55
TCF4-248ENST00000616053 OR6M1Q8NGM8 313 aa11.59□□□□□ -0.55
TCF4-248ENST00000616053 SORBS1Q9BX66 1292 aaKnown RBP11.59□□□□□ -0.55
TCF4-248ENST00000616053 SLC25A22Q9H936 323 aa11.59□□□□□ -0.55
TCF4-248ENST00000616053 NUBP2Q9Y5Y2 271 aa11.59□□□□□ -0.55
TCF4-248ENST00000616053 CACNG2Q9Y698 323 aa11.59□□□□□ -0.55
TCF4-248ENST00000616053 VAMP3Q15836 100 aa11.59□□□□□ -0.55
TCF4-248ENST00000616053 SOHLH1Q5JUK2 328 aa11.59□□□□□ -0.55
TCF4-248ENST00000616053 FOXO6A8MYZ6 492 aa11.58□□□□□ -0.56
TCF4-248ENST00000616053 CCL21O00585 134 aa11.58□□□□□ -0.56
TCF4-248ENST00000616053 MPGP29372 298 aa11.58□□□□□ -0.56
TCF4-248ENST00000616053 SULT1A1P50225 295 aa11.58□□□□□ -0.56
TCF4-248ENST00000616053 NHLH1Q02575 133 aa11.58□□□□□ -0.56
TCF4-248ENST00000616053 NHLH2Q02577 135 aa11.58□□□□□ -0.56
TCF4-248ENST00000616053 H3F3CQ6NXT2 135 aa11.58□□□□□ -0.56
TCF4-248ENST00000616053 GALNT16Q8N428 558 aa11.58□□□□□ -0.56
TCF4-248ENST00000616053 DDB2Q92466 427 aa11.58□□□□□ -0.56
TCF4-248ENST00000616053 ISG20Q96AZ6 181 aaKnown RBP11.58□□□□□ -0.56
TCF4-248ENST00000616053 MUTYHQ9UIF7 546 aa11.58□□□□□ -0.56
TCF4-248ENST00000616053 TCRBV7S2A1N4TA0A589 114 aa11.58□□□□□ -0.56
TCF4-248ENST00000616053 MPDU1O75352 247 aa11.58□□□□□ -0.56
TCF4-248ENST00000616053 CALCBP10092 127 aa11.58□□□□□ -0.56
TCF4-248ENST00000616053 FPR3P25089 353 aa11.58□□□□□ -0.56
TCF4-248ENST00000616053 TRIP6Q15654 476 aaKnown RBP11.58□□□□□ -0.56
TCF4-248ENST00000616053 SLC35E4Q6ICL7 350 aa11.58□□□□□ -0.56
TCF4-248ENST00000616053 OR2G2Q8NGZ5 317 aa11.58□□□□□ -0.56
TCF4-248ENST00000616053 OR4Q3Q8NH05 313 aa11.58□□□□□ -0.56
TCF4-248ENST00000616053 ADAMTS16Q8TE57 1224 aa11.58□□□□□ -0.56
TCF4-248ENST00000616053 NOX4Q9NPH5 578 aa11.58□□□□□ -0.56
TCF4-248ENST00000616053 CACFD1Q9UGQ2 172 aa11.58□□□□□ -0.56
TCF4-248ENST00000616053 FZR1Q9UM11 496 aa11.58□□□□□ -0.56
TCF4-248ENST00000616053 SLC22A13Q9Y226 551 aa11.58□□□□□ -0.56
TCF4-248ENST00000616053 DXOO77932 396 aaKnown RBP11.58□□□□□ -0.56
TCF4-248ENST00000616053 HTR2CP28335 458 aa11.58□□□□□ -0.56
TCF4-248ENST00000616053 EVI2BP34910 448 aa11.58□□□□□ -0.56
TCF4-248ENST00000616053 MEOX2P50222 304 aa11.58□□□□□ -0.56
TCF4-248ENST00000616053 PTOV1Q86YD1 416 aa11.58□□□□□ -0.56
TCF4-248ENST00000616053 PRSS50Q9UI38 385 aa11.58□□□□□ -0.56
TCF4-248ENST00000616053 ZNF281Q9Y2X9 895 aa11.58□□□□□ -0.56
TCF4-248ENST00000616053 ATP6V1G2-DDX39BF2Z307 99 aa11.58□□□□□ -0.56
TCF4-248ENST00000616053 M0R3E3 92 aa11.58□□□□□ -0.56
TCF4-248ENST00000616053 GPR32O75388 356 aa11.58□□□□□ -0.56
TCF4-248ENST00000616053 FURINP09958 794 aa11.58□□□□□ -0.56
TCF4-248ENST00000616053 OR4E1P0C645 316 aa11.58□□□□□ -0.56
TCF4-248ENST00000616053 PPP3CBP16298 524 aa11.58□□□□□ -0.56
TCF4-248ENST00000616053 NME2P22392 152 aa11.58□□□□□ -0.56
TCF4-248ENST00000616053 MRPL2Q5T653 305 aaKnown RBP11.58□□□□□ -0.56
TCF4-248ENST00000616053 NRARPQ7Z6K4 114 aa11.58□□□□□ -0.56
TCF4-248ENST00000616053 TMEM116Q8NCL8 245 aa11.58□□□□□ -0.56
TCF4-248ENST00000616053 DCTN5Q9BTE1 182 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms