RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 SUSD5O60279 629 aa13.18□□□□□ -0.3
CDH1-213ENST00000612417 NUDT14O95848 222 aa13.18□□□□□ -0.3
CDH1-213ENST00000612417 ITGA5P08648 1049 aa13.18□□□□□ -0.3
CDH1-213ENST00000612417 CD59P13987 128 aa13.18□□□□□ -0.3
CDH1-213ENST00000612417 C4BPBP20851 252 aa13.18□□□□□ -0.3
CDH1-213ENST00000612417 ABCD3P28288 659 aa13.18□□□□□ -0.3
CDH1-213ENST00000612417 SSTR2P30874 369 aa13.18□□□□□ -0.3
CDH1-213ENST00000612417 C5orf46Q6UWT4 87 aa13.18□□□□□ -0.3
CDH1-213ENST00000612417 NAXDQ8IW45 347 aa13.18□□□□□ -0.3
CDH1-213ENST00000612417 MEIOBQ8N635 442 aa13.18□□□□□ -0.3
CDH1-213ENST00000612417 MR1Q95460 341 aa13.18□□□□□ -0.3
CDH1-213ENST00000612417 RBP7Q96R05 134 aa13.18□□□□□ -0.3
CDH1-213ENST00000612417 CMKLR1Q99788 373 aa13.18□□□□□ -0.3
CDH1-213ENST00000612417 ZNF69Q9UC07 566 aa13.18□□□□□ -0.3
CDH1-213ENST00000612417 UBQLN2Q9UHD9 624 aa13.18□□□□□ -0.3
CDH1-213ENST00000612417 TMED7Q9Y3B3 224 aa13.18□□□□□ -0.3
CDH1-213ENST00000612417 CFAP54Q96N23 3096 aa13.18□□□□□ -0.3
CDH1-213ENST00000612417 LOC100289279A0A1B0GTE1 492 aa13.17□□□□□ -0.3
CDH1-213ENST00000612417 VSTM2BA6NLU5 285 aa13.17□□□□□ -0.3
CDH1-213ENST00000612417 C17orf51A8MQB3 221 aa13.17□□□□□ -0.3
CDH1-213ENST00000612417 SHOXO15266 292 aa13.17□□□□□ -0.3
CDH1-213ENST00000612417 FADS1O60427 444 aa13.17□□□□□ -0.3
CDH1-213ENST00000612417 WISP1O95388 367 aa13.17□□□□□ -0.3
CDH1-213ENST00000612417 ZNF806P0C7X5 589 aa13.17□□□□□ -0.3
CDH1-213ENST00000612417 CD37P11049 281 aa13.17□□□□□ -0.3
CDH1-213ENST00000612417 ANXA7P20073 488 aaKnown RBP13.17□□□□□ -0.3
CDH1-213ENST00000612417 CCKBRP32239 447 aa13.17□□□□□ -0.3
CDH1-213ENST00000612417 POU3F4P49335 361 aa13.17□□□□□ -0.3
CDH1-213ENST00000612417 TSPAN5P62079 268 aa13.17□□□□□ -0.3
CDH1-213ENST00000612417 PCGF3Q3KNV8 242 aa13.17□□□□□ -0.3
CDH1-213ENST00000612417 C1orf140Q5VVS0 124 aa13.17□□□□□ -0.3
CDH1-213ENST00000612417 ASPHD2Q6ICH7 369 aa13.17□□□□□ -0.3
CDH1-213ENST00000612417 KCTD18Q6PI47 426 aaPredicted RBP13.17□□□□□ -0.3
CDH1-213ENST00000612417 POMZP3Q6PJE2 187 aa13.17□□□□□ -0.3
CDH1-213ENST00000612417 GRINAQ7Z429 371 aa13.17□□□□□ -0.3
CDH1-213ENST00000612417 ADGRG3Q86Y34 549 aa13.17□□□□□ -0.3
CDH1-213ENST00000612417 OR51D1Q8NGF3 324 aa13.17□□□□□ -0.3
CDH1-213ENST00000612417 OR4C16Q8NGL9 310 aa13.17□□□□□ -0.3
CDH1-213ENST00000612417 OR8K3Q8NH51 312 aa13.17□□□□□ -0.3
CDH1-213ENST00000612417 STK35Q8TDR2 534 aa13.17□□□□□ -0.3
CDH1-213ENST00000612417 GPR119Q8TDV5 335 aa13.17□□□□□ -0.3
CDH1-213ENST00000612417 PMEPA1Q969W9 287 aa13.17□□□□□ -0.3
CDH1-213ENST00000612417 EDEM2Q9BV94 578 aa13.17□□□□□ -0.3
CDH1-213ENST00000612417 CA10Q9NS85 328 aa13.17□□□□□ -0.3
CDH1-213ENST00000612417 PLSCR5A0PG75 271 aa13.17□□□□□ -0.3
CDH1-213ENST00000612417 SLC22A23A1A5C7 686 aa13.17□□□□□ -0.3
CDH1-213ENST00000612417 PLPP3O14495 311 aa13.17□□□□□ -0.3
CDH1-213ENST00000612417 GMFGO60234 142 aa13.17□□□□□ -0.3
CDH1-213ENST00000612417 TOXO94900 526 aa13.17□□□□□ -0.3
CDH1-213ENST00000612417 ONECUT2O95948 504 aa13.17□□□□□ -0.3
CDH1-213ENST00000612417 HLA-DQA2P01906 255 aa13.17□□□□□ -0.3
CDH1-213ENST00000612417 FSTP19883 344 aa13.17□□□□□ -0.3
CDH1-213ENST00000612417 MAP2K6P52564 334 aa13.17□□□□□ -0.3
CDH1-213ENST00000612417 EFNB2P52799 333 aa13.17□□□□□ -0.3
CDH1-213ENST00000612417 GRK1Q15835 563 aa13.17□□□□□ -0.3
CDH1-213ENST00000612417 RAB11BQ15907 218 aa13.17□□□□□ -0.3
CDH1-213ENST00000612417 CSRP2Q16527 193 aa13.17□□□□□ -0.3
CDH1-213ENST00000612417 ODF4Q2M2E3 257 aa13.17□□□□□ -0.3
CDH1-213ENST00000612417 TOR2AQ5JU69 321 aa13.17□□□□□ -0.3
CDH1-213ENST00000612417 SLC35D2Q76EJ3 337 aa13.17□□□□□ -0.3
CDH1-213ENST00000612417 SLC36A1Q7Z2H8 476 aa13.17□□□□□ -0.3
CDH1-213ENST00000612417 OR6N1Q8NGY5 312 aa13.17□□□□□ -0.3
CDH1-213ENST00000612417 FAM3DQ96BQ1 224 aa13.17□□□□□ -0.3
CDH1-213ENST00000612417 SLC25A36Q96CQ1 311 aa13.17□□□□□ -0.3
CDH1-213ENST00000612417 GLTPQ9NZD2 209 aa13.17□□□□□ -0.3
CDH1-213ENST00000612417 CDV3Q9UKY7 258 aaKnown RBP13.17□□□□□ -0.3
CDH1-213ENST00000612417 WDFY3Q8IZQ1 3526 aa13.16□□□□□ -0.3
CDH1-213ENST00000612417 TUBAL3A6NHL2 446 aa13.16□□□□□ -0.3
CDH1-213ENST00000612417 PYCARD-AS1I3L0S3 204 aa13.16□□□□□ -0.3
CDH1-213ENST00000612417 M0R233 179 aa13.16□□□□□ -0.3
CDH1-213ENST00000612417 ADAM10O14672 748 aa13.16□□□□□ -0.3
CDH1-213ENST00000612417 SLC16A7O60669 478 aa13.16□□□□□ -0.3
CDH1-213ENST00000612417 PNPP00491 289 aa13.16□□□□□ -0.3
CDH1-213ENST00000612417 PLGP00747 810 aaPredicted RBP13.16□□□□□ -0.3
CDH1-213ENST00000612417 CTLA4P16410 223 aa13.16□□□□□ -0.3
CDH1-213ENST00000612417 PSMA6P60900 246 aaKnown RBP13.16□□□□□ -0.3
CDH1-213ENST00000612417 SPEM2Q0P670 501 aa13.16□□□□□ -0.3
CDH1-213ENST00000612417 FAM69BQ5VUD6 431 aa13.16□□□□□ -0.3
CDH1-213ENST00000612417 PAPD4Q6PIY7 484 aaKnown RBP13.16□□□□□ -0.3
CDH1-213ENST00000612417 CPEB2Q7Z5Q1 589 aaKnown RBP13.16□□□□□ -0.3
CDH1-213ENST00000612417 BIVMQ86UB2 503 aa13.16□□□□□ -0.3
CDH1-213ENST00000612417 CATSPERDQ86XM0 798 aa13.16□□□□□ -0.3
CDH1-213ENST00000612417 ZNF454Q8N9F8 522 aa13.16□□□□□ -0.3
CDH1-213ENST00000612417 OR6S1Q8NH40 331 aa13.16□□□□□ -0.3
CDH1-213ENST00000612417 THAP3Q8WTV1 239 aaPredicted RBP13.16□□□□□ -0.3
CDH1-213ENST00000612417 SPSB2Q99619 263 aa13.16□□□□□ -0.3
CDH1-213ENST00000612417 TMEM9BQ9NQ34 198 aa13.16□□□□□ -0.3
CDH1-213ENST00000612417 SPEF1Q9Y4P9 236 aa13.16□□□□□ -0.3
CDH1-213ENST00000612417 MAB21L2Q9Y586 359 aa13.16□□□□□ -0.3
CDH1-213ENST00000612417 TEX51A0A1B0GUA7 166 aa13.16□□□□□ -0.3
CDH1-213ENST00000612417 OR2T1O43869 369 aa13.16□□□□□ -0.3
CDH1-213ENST00000612417 OR6A2O95222 327 aa13.16□□□□□ -0.3
CDH1-213ENST00000612417 SPARCP09486 303 aa13.16□□□□□ -0.3
CDH1-213ENST00000612417 RNF4P78317 190 aa13.16□□□□□ -0.3
CDH1-213ENST00000612417 C2orf76Q3KRA6 126 aa13.16□□□□□ -0.3
CDH1-213ENST00000612417 IDO2Q6ZQW0 420 aa13.16□□□□□ -0.3
CDH1-213ENST00000612417 STRADBQ9C0K7 418 aa13.16□□□□□ -0.3
CDH1-213ENST00000612417 SLC26A1Q9H2B4 701 aa13.16□□□□□ -0.3
CDH1-213ENST00000612417 C19orf25Q9UFG5 118 aaPredicted RBP13.16□□□□□ -0.3
CDH1-213ENST00000612417 SLC22A13Q9Y226 551 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms