RNA–Protein interactions for RNA: ENST00000611852.4

CCDC28A-202, Transcript of coiled-coil domain containing 28A, humanhuman

TSL 1 (best) BASIC

Gene CCDC28A, Length 1,505 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-202ENST00000611852 CPOQ8IVL8 374 aa14.31□□□□□ -0.12
CCDC28A-202ENST00000611852 OR10H5Q8NGA6 315 aa14.31□□□□□ -0.12
CCDC28A-202ENST00000611852 OTULINQ96BN8 352 aa14.31□□□□□ -0.12
CCDC28A-202ENST00000611852 PLEKHA8Q96JA3 519 aa14.31□□□□□ -0.12
CCDC28A-202ENST00000611852 CCL19Q99731 98 aa14.31□□□□□ -0.12
CCDC28A-202ENST00000611852 RIBC2Q9H4K1 309 aa14.31□□□□□ -0.12
CCDC28A-202ENST00000611852 HINT3Q9NQE9 182 aaKnown RBP14.31□□□□□ -0.12
CCDC28A-202ENST00000611852 CA10Q9NS85 328 aa14.31□□□□□ -0.12
CCDC28A-202ENST00000611852 FAIMQ9NVQ4 179 aa14.31□□□□□ -0.12
CCDC28A-202ENST00000611852 LAMP3Q9UQV4 416 aa14.31□□□□□ -0.12
CCDC28A-202ENST00000611852 LOC100509620A0A075B734 347 aa14.3□□□□□ -0.12
CCDC28A-202ENST00000611852 TVP23AA6NH52 213 aa14.3□□□□□ -0.12
CCDC28A-202ENST00000611852 RER1O15258 196 aa14.3□□□□□ -0.12
CCDC28A-202ENST00000611852 SGCEO43556 437 aa14.3□□□□□ -0.12
CCDC28A-202ENST00000611852 ANPEPP15144 967 aa14.3□□□□□ -0.12
CCDC28A-202ENST00000611852 TTKP33981 857 aa14.3□□□□□ -0.12
CCDC28A-202ENST00000611852 GGT2P36268 569 aa14.3□□□□□ -0.12
CCDC28A-202ENST00000611852 HIST1H3AP68431 136 aa14.3□□□□□ -0.12
CCDC28A-202ENST00000611852 HIST2H3PS2Q5TEC6 136 aa14.3□□□□□ -0.12
CCDC28A-202ENST00000611852 LINC01590Q5TEZ4 76 aa14.3□□□□□ -0.12
CCDC28A-202ENST00000611852 C12orf73Q69YU5 71 aa14.3□□□□□ -0.12
CCDC28A-202ENST00000611852 KRT80Q6KB66 452 aa14.3□□□□□ -0.12
CCDC28A-202ENST00000611852 HIST2H3AQ71DI3 136 aa14.3□□□□□ -0.12
CCDC28A-202ENST00000611852 OR1J2Q8NGS2 313 aa14.3□□□□□ -0.12
CCDC28A-202ENST00000611852 OR6K6Q8NGW6 343 aa14.3□□□□□ -0.12
CCDC28A-202ENST00000611852 PIGTQ969N2 578 aa14.3□□□□□ -0.12
CCDC28A-202ENST00000611852 EME1Q96AY2 570 aa14.3□□□□□ -0.12
CCDC28A-202ENST00000611852 POM121L2Q96KW2 1035 aa14.3□□□□□ -0.12
CCDC28A-202ENST00000611852 SLC29A1Q99808 456 aa14.3□□□□□ -0.12
CCDC28A-202ENST00000611852 CDH20Q9HBT6 801 aa14.3□□□□□ -0.12
CCDC28A-202ENST00000611852 CYB5R1Q9UHQ9 305 aa14.3□□□□□ -0.12
CCDC28A-202ENST00000611852 COMMD3-BMI1R4GMX3 469 aa14.3□□□□□ -0.12
CCDC28A-202ENST00000611852 DOK2O60496 412 aa14.29□□□□□ -0.12
CCDC28A-202ENST00000611852 CD8AP01732 235 aa14.29□□□□□ -0.12
CCDC28A-202ENST00000611852 COX5BP10606 129 aa14.29□□□□□ -0.12
CCDC28A-202ENST00000611852 ZNF823P16415 610 aa14.29□□□□□ -0.12
CCDC28A-202ENST00000611852 FMO3P31513 532 aa14.29□□□□□ -0.12
CCDC28A-202ENST00000611852 APOBEC3AP31941 199 aaPredicted RBP14.29□□□□□ -0.12
CCDC28A-202ENST00000611852 FABP6P51161 128 aa14.29□□□□□ -0.12
CCDC28A-202ENST00000611852 BLVRAP53004 296 aa14.29□□□□□ -0.12
CCDC28A-202ENST00000611852 EFNB1P98172 346 aa14.29□□□□□ -0.12
CCDC28A-202ENST00000611852 GALK2Q01415 458 aa14.29□□□□□ -0.12
CCDC28A-202ENST00000611852 SNTB2Q13425 540 aaKnown RBP14.29□□□□□ -0.12
CCDC28A-202ENST00000611852 CCDC92Q53HC0 331 aaPredicted RBP14.29□□□□□ -0.12
CCDC28A-202ENST00000611852 SLC18B1Q6NT16 456 aa14.29□□□□□ -0.12
CCDC28A-202ENST00000611852 CORO6Q6QEF8 472 aa14.29□□□□□ -0.12
CCDC28A-202ENST00000611852 ZBTB49Q6ZSB9 765 aa14.29□□□□□ -0.12
CCDC28A-202ENST00000611852 VASH1Q7L8A9 365 aaPredicted RBP14.29□□□□□ -0.12
CCDC28A-202ENST00000611852 DTX2Q86UW9 622 aa14.29□□□□□ -0.12
CCDC28A-202ENST00000611852 LINC00346Q8IVM7 164 aa14.29□□□□□ -0.12
CCDC28A-202ENST00000611852 MUC15Q8N387 334 aa14.29□□□□□ -0.12
CCDC28A-202ENST00000611852 ZNF511Q8NB15 262 aa14.29□□□□□ -0.12
CCDC28A-202ENST00000611852 GJC3Q8NFK1 279 aa14.29□□□□□ -0.12
CCDC28A-202ENST00000611852 MBD6Q96DN6 1003 aa14.29□□□□□ -0.12
CCDC28A-202ENST00000611852 CDADC1Q9BWV3 514 aa14.29□□□□□ -0.12
CCDC28A-202ENST00000611852 PRRG3Q9BZD7 231 aa14.29□□□□□ -0.12
CCDC28A-202ENST00000611852 OR51V1Q9H2C8 321 aa14.29□□□□□ -0.12
CCDC28A-202ENST00000611852 ZNF442Q9H7R0 627 aa14.29□□□□□ -0.12
CCDC28A-202ENST00000611852 WDR76Q9H967 626 aa14.29□□□□□ -0.12
CCDC28A-202ENST00000611852 PLEK2Q9NYT0 353 aa14.29□□□□□ -0.12
CCDC28A-202ENST00000611852 KCNG2Q9UJ96 466 aa14.29□□□□□ -0.12
CCDC28A-202ENST00000611852 SPEF1Q9Y4P9 236 aa14.29□□□□□ -0.12
CCDC28A-202ENST00000611852 ORC6Q9Y5N6 252 aa14.29□□□□□ -0.12
CCDC28A-202ENST00000611852 C5orf49A4QMS7 147 aa14.28□□□□□ -0.12
CCDC28A-202ENST00000611852 SYNGR3O43761 229 aa14.28□□□□□ -0.12
CCDC28A-202ENST00000611852 PRKYO43930 277 aa14.28□□□□□ -0.12
CCDC28A-202ENST00000611852 GLCEO94923 617 aa14.28□□□□□ -0.12
CCDC28A-202ENST00000611852 THBS4P35443 961 aa14.28□□□□□ -0.12
CCDC28A-202ENST00000611852 GDI2P50395 445 aaKnown RBP14.28□□□□□ -0.12
CCDC28A-202ENST00000611852 RAD23AP54725 363 aa14.28□□□□□ -0.12
CCDC28A-202ENST00000611852 ADAM8P78325 824 aa14.28□□□□□ -0.12
CCDC28A-202ENST00000611852 ADIPOQQ15848 244 aa14.28□□□□□ -0.12
CCDC28A-202ENST00000611852 AGAP6Q5VW22 663 aa14.28□□□□□ -0.12
CCDC28A-202ENST00000611852 VHLLQ6RSH7 139 aa14.28□□□□□ -0.12
CCDC28A-202ENST00000611852 CXXC5Q7LFL8 322 aaKnown RBP14.28□□□□□ -0.12
CCDC28A-202ENST00000611852 FBXL14Q8N1E6 418 aa14.28□□□□□ -0.12
CCDC28A-202ENST00000611852 BBS1Q8NFJ9 593 aa14.28□□□□□ -0.12
CCDC28A-202ENST00000611852 TRAF4Q9BUZ4 470 aaPredicted RBP14.28□□□□□ -0.12
CCDC28A-202ENST00000611852 NDRG4Q9ULP0 352 aaKnown RBP14.28□□□□□ -0.12
CCDC28A-202ENST00000611852 MYO9AB2RTY4 2548 aa14.27□□□□□ -0.12
CCDC28A-202ENST00000611852 OR6C6A6NF89 314 aa14.27□□□□□ -0.12
CCDC28A-202ENST00000611852 M0R129 80 aa14.27□□□□□ -0.12
CCDC28A-202ENST00000611852 PRODHO43272 600 aa14.27□□□□□ -0.12
CCDC28A-202ENST00000611852 GPRIN2O60269 458 aa14.27□□□□□ -0.12
CCDC28A-202ENST00000611852 PSKH1P11801 424 aa14.27□□□□□ -0.12
CCDC28A-202ENST00000611852 CCNOP22674 350 aa14.27□□□□□ -0.12
CCDC28A-202ENST00000611852 SLC2A5P22732 501 aa14.27□□□□□ -0.12
CCDC28A-202ENST00000611852 PCSK6P29122 969 aa14.27□□□□□ -0.12
CCDC28A-202ENST00000611852 RPS27P42677 84 aaKnown RBP14.27□□□□□ -0.12
CCDC28A-202ENST00000611852 HTR5AP47898 357 aa14.27□□□□□ -0.12
CCDC28A-202ENST00000611852 RAB35Q15286 201 aa14.27□□□□□ -0.12
CCDC28A-202ENST00000611852 PCK2Q16822 640 aa14.27□□□□□ -0.12
CCDC28A-202ENST00000611852 DEFB113Q30KQ7 82 aa14.27□□□□□ -0.12
CCDC28A-202ENST00000611852 KLHL12Q53G59 568 aa14.27□□□□□ -0.12
CCDC28A-202ENST00000611852 CFAP77Q6ZQR2 320 aa14.27□□□□□ -0.12
CCDC28A-202ENST00000611852 OR2AJ1Q8NGZ0 328 aa14.27□□□□□ -0.12
CCDC28A-202ENST00000611852 TMEM171Q8WVE6 324 aa14.27□□□□□ -0.12
CCDC28A-202ENST00000611852 GRIP2Q9C0E4 1043 aa14.27□□□□□ -0.12
CCDC28A-202ENST00000611852 MARCH7Q9H992 704 aa14.27□□□□□ -0.12
CCDC28A-202ENST00000611852 CBLN4Q9NTU7 201 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms