RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 WDR5BQ86VZ2 330 aa12.96□□□□□ -0.34
PCDHB16-201ENST00000609684 SIGLEC11Q96RL6 698 aa12.96□□□□□ -0.34
PCDHB16-201ENST00000609684 DYNLRB1Q9NP97 96 aa12.96□□□□□ -0.34
PCDHB16-201ENST00000609684 GPR173Q9NS66 373 aa12.96□□□□□ -0.34
PCDHB16-201ENST00000609684 NXPH2O95156 264 aa12.95□□□□□ -0.34
PCDHB16-201ENST00000609684 RNF4P78317 190 aa12.95□□□□□ -0.34
PCDHB16-201ENST00000609684 PRSS41Q7RTY9 318 aa12.95□□□□□ -0.34
PCDHB16-201ENST00000609684 SFTPA1Q8IWL2 248 aa12.95□□□□□ -0.34
PCDHB16-201ENST00000609684 SPACA5Q96QH8 159 aa12.95□□□□□ -0.34
PCDHB16-201ENST00000609684 KIF25Q9UIL4 384 aa12.95□□□□□ -0.34
PCDHB16-201ENST00000609684 LAP3P28838 519 aa12.95□□□□□ -0.34
PCDHB16-201ENST00000609684 RPL35P42766 123 aaKnown RBP12.95□□□□□ -0.34
PCDHB16-201ENST00000609684 ZNF133P52736 654 aaPredicted RBP12.95□□□□□ -0.34
PCDHB16-201ENST00000609684 CATR1Q13166 79 aa12.95□□□□□ -0.34
PCDHB16-201ENST00000609684 ZG16BQ96DA0 208 aa12.95□□□□□ -0.34
PCDHB16-201ENST00000609684 SLAMF7Q9NQ25 335 aa12.95□□□□□ -0.34
PCDHB16-201ENST00000609684 GNG12Q9UBI6 72 aa12.95□□□□□ -0.34
PCDHB16-201ENST00000609684 B3GALT5Q9Y2C3 310 aa12.95□□□□□ -0.34
PCDHB16-201ENST00000609684 OTOL1A6NHN0 477 aaPredicted RBP12.95□□□□□ -0.34
PCDHB16-201ENST00000609684 PHF1O43189 567 aaPredicted RBP12.95□□□□□ -0.34
PCDHB16-201ENST00000609684 IDH3GP51553 393 aaPredicted RBP12.95□□□□□ -0.34
PCDHB16-201ENST00000609684 STAC2Q6ZMT1 411 aa12.95□□□□□ -0.34
PCDHB16-201ENST00000609684 FJX1Q86VR8 437 aa12.95□□□□□ -0.34
PCDHB16-201ENST00000609684 BATF2Q8N1L9 274 aa12.95□□□□□ -0.34
PCDHB16-201ENST00000609684 KIAA1958Q8N8K9 716 aa12.95□□□□□ -0.34
PCDHB16-201ENST00000609684 GCM1Q9NP62 436 aa12.95□□□□□ -0.34
PCDHB16-201ENST00000609684 MBD1Q9UIS9 605 aaPredicted RBP12.95□□□□□ -0.34
PCDHB16-201ENST00000609684 GPR160Q9UJ42 338 aa12.95□□□□□ -0.34
PCDHB16-201ENST00000609684 YBX2Q9Y2T7 364 aaKnown RBP12.95□□□□□ -0.34
PCDHB16-201ENST00000609684 ARFGEF1Q9Y6D6 1849 aa12.95□□□□□ -0.34
PCDHB16-201ENST00000609684 DOCK5Q9H7D0 1870 aa12.95□□□□□ -0.34
PCDHB16-201ENST00000609684 CCSO14618 274 aa12.95□□□□□ -0.34
PCDHB16-201ENST00000609684 IFNA4P05014 189 aa12.95□□□□□ -0.34
PCDHB16-201ENST00000609684 SNRNP70P08621 437 aaKnown RBP12.95□□□□□ -0.34
PCDHB16-201ENST00000609684 CHATP28329 748 aa12.95□□□□□ -0.34
PCDHB16-201ENST00000609684 RAB4BP61018 213 aa12.95□□□□□ -0.34
PCDHB16-201ENST00000609684 SLC17A1Q14916 467 aa12.95□□□□□ -0.34
PCDHB16-201ENST00000609684 TMEM71Q6P5X7 295 aa12.95□□□□□ -0.34
PCDHB16-201ENST00000609684 CCDC74BQ96LY2 380 aa12.95□□□□□ -0.34
PCDHB16-201ENST00000609684 NKX3-1Q99801 234 aaPredicted RBP12.95□□□□□ -0.34
PCDHB16-201ENST00000609684 MED18Q9BUE0 208 aa12.95□□□□□ -0.34
PCDHB16-201ENST00000609684 SCPEP1Q9HB40 452 aa12.95□□□□□ -0.34
PCDHB16-201ENST00000609684 TMEM100Q9NV29 134 aa12.95□□□□□ -0.34
PCDHB16-201ENST00000609684 RNF212BA8MTL3 300 aa12.94□□□□□ -0.34
PCDHB16-201ENST00000609684 SNAPINO95295 136 aa12.94□□□□□ -0.34
PCDHB16-201ENST00000609684 C1QBP02746 253 aa12.94□□□□□ -0.34
PCDHB16-201ENST00000609684 BAK1Q16611 211 aa12.94□□□□□ -0.34
PCDHB16-201ENST00000609684 PHLDA2Q53GA4 152 aa12.94□□□□□ -0.34
PCDHB16-201ENST00000609684 LPCAT3Q6P1A2 487 aa12.94□□□□□ -0.34
PCDHB16-201ENST00000609684 SLC51BQ86UW2 128 aa12.94□□□□□ -0.34
PCDHB16-201ENST00000609684 PFDN5Q99471 154 aa12.94□□□□□ -0.34
PCDHB16-201ENST00000609684 NUDT9Q9BW91 350 aa12.94□□□□□ -0.34
PCDHB16-201ENST00000609684 GPR84Q9NQS5 396 aa12.94□□□□□ -0.34
PCDHB16-201ENST00000609684 DUSP13Q9UII6 198 aa12.94□□□□□ -0.34
PCDHB16-201ENST00000609684 SCGB2A1O75556 95 aa12.94□□□□□ -0.34
PCDHB16-201ENST00000609684 NKX2-2O95096 273 aa12.94□□□□□ -0.34
PCDHB16-201ENST00000609684 SFRP5Q5T4F7 317 aa12.94□□□□□ -0.34
PCDHB16-201ENST00000609684 FAAP20Q6NZ36 180 aa12.94□□□□□ -0.34
PCDHB16-201ENST00000609684 PRSS35Q8N3Z0 413 aa12.94□□□□□ -0.34
PCDHB16-201ENST00000609684 OR52N5Q8NH56 324 aa12.94□□□□□ -0.34
PCDHB16-201ENST00000609684 COX14Q96I36 57 aa12.94□□□□□ -0.34
PCDHB16-201ENST00000609684 OR2A5Q96R48 311 aa12.94□□□□□ -0.34
PCDHB16-201ENST00000609684 MOB1AQ9H8S9 216 aa12.94□□□□□ -0.34
PCDHB16-201ENST00000609684 CTSFQ9UBX1 484 aa12.94□□□□□ -0.34
PCDHB16-201ENST00000609684 MRPS2Q9Y399 296 aaKnown RBP12.94□□□□□ -0.34
PCDHB16-201ENST00000609684 NME1P15531 152 aaKnown RBP12.94□□□□□ -0.34
PCDHB16-201ENST00000609684 COL9A1P20849 921 aa12.94□□□□□ -0.34
PCDHB16-201ENST00000609684 BTN1A1Q13410 526 aa12.94□□□□□ -0.34
PCDHB16-201ENST00000609684 ZNF674Q2M3X9 581 aa12.94□□□□□ -0.34
PCDHB16-201ENST00000609684 FAM109BQ6ICB4 259 aaPredicted RBP12.94□□□□□ -0.34
PCDHB16-201ENST00000609684 RHOUQ7L0Q8 258 aa12.94□□□□□ -0.34
PCDHB16-201ENST00000609684 OR2G2Q8NGZ5 317 aa12.94□□□□□ -0.34
PCDHB16-201ENST00000609684 GPR119Q8TDV5 335 aa12.94□□□□□ -0.34
PCDHB16-201ENST00000609684 MRGPRX4Q96LA9 322 aa12.94□□□□□ -0.34
PCDHB16-201ENST00000609684 SLCO1C1Q9NYB5 712 aa12.94□□□□□ -0.34
PCDHB16-201ENST00000609684 A0A087WUJ7 227 aa12.94□□□□□ -0.34
PCDHB16-201ENST00000609684 NME2P22392 152 aa12.94□□□□□ -0.34
PCDHB16-201ENST00000609684 C1orf53Q5VUE5 145 aa12.94□□□□□ -0.34
PCDHB16-201ENST00000609684 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.94□□□□□ -0.34
PCDHB16-201ENST00000609684 UCN3Q969E3 161 aa12.94□□□□□ -0.34
PCDHB16-201ENST00000609684 JAM3Q9BX67 310 aa12.94□□□□□ -0.34
PCDHB16-201ENST00000609684 CNTNAP3Q9BZ76 1288 aa12.94□□□□□ -0.34
PCDHB16-201ENST00000609684 SRRQ9GZT4 340 aa12.94□□□□□ -0.34
PCDHB16-201ENST00000609684 BIN3Q9NQY0 253 aa12.94□□□□□ -0.34
PCDHB16-201ENST00000609684 MYOTQ9UBF9 498 aa12.94□□□□□ -0.34
PCDHB16-201ENST00000609684 COL11A2P13942 1736 aaPredicted RBP12.93□□□□□ -0.34
PCDHB16-201ENST00000609684 A0A0B4J2E0 115 aa12.93□□□□□ -0.34
PCDHB16-201ENST00000609684 A0A0U1RQK1 487 aa12.93□□□□□ -0.34
PCDHB16-201ENST00000609684 A0A1B0GX12 115 aa12.93□□□□□ -0.34
PCDHB16-201ENST00000609684 M0R135 149 aa12.93□□□□□ -0.34
PCDHB16-201ENST00000609684 SRPXP78539 464 aa12.93□□□□□ -0.34
PCDHB16-201ENST00000609684 FOXF1Q12946 379 aa12.93□□□□□ -0.34
PCDHB16-201ENST00000609684 OR4C3Q8NH37 302 aa12.93□□□□□ -0.34
PCDHB16-201ENST00000609684 CPNE4Q96A23 557 aaPredicted RBP12.93□□□□□ -0.34
PCDHB16-201ENST00000609684 ZNF799Q96GE5 643 aa12.93□□□□□ -0.34
PCDHB16-201ENST00000609684 FAM212BQ9NTI7 297 aaPredicted RBP12.93□□□□□ -0.34
PCDHB16-201ENST00000609684 NECAP2Q9NVZ3 263 aa12.93□□□□□ -0.34
PCDHB16-201ENST00000609684 SIGLEC7Q9Y286 467 aa12.93□□□□□ -0.34
PCDHB16-201ENST00000609684 SHANK3Q9BYB0 1731 aa12.93□□□□□ -0.34
PCDHB16-201ENST00000609684 A0A1W2PPV4 95 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms