RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 FOXL2NBQ6ZUU3 175 aa16.46■□□□□ 0.23
SGMS1-208ENST00000608287 PAQR4Q8N4S7 273 aaPredicted RBP16.46■□□□□ 0.23
SGMS1-208ENST00000608287 OR1J2Q8NGS2 313 aa16.46■□□□□ 0.23
SGMS1-208ENST00000608287 POP5Q969H6 163 aaKnown RBP16.46■□□□□ 0.23
SGMS1-208ENST00000608287 ERMAPQ96PL5 475 aaPredicted RBP16.46■□□□□ 0.23
SGMS1-208ENST00000608287 SUCNR1Q9BXA5 334 aa16.46■□□□□ 0.23
SGMS1-208ENST00000608287 TRIM15Q9C019 465 aa16.46■□□□□ 0.23
SGMS1-208ENST00000608287 LRMDAQ9H2I8 198 aa16.46■□□□□ 0.23
SGMS1-208ENST00000608287 OR52D1Q9H346 318 aa16.46■□□□□ 0.23
SGMS1-208ENST00000608287 TMEM129A0AVI4 362 aa16.45■□□□□ 0.22
SGMS1-208ENST00000608287 FAM157BP0CG42 384 aa16.45■□□□□ 0.22
SGMS1-208ENST00000608287 MSR1P21757 451 aa16.45■□□□□ 0.22
SGMS1-208ENST00000608287 GSSP48637 474 aa16.45■□□□□ 0.22
SGMS1-208ENST00000608287 HMGA2P52926 109 aa16.45■□□□□ 0.22
SGMS1-208ENST00000608287 TRAP1Q12931 704 aaKnown RBP16.45■□□□□ 0.22
SGMS1-208ENST00000608287 FOXL1Q12952 345 aa16.45■□□□□ 0.22
SGMS1-208ENST00000608287 TSPAN31Q12999 210 aa16.45■□□□□ 0.22
SGMS1-208ENST00000608287 PGBD2Q6P3X8 592 aa16.45■□□□□ 0.22
SGMS1-208ENST00000608287 ADCK1Q86TW2 530 aa16.45■□□□□ 0.22
SGMS1-208ENST00000608287 ZNF786Q8N393 782 aa16.45■□□□□ 0.22
SGMS1-208ENST00000608287 CPEB3Q8NE35 698 aaKnown RBP16.45■□□□□ 0.22
SGMS1-208ENST00000608287 OR9Q2Q8NGE9 314 aa16.45■□□□□ 0.22
SGMS1-208ENST00000608287 AKR7LQ8NHP1 331 aa16.45■□□□□ 0.22
SGMS1-208ENST00000608287 MRPL24Q96A35 216 aaKnown RBP16.45■□□□□ 0.22
SGMS1-208ENST00000608287 SAMD8Q96LT4 415 aa16.45■□□□□ 0.22
SGMS1-208ENST00000608287 DOK1Q99704 481 aa16.45■□□□□ 0.22
SGMS1-208ENST00000608287 MRPL37Q9BZE1 423 aaKnown RBP16.45■□□□□ 0.22
SGMS1-208ENST00000608287 SYT4Q9H2B2 425 aa16.45■□□□□ 0.22
SGMS1-208ENST00000608287 OR51B6Q9H340 312 aa16.45■□□□□ 0.22
SGMS1-208ENST00000608287 DYNLRB1Q9NP97 96 aa16.45■□□□□ 0.22
SGMS1-208ENST00000608287 POLE4Q9NR33 117 aa16.45■□□□□ 0.22
SGMS1-208ENST00000608287 FZR1Q9UM11 496 aa16.45■□□□□ 0.22
SGMS1-208ENST00000608287 ZNF281Q9Y2X9 895 aa16.45■□□□□ 0.22
SGMS1-208ENST00000608287 IMPA2O14732 288 aa16.44■□□□□ 0.22
SGMS1-208ENST00000608287 ACOT8O14734 319 aa16.44■□□□□ 0.22
SGMS1-208ENST00000608287 SLC16A7O60669 478 aa16.44■□□□□ 0.22
SGMS1-208ENST00000608287 CCNB2O95067 398 aa16.44■□□□□ 0.22
SGMS1-208ENST00000608287 TXNDC12O95881 172 aa16.44■□□□□ 0.22
SGMS1-208ENST00000608287 CTLA4P16410 223 aa16.44■□□□□ 0.22
SGMS1-208ENST00000608287 CCNOP22674 350 aa16.44■□□□□ 0.22
SGMS1-208ENST00000608287 STOMP27105 288 aa16.44■□□□□ 0.22
SGMS1-208ENST00000608287 IL2RGP31785 369 aa16.44■□□□□ 0.22
SGMS1-208ENST00000608287 PCBD1P61457 104 aa16.44■□□□□ 0.22
SGMS1-208ENST00000608287 PSG4Q00888 419 aa16.44■□□□□ 0.22
SGMS1-208ENST00000608287 PPP1R8Q12972 351 aaKnown RBP16.44■□□□□ 0.22
SGMS1-208ENST00000608287 MSMPQ1L6U9 139 aa16.44■□□□□ 0.22
SGMS1-208ENST00000608287 OR2T5Q6IEZ7 315 aa16.44■□□□□ 0.22
SGMS1-208ENST00000608287 TREML4Q6UXN2 200 aa16.44■□□□□ 0.22
SGMS1-208ENST00000608287 PTCHD4Q6ZW05 846 aa16.44■□□□□ 0.22
SGMS1-208ENST00000608287 LINC00471Q8N535 108 aa16.44■□□□□ 0.22
SGMS1-208ENST00000608287 OR2T29Q8NH02 315 aa16.44■□□□□ 0.22
SGMS1-208ENST00000608287 TMEM186Q96B77 213 aa16.44■□□□□ 0.22
SGMS1-208ENST00000608287 SYT3Q9BQG1 590 aa16.44■□□□□ 0.22
SGMS1-208ENST00000608287 BTBD10Q9BSF8 475 aa16.44■□□□□ 0.22
SGMS1-208ENST00000608287 IFT27Q9BW83 186 aa16.44■□□□□ 0.22
SGMS1-208ENST00000608287 ZNF416Q9BWM5 594 aa16.44■□□□□ 0.22
SGMS1-208ENST00000608287 REEP1Q9H902 201 aa16.44■□□□□ 0.22
SGMS1-208ENST00000608287 EMC7Q9NPA0 242 aa16.44■□□□□ 0.22
SGMS1-208ENST00000608287 VSX1Q9NZR4 365 aaPredicted RBP16.44■□□□□ 0.22
SGMS1-208ENST00000608287 TIMM10BQ9Y5J6 103 aa16.44■□□□□ 0.22
SGMS1-208ENST00000608287 C12orf71A8MTZ7 269 aa16.43■□□□□ 0.22
SGMS1-208ENST00000608287 KHDRBS3O75525 346 aaKnown RBP16.43■□□□□ 0.22
SGMS1-208ENST00000608287 SNAP29O95721 258 aa16.43■□□□□ 0.22
SGMS1-208ENST00000608287 SCG5P05408 212 aa16.43■□□□□ 0.22
SGMS1-208ENST00000608287 LCKP06239 509 aa16.43■□□□□ 0.22
SGMS1-208ENST00000608287 RAP2AP10114 183 aa16.43■□□□□ 0.22
SGMS1-208ENST00000608287 CDKN2AP42771 156 aaKnown RBP16.43■□□□□ 0.22
SGMS1-208ENST00000608287 ENDOGQ14249 297 aaKnown RBP16.43■□□□□ 0.22
SGMS1-208ENST00000608287 RGS7BPQ6MZT1 257 aaPredicted RBP16.43■□□□□ 0.22
SGMS1-208ENST00000608287 ZNF620Q6ZNG0 422 aa16.43■□□□□ 0.22
SGMS1-208ENST00000608287 JAZF1Q86VZ6 243 aa16.43■□□□□ 0.22
SGMS1-208ENST00000608287 ALDH16A1Q8IZ83 802 aa16.43■□□□□ 0.22
SGMS1-208ENST00000608287 ZCCHC24Q8N2G6 241 aaKnown RBP16.43■□□□□ 0.22
SGMS1-208ENST00000608287 OR4C15Q8NGM1 316 aa16.43■□□□□ 0.22
SGMS1-208ENST00000608287 SLC7A6OSQ96CW6 309 aaPredicted RBP16.43■□□□□ 0.22
SGMS1-208ENST00000608287 OR2H1Q9GZK4 316 aa16.43■□□□□ 0.22
SGMS1-208ENST00000608287 NUAK2Q9H093 628 aa16.43■□□□□ 0.22
SGMS1-208ENST00000608287 HIF1ANQ9NWT6 349 aa16.43■□□□□ 0.22
SGMS1-208ENST00000608287 DUSP13Q9UII6 198 aa16.43■□□□□ 0.22
SGMS1-208ENST00000608287 COA3Q9Y2R0 106 aaPredicted RBP16.43■□□□□ 0.22
SGMS1-208ENST00000608287 SAMHD1Q9Y3Z3 626 aaKnown RBP16.43■□□□□ 0.22
SGMS1-208ENST00000608287 U3KQV3 271 aa16.43■□□□□ 0.22
SGMS1-208ENST00000608287 C5orf49A4QMS7 147 aa16.42■□□□□ 0.22
SGMS1-208ENST00000608287 TFP02787 698 aa16.42■□□□□ 0.22
SGMS1-208ENST00000608287 ADRA2AP08913 450 aa16.42■□□□□ 0.22
SGMS1-208ENST00000608287 EPHA1P21709 976 aa16.42■□□□□ 0.22
SGMS1-208ENST00000608287 NOS3P29474 1203 aa16.42■□□□□ 0.22
SGMS1-208ENST00000608287 RAD52P43351 418 aa16.42■□□□□ 0.22
SGMS1-208ENST00000608287 EVX1P49640 407 aa16.42■□□□□ 0.22
SGMS1-208ENST00000608287 GDI2P50395 445 aaKnown RBP16.42■□□□□ 0.22
SGMS1-208ENST00000608287 UCP2P55851 309 aa16.42■□□□□ 0.22
SGMS1-208ENST00000608287 MIDNQ504T8 468 aa16.42■□□□□ 0.22
SGMS1-208ENST00000608287 LEG1Q6P5S2 330 aa16.42■□□□□ 0.22
SGMS1-208ENST00000608287 LRP11Q86VZ4 500 aa16.42■□□□□ 0.22
SGMS1-208ENST00000608287 GLB1L2Q8IW92 636 aa16.42■□□□□ 0.22
SGMS1-208ENST00000608287 ICA1LQ8NDH6 482 aa16.42■□□□□ 0.22
SGMS1-208ENST00000608287 OR51F2Q8NH61 342 aa16.42■□□□□ 0.22
SGMS1-208ENST00000608287 UBASH3BQ8TF42 649 aa16.42■□□□□ 0.22
SGMS1-208ENST00000608287 WNT5BQ9H1J7 359 aa16.42■□□□□ 0.22
SGMS1-208ENST00000608287 EGLN3Q9H6Z9 239 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms