RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 ZNF69Q9UC07 566 aa12.55□□□□□ -0.4
CTSA-216ENST00000607212 PPP1R3CQ9UQK1 317 aa12.55□□□□□ -0.4
CTSA-216ENST00000607212 HIF3AQ9Y2N7 669 aa12.55□□□□□ -0.4
CTSA-216ENST00000607212 IGHV3OR16-10A0A075B7F0 116 aa12.54□□□□□ -0.4
CTSA-216ENST00000607212 MRASO14807 208 aa12.54□□□□□ -0.4
CTSA-216ENST00000607212 TMPRSS2O15393 492 aa12.54□□□□□ -0.4
CTSA-216ENST00000607212 IGF2P01344 180 aa12.54□□□□□ -0.4
CTSA-216ENST00000607212 ADH4P08319 380 aa12.54□□□□□ -0.4
CTSA-216ENST00000607212 PRTN3P24158 256 aa12.54□□□□□ -0.4
CTSA-216ENST00000607212 GZMMP51124 257 aa12.54□□□□□ -0.4
CTSA-216ENST00000607212 BTG1P62324 171 aa12.54□□□□□ -0.4
CTSA-216ENST00000607212 SCRN3Q0VDG4 424 aa12.54□□□□□ -0.4
CTSA-216ENST00000607212 OAFQ86UD1 273 aa12.54□□□□□ -0.4
CTSA-216ENST00000607212 NRMQ8IXM6 262 aa12.54□□□□□ -0.4
CTSA-216ENST00000607212 OR5AS1Q8N127 324 aa12.54□□□□□ -0.4
CTSA-216ENST00000607212 BCL6BQ8N143 479 aaPredicted RBP12.54□□□□□ -0.4
CTSA-216ENST00000607212 DEFB108BQ8NET1 73 aa12.54□□□□□ -0.4
CTSA-216ENST00000607212 OR8J3Q8NGG0 315 aa12.54□□□□□ -0.4
CTSA-216ENST00000607212 LIPHQ8WWY8 451 aa12.54□□□□□ -0.4
CTSA-216ENST00000607212 LRRC58Q96CX6 371 aa12.54□□□□□ -0.4
CTSA-216ENST00000607212 NMD3Q96D46 503 aaKnown RBP12.54□□□□□ -0.4
CTSA-216ENST00000607212 CMBLQ96DG6 245 aa12.54□□□□□ -0.4
CTSA-216ENST00000607212 SAMD8Q96LT4 415 aa12.54□□□□□ -0.4
CTSA-216ENST00000607212 PRRC1Q96M27 445 aa12.54□□□□□ -0.4
CTSA-216ENST00000607212 NDEL1Q9GZM8 345 aa12.54□□□□□ -0.4
CTSA-216ENST00000607212 POFUT1Q9H488 388 aa12.54□□□□□ -0.4
CTSA-216ENST00000607212 UNKLQ9H9P5 680 aaKnown RBP12.54□□□□□ -0.4
CTSA-216ENST00000607212 ZMAT3Q9HA38 289 aaKnown RBP12.54□□□□□ -0.4
CTSA-216ENST00000607212 PLEK2Q9NYT0 353 aa12.54□□□□□ -0.4
CTSA-216ENST00000607212 GRHPRQ9UBQ7 328 aa12.54□□□□□ -0.4
CTSA-216ENST00000607212 POLR1DQ9Y2S0 133 aa12.54□□□□□ -0.4
CTSA-216ENST00000607212 PPIAL4EA0A075B759 164 aa12.53□□□□□ -0.4
CTSA-216ENST00000607212 PPIAL4CA0A0B4J2A2 164 aa12.53□□□□□ -0.4
CTSA-216ENST00000607212 PPIAL4DF5H284 164 aa12.53□□□□□ -0.4
CTSA-216ENST00000607212 FBP2O00757 339 aa12.53□□□□□ -0.4
CTSA-216ENST00000607212 KCNAB3O43448 404 aa12.53□□□□□ -0.4
CTSA-216ENST00000607212 SGCEO43556 437 aa12.53□□□□□ -0.4
CTSA-216ENST00000607212 GPANK1O95872 356 aa12.53□□□□□ -0.4
CTSA-216ENST00000607212 FSHBP01225 129 aa12.53□□□□□ -0.4
CTSA-216ENST00000607212 PPIAL4FP0DN26 164 aa12.53□□□□□ -0.4
CTSA-216ENST00000607212 ZNF12P17014 697 aa12.53□□□□□ -0.4
CTSA-216ENST00000607212 SEC61A1P61619 476 aaKnown RBP12.53□□□□□ -0.4
CTSA-216ENST00000607212 SF3A3Q12874 501 aaKnown RBP eCLIP12.53□□□□□ -0.42e-9■□□□□ 8.3
CTSA-216ENST00000607212 CDK5R2Q13319 367 aa12.53□□□□□ -0.4
CTSA-216ENST00000607212 ENDOGQ14249 297 aaKnown RBP12.53□□□□□ -0.4
CTSA-216ENST00000607212 TRAM2Q15035 370 aa12.53□□□□□ -0.4
CTSA-216ENST00000607212 TMEM155Q4W5P6 130 aa12.53□□□□□ -0.4
CTSA-216ENST00000607212 BTNL3Q6UXE8 466 aa12.53□□□□□ -0.4
CTSA-216ENST00000607212 ZNF730Q6ZMV8 503 aa12.53□□□□□ -0.4
CTSA-216ENST00000607212 DOK3Q7L591 496 aa12.53□□□□□ -0.4
CTSA-216ENST00000607212 RRM2BQ7LG56 351 aa12.53□□□□□ -0.4
CTSA-216ENST00000607212 MUC20Q8N307 709 aaPredicted RBP12.53□□□□□ -0.4
CTSA-216ENST00000607212 OR52E2Q8NGJ4 325 aa12.53□□□□□ -0.4
CTSA-216ENST00000607212 OR13C2Q8NGS9 318 aa12.53□□□□□ -0.4
CTSA-216ENST00000607212 DVL3Q92997 716 aaPredicted RBP12.53□□□□□ -0.4
CTSA-216ENST00000607212 SLC25A28Q96A46 364 aa12.53□□□□□ -0.4
CTSA-216ENST00000607212 OR2V2Q96R30 315 aa12.53□□□□□ -0.4
CTSA-216ENST00000607212 SIKE1Q9BRV8 207 aa12.53□□□□□ -0.4
CTSA-216ENST00000607212 POLE4Q9NR33 117 aa12.53□□□□□ -0.4
CTSA-216ENST00000607212 INSIG2Q9Y5U4 225 aa12.53□□□□□ -0.4
CTSA-216ENST00000607212 TRAPPC2LH3BP13 241 aa12.52□□□□□ -0.41
CTSA-216ENST00000607212 ZNF205O95201 554 aa12.52□□□□□ -0.41
CTSA-216ENST00000607212 RPS2P15880 293 aaKnown RBP12.52□□□□□ -0.41
CTSA-216ENST00000607212 MDH2P40926 338 aaKnown RBP12.52□□□□□ -0.41
CTSA-216ENST00000607212 MTNR1AP48039 350 aa12.52□□□□□ -0.41
CTSA-216ENST00000607212 CENPAP49450 140 aa12.52□□□□□ -0.41
CTSA-216ENST00000607212 GUCY1A3Q02108 690 aa12.52□□□□□ -0.41
CTSA-216ENST00000607212 GABPB1Q06547 395 aaPredicted RBP12.52□□□□□ -0.41
CTSA-216ENST00000607212 ZMYND11Q15326 602 aa12.52□□□□□ -0.41
CTSA-216ENST00000607212 MAPRE2Q15555 327 aa12.52□□□□□ -0.41
CTSA-216ENST00000607212 SYT9Q86SS6 491 aa12.52□□□□□ -0.41
CTSA-216ENST00000607212 LRRC28Q86X40 367 aaPredicted RBP12.52□□□□□ -0.41
CTSA-216ENST00000607212 CALHM3Q86XJ0 350 aa12.52□□□□□ -0.41
CTSA-216ENST00000607212 ZNF283Q8N7M2 679 aa12.52□□□□□ -0.41
CTSA-216ENST00000607212 PCYOX1LQ8NBM8 494 aa12.52□□□□□ -0.41
CTSA-216ENST00000607212 OR2T12Q8NG77 320 aa12.52□□□□□ -0.41
CTSA-216ENST00000607212 C10orf82Q8WW14 230 aa12.52□□□□□ -0.41
CTSA-216ENST00000607212 STON2Q8WXE9 905 aa12.52□□□□□ -0.41
CTSA-216ENST00000607212 COG8Q96MW5 612 aa12.52□□□□□ -0.41
CTSA-216ENST00000607212 ZNF570Q96NI8 536 aa12.52□□□□□ -0.41
CTSA-216ENST00000607212 TMEM120AQ9BXJ8 343 aa12.52□□□□□ -0.41
CTSA-216ENST00000607212 TBCCD1Q9NVR7 557 aa12.52□□□□□ -0.41
CTSA-216ENST00000607212 GID8Q9NWU2 228 aa12.52□□□□□ -0.41
CTSA-216ENST00000607212 PTTG3PQ9NZH4 202 aa12.52□□□□□ -0.41
CTSA-216ENST00000607212 KLHL21Q9UJP4 597 aa12.52□□□□□ -0.41
CTSA-216ENST00000607212 TENM1Q9UKZ4 2725 aa12.52□□□□□ -0.41
CTSA-216ENST00000607212 HTR3EA5X5Y0 456 aa12.51□□□□□ -0.41
CTSA-216ENST00000607212 FAM220BPB1ANY3 271 aa12.51□□□□□ -0.41
CTSA-216ENST00000607212 HMGB1P1B2RPK0 211 aaPredicted RBP12.51□□□□□ -0.41
CTSA-216ENST00000607212 GSTA4O15217 222 aa12.51□□□□□ -0.41
CTSA-216ENST00000607212 EDF1O60869 148 aaKnown RBP12.51□□□□□ -0.41
CTSA-216ENST00000607212 SASH3O75995 380 aa12.51□□□□□ -0.41
CTSA-216ENST00000607212 ZNF682O95780 498 aa12.51□□□□□ -0.41
CTSA-216ENST00000607212 IFNW1P05000 195 aa12.51□□□□□ -0.41
CTSA-216ENST00000607212 TSPAN19P0C672 248 aa12.51□□□□□ -0.41
CTSA-216ENST00000607212 COX5BP10606 129 aa12.51□□□□□ -0.41
CTSA-216ENST00000607212 TUBG1P23258 451 aa12.51□□□□□ -0.41
CTSA-216ENST00000607212 KDELR2P33947 212 aa12.51□□□□□ -0.41
CTSA-216ENST00000607212 GPR4P46093 362 aa12.51□□□□□ -0.41
CTSA-216ENST00000607212 SLC6A9P48067 706 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms