RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 OR51L1Q8NGJ5 315 aa12.36□□□□□ -0.43
CTSA-211ENST00000606066 OR6K6Q8NGW6 343 aa12.36□□□□□ -0.43
CTSA-211ENST00000606066 OR2AJ1Q8NGZ0 328 aa12.36□□□□□ -0.43
CTSA-211ENST00000606066 AKR7LQ8NHP1 331 aa12.36□□□□□ -0.43
CTSA-211ENST00000606066 SMAP2Q8WU79 429 aaPredicted RBP12.36□□□□□ -0.43
CTSA-211ENST00000606066 PTP4A1Q93096 173 aa12.36□□□□□ -0.43
CTSA-211ENST00000606066 PIGTQ969N2 578 aa12.36□□□□□ -0.43
CTSA-211ENST00000606066 DHRS9Q9BPW9 319 aa12.36□□□□□ -0.43
CTSA-211ENST00000606066 OR51V1Q9H2C8 321 aa12.36□□□□□ -0.43
CTSA-211ENST00000606066 DCLRE1BQ9H816 532 aa12.36□□□□□ -0.43
CTSA-211ENST00000606066 CDH20Q9HBT6 801 aa12.36□□□□□ -0.43
CTSA-211ENST00000606066 PLEK2Q9NYT0 353 aa12.36□□□□□ -0.43
CTSA-211ENST00000606066 NDRG4Q9ULP0 352 aaKnown RBP12.36□□□□□ -0.43
CTSA-211ENST00000606066 ABCA4P78363 2273 aa12.36□□□□□ -0.43
CTSA-211ENST00000606066 E7EQL1 145 aa12.35□□□□□ -0.43
CTSA-211ENST00000606066 H0YHG0 523 aa12.35□□□□□ -0.43
CTSA-211ENST00000606066 PRODHO43272 600 aa12.35□□□□□ -0.43
CTSA-211ENST00000606066 SGCEO43556 437 aa12.35□□□□□ -0.43
CTSA-211ENST00000606066 GLCEO94923 617 aa12.35□□□□□ -0.43
CTSA-211ENST00000606066 SNAP29O95721 258 aa12.35□□□□□ -0.43
CTSA-211ENST00000606066 COX5BP10606 129 aa12.35□□□□□ -0.43
CTSA-211ENST00000606066 CLUP10909 449 aa12.35□□□□□ -0.43
CTSA-211ENST00000606066 EPHA2P29317 976 aa12.35□□□□□ -0.43
CTSA-211ENST00000606066 APOBEC3AP31941 199 aaPredicted RBP12.35□□□□□ -0.43
CTSA-211ENST00000606066 FABP6P51161 128 aa12.35□□□□□ -0.43
CTSA-211ENST00000606066 ADAM8P78325 824 aa12.35□□□□□ -0.43
CTSA-211ENST00000606066 TRIP10Q15642 601 aa12.35□□□□□ -0.43
CTSA-211ENST00000606066 MEP1BQ16820 701 aa12.35□□□□□ -0.43
CTSA-211ENST00000606066 KLHL12Q53G59 568 aa12.35□□□□□ -0.43
CTSA-211ENST00000606066 SLC35D3Q5M8T2 416 aa12.35□□□□□ -0.43
CTSA-211ENST00000606066 C12orf73Q69YU5 71 aa12.35□□□□□ -0.43
CTSA-211ENST00000606066 ZNF774Q6NX45 483 aa12.35□□□□□ -0.43
CTSA-211ENST00000606066 ARL9Q6T311 187 aa12.35□□□□□ -0.43
CTSA-211ENST00000606066 CXXC5Q7LFL8 322 aaKnown RBP12.35□□□□□ -0.43
CTSA-211ENST00000606066 TGIF2LYQ8IUE0 185 aa12.35□□□□□ -0.43
CTSA-211ENST00000606066 CPOQ8IVL8 374 aa12.35□□□□□ -0.43
CTSA-211ENST00000606066 FBXL14Q8N1E6 418 aa12.35□□□□□ -0.43
CTSA-211ENST00000606066 CPEB3Q8NE35 698 aaKnown RBP12.35□□□□□ -0.43
CTSA-211ENST00000606066 NRGNQ92686 78 aa12.35□□□□□ -0.43
CTSA-211ENST00000606066 NEUROG1Q92886 237 aa12.35□□□□□ -0.43
CTSA-211ENST00000606066 CCL19Q99731 98 aa12.35□□□□□ -0.43
CTSA-211ENST00000606066 WNT5BQ9H1J7 359 aa12.35□□□□□ -0.43
CTSA-211ENST00000606066 LIME1Q9H400 295 aa12.35□□□□□ -0.43
CTSA-211ENST00000606066 MED20Q9H944 212 aa12.35□□□□□ -0.43
CTSA-211ENST00000606066 HINT3Q9NQE9 182 aaKnown RBP12.35□□□□□ -0.43
CTSA-211ENST00000606066 CA10Q9NS85 328 aa12.35□□□□□ -0.43
CTSA-211ENST00000606066 H2AFY2Q9P0M6 372 aaPredicted RBP12.35□□□□□ -0.43
CTSA-211ENST00000606066 EIF3KQ9UBQ5 218 aaKnown RBP12.35□□□□□ -0.43
CTSA-211ENST00000606066 TVP23AA6NH52 213 aa12.34□□□□□ -0.43
CTSA-211ENST00000606066 TLX2O43763 284 aaPredicted RBP12.34□□□□□ -0.43
CTSA-211ENST00000606066 DOK2O60496 412 aa12.34□□□□□ -0.43
CTSA-211ENST00000606066 CCNOP22674 350 aa12.34□□□□□ -0.43
CTSA-211ENST00000606066 NR4A1P22736 598 aa12.34□□□□□ -0.43
CTSA-211ENST00000606066 APEX1P27695 318 aaKnown RBP12.34□□□□□ -0.43
CTSA-211ENST00000606066 PCSK6P29122 969 aa12.34□□□□□ -0.43
CTSA-211ENST00000606066 GSTT1P30711 240 aa12.34□□□□□ -0.43
CTSA-211ENST00000606066 TTKP33981 857 aa12.34□□□□□ -0.43
CTSA-211ENST00000606066 GGT2P36268 569 aa12.34□□□□□ -0.43
CTSA-211ENST00000606066 POLR2IP36954 125 aaKnown RBP12.34□□□□□ -0.43
CTSA-211ENST00000606066 RAD52P43351 418 aa12.34□□□□□ -0.43
CTSA-211ENST00000606066 ENTPD1P49961 510 aa12.34□□□□□ -0.43
CTSA-211ENST00000606066 CDC42P60953 191 aa12.34□□□□□ -0.43
CTSA-211ENST00000606066 RPS7P62081 194 aaKnown RBP12.34□□□□□ -0.43
CTSA-211ENST00000606066 RPS23P62266 143 aaKnown RBP12.34□□□□□ -0.43
CTSA-211ENST00000606066 HGFACQ04756 655 aa12.34□□□□□ -0.43
CTSA-211ENST00000606066 AGAP6Q5VW22 663 aa12.34□□□□□ -0.43
CTSA-211ENST00000606066 KRT80Q6KB66 452 aa12.34□□□□□ -0.43
CTSA-211ENST00000606066 ZNF771Q7L3S4 317 aaPredicted RBP12.34□□□□□ -0.43
CTSA-211ENST00000606066 TCEANCQ8N8B7 351 aa12.34□□□□□ -0.43
CTSA-211ENST00000606066 TMEM171Q8WVE6 324 aa12.34□□□□□ -0.43
CTSA-211ENST00000606066 ZNRF4Q8WWF5 429 aa12.34□□□□□ -0.43
CTSA-211ENST00000606066 POM121L2Q96KW2 1035 aa12.34□□□□□ -0.43
CTSA-211ENST00000606066 RDH12Q96NR8 316 aa12.34□□□□□ -0.43
CTSA-211ENST00000606066 SLC29A1Q99808 456 aa12.34□□□□□ -0.43
CTSA-211ENST00000606066 HCAR1Q9BXC0 346 aa12.34□□□□□ -0.43
CTSA-211ENST00000606066 HDHD2Q9H0R4 259 aa12.34□□□□□ -0.43
CTSA-211ENST00000606066 ZNF442Q9H7R0 627 aa12.34□□□□□ -0.43
CTSA-211ENST00000606066 MRPL22Q9NWU5 206 aaKnown RBP12.34□□□□□ -0.43
CTSA-211ENST00000606066 CYB5R1Q9UHQ9 305 aa12.34□□□□□ -0.43
CTSA-211ENST00000606066 ATPIF1Q9UII2 106 aa12.34□□□□□ -0.43
CTSA-211ENST00000606066 PLEKHA6Q9Y2H5 1048 aa12.34□□□□□ -0.43
CTSA-211ENST00000606066 LHFPL6Q9Y693 200 aa12.34□□□□□ -0.43
CTSA-211ENST00000606066 PRRC2AP48634 2157 aaKnown RBP12.34□□□□□ -0.43
CTSA-211ENST00000606066 VPS13CQ709C8 3753 aa12.33□□□□□ -0.43
CTSA-211ENST00000606066 C5orf49A4QMS7 147 aa12.33□□□□□ -0.44
CTSA-211ENST00000606066 ZNF593O00488 134 aaPredicted RBP12.33□□□□□ -0.44
CTSA-211ENST00000606066 RER1O15258 196 aa12.33□□□□□ -0.44
CTSA-211ENST00000606066 PRKYO43930 277 aa12.33□□□□□ -0.44
CTSA-211ENST00000606066 ATE1O95260 518 aa12.33□□□□□ -0.44
CTSA-211ENST00000606066 DANCRP0C864 163 aa12.33□□□□□ -0.44
CTSA-211ENST00000606066 BMP4P12644 408 aa12.33□□□□□ -0.44
CTSA-211ENST00000606066 CCL2P13500 99 aa12.33□□□□□ -0.44
CTSA-211ENST00000606066 GLRXP35754 106 aa12.33□□□□□ -0.44
CTSA-211ENST00000606066 HTR5AP47898 357 aa12.33□□□□□ -0.44
CTSA-211ENST00000606066 HIST1H3AP68431 136 aa12.33□□□□□ -0.44
CTSA-211ENST00000606066 DBPQ10586 325 aaPredicted RBP12.33□□□□□ -0.44
CTSA-211ENST00000606066 ECH1Q13011 328 aa12.33□□□□□ -0.44
CTSA-211ENST00000606066 SNTB2Q13425 540 aaKnown RBP12.33□□□□□ -0.44
CTSA-211ENST00000606066 RAB35Q15286 201 aa12.33□□□□□ -0.44
CTSA-211ENST00000606066 ZIK1Q3SY52 487 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms