RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 GDF2Q9UK05 429 aaPredicted RBP10.86□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 B3GNT3Q9Y2A9 372 aa10.86□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 NOSIPQ9Y314 301 aaKnown RBP10.86□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 PMF1-BGLAPU3KQ54 211 aa10.86□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 APC2O95996 2303 aa10.86□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 SLC22A20A6NK97 555 aa10.85□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 ZFPL1O95159 310 aa10.85□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 MPZL1O95297 269 aa10.85□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 UBCP0CG48 685 aaKnown RBP10.85□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 SPINK2P20155 84 aa10.85□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 SDC2P34741 201 aa10.85□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 TGFBR1P36897 503 aa10.85□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 NANOS3P60323 173 aaKnown RBP10.85□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 Q499Y3 187 aa10.85□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 LRRN1Q6UXK5 716 aa10.85□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 ZNF704Q6ZNC4 412 aaPredicted RBP10.85□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 FGD2Q7Z6J4 655 aa10.85□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 DPPA2Q7Z7J5 298 aa10.85□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 CATSPERDQ86XM0 798 aa10.85□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 MCEMP1Q8IX19 187 aa10.85□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 GPR148Q8TDV2 347 aa10.85□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 ACOT12Q8WYK0 555 aa10.85□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 SLAMF6Q96DU3 332 aa10.85□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 GMPPAQ96IJ6 420 aaPredicted RBP10.85□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 WDFY2Q96P53 400 aa10.85□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 PRRG4Q9BZD6 226 aa10.85□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 DEFB127Q9H1M4 99 aa10.85□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 RNF167Q9H6Y7 350 aa10.85□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 SEC61A2Q9H9S3 476 aa10.85□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 FRRS1LQ9P0K9 344 aa10.85□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 CLCF1Q9UBD9 225 aa10.85□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 POLR1DQ9Y2S0 133 aa10.85□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 GRIP1Q9Y3R0 1128 aa10.85□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 TTLL8A6PVC2 850 aa10.84□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 AHRRA9YTQ3 701 aa10.84□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 CLDN25C9JDP6 229 aa10.84□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 CASKO14936 926 aa10.84□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 SS18L1O75177 396 aaPredicted RBP10.84□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 CDRT1O95170 752 aa10.84□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 CNOT4O95628 575 aaKnown RBP10.84□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 ADRB1P08588 477 aa10.84□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 H2BFMP0C1H6 154 aa10.84□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 S100A5P33763 92 aa10.84□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 PTGER4P35408 488 aa10.84□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 PSMA6P60900 246 aaKnown RBP10.84□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 PCBD1P61457 104 aa10.84□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 SRYQ05066 204 aa10.84□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 SCRN3Q0VDG4 424 aa10.84□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 ECH1Q13011 328 aa10.84□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 ZNF846Q147U1 533 aa10.84□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 EIF2S3LQ2VIR3 472 aaKnown RBP10.84□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 KRTCAP3Q53RY4 240 aa10.84□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 PHYHD1Q5SRE7 291 aa10.84□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 KLHL24Q6TFL4 600 aa10.84□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 CEACAM19Q7Z692 300 aa10.84□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.84□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 RBMXL3Q8N7X1 1067 aaKnown RBP10.84□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 CCDC54Q8NEL0 328 aa10.84□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 FNDC9Q8TBE3 224 aa10.84□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 BORCS5Q969J3 196 aa10.84□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 ITFG2Q969R8 447 aa10.84□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 DCLRE1CQ96SD1 692 aaKnown RBP10.84□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 MRI1Q9BV20 369 aa10.84□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 TTTY10Q9BZA0 68 aa10.84□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 ZCCHC4Q9H5U6 513 aa10.84□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 PLGRKTQ9HBL7 147 aa10.84□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 GPR35Q9HC97 309 aa10.84□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 PNRC2Q9NPJ4 139 aaKnown RBP10.84□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 AKIP1Q9NQ31 210 aa10.84□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 TMEM38BQ9NVV0 291 aa10.84□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 FREM1Q5H8C1 2179 aa10.84□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 A0A087WV48 116 aa10.83□□□□□ -0.68
NEDD8-MDP1-203ENST00000604306 TRBV5-7A0A0A0MS05 114 aa10.83□□□□□ -0.68
NEDD8-MDP1-203ENST00000604306 CD8B2A6NJW9 211 aa10.83□□□□□ -0.68
NEDD8-MDP1-203ENST00000604306 ZNF587BE7ETH6 402 aa10.83□□□□□ -0.68
NEDD8-MDP1-203ENST00000604306 LOC110117498-PIK3R3F6TDL0 507 aa10.83□□□□□ -0.68
NEDD8-MDP1-203ENST00000604306 PDCD5O14737 125 aa10.83□□□□□ -0.68
NEDD8-MDP1-203ENST00000604306 MAGEB4O15481 346 aaPredicted RBP10.83□□□□□ -0.68
NEDD8-MDP1-203ENST00000604306 RPP14O95059 124 aaKnown RBP10.83□□□□□ -0.68
NEDD8-MDP1-203ENST00000604306 FARS2O95363 451 aaKnown RBP10.83□□□□□ -0.68
NEDD8-MDP1-203ENST00000604306 FSTP19883 344 aa10.83□□□□□ -0.68
NEDD8-MDP1-203ENST00000604306 ACHEP22303 614 aa10.83□□□□□ -0.68
NEDD8-MDP1-203ENST00000604306 CFPP27918 469 aa10.83□□□□□ -0.68
NEDD8-MDP1-203ENST00000604306 OTX1P32242 354 aaPredicted RBP10.83□□□□□ -0.68
NEDD8-MDP1-203ENST00000604306 PSMB10P40306 273 aa10.83□□□□□ -0.68
NEDD8-MDP1-203ENST00000604306 PEX19P40855 299 aa10.83□□□□□ -0.68
NEDD8-MDP1-203ENST00000604306 RPS27P42677 84 aaKnown RBP10.83□□□□□ -0.68
NEDD8-MDP1-203ENST00000604306 KIR3DL2P43630 455 aa10.83□□□□□ -0.68
NEDD8-MDP1-203ENST00000604306 PSMD7P51665 324 aa10.83□□□□□ -0.68
NEDD8-MDP1-203ENST00000604306 PMP22Q01453 160 aa10.83□□□□□ -0.68
NEDD8-MDP1-203ENST00000604306 ZNF45Q02386 682 aa10.83□□□□□ -0.68
NEDD8-MDP1-203ENST00000604306 DCTN2Q13561 401 aaKnown RBP10.83□□□□□ -0.68
NEDD8-MDP1-203ENST00000604306 ENDOGQ14249 297 aaKnown RBP10.83□□□□□ -0.68
NEDD8-MDP1-203ENST00000604306 HSD17B12Q53GQ0 312 aa10.83□□□□□ -0.68
NEDD8-MDP1-203ENST00000604306 WDR38Q5JTN6 314 aa10.83□□□□□ -0.68
NEDD8-MDP1-203ENST00000604306 TMEM244Q5VVB8 128 aa10.83□□□□□ -0.68
NEDD8-MDP1-203ENST00000604306 OR2A2Q6IF42 318 aa10.83□□□□□ -0.68
NEDD8-MDP1-203ENST00000604306 OR7E24Q6IFN5 339 aa10.83□□□□□ -0.68
NEDD8-MDP1-203ENST00000604306 PRSS35Q8N3Z0 413 aa10.83□□□□□ -0.68
NEDD8-MDP1-203ENST00000604306 ZNF676Q8N7Q3 588 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms