RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 NKX6-1P78426 367 aaPredicted RBP12.01□□□□□ -0.49
RNF40-212ENST00000602784 DBPQ10586 325 aaPredicted RBP12.01□□□□□ -0.49
RNF40-212ENST00000602784 TRIP10Q15642 601 aa12.01□□□□□ -0.49
RNF40-212ENST00000602784 MEP1BQ16820 701 aa12.01□□□□□ -0.49
RNF40-212ENST00000602784 ZNF774Q6NX45 483 aa12.01□□□□□ -0.49
RNF40-212ENST00000602784 VASH1Q7L8A9 365 aaPredicted RBP12.01□□□□□ -0.49
RNF40-212ENST00000602784 CXXC5Q7LFL8 322 aaKnown RBP12.01□□□□□ -0.49
RNF40-212ENST00000602784 PACRGLQ8N7B6 248 aa12.01□□□□□ -0.49
RNF40-212ENST00000602784 OR51L1Q8NGJ5 315 aa12.01□□□□□ -0.49
RNF40-212ENST00000602784 AKR7LQ8NHP1 331 aa12.01□□□□□ -0.49
RNF40-212ENST00000602784 TMEM163Q8TC26 289 aa12.01□□□□□ -0.49
RNF40-212ENST00000602784 SMAP2Q8WU79 429 aaPredicted RBP12.01□□□□□ -0.49
RNF40-212ENST00000602784 TRUB1Q8WWH5 349 aaKnown RBP12.01□□□□□ -0.49
RNF40-212ENST00000602784 IGFBPL1Q8WX77 278 aa12.01□□□□□ -0.49
RNF40-212ENST00000602784 NEUROG1Q92886 237 aa12.01□□□□□ -0.49
RNF40-212ENST00000602784 OTULINQ96BN8 352 aa12.01□□□□□ -0.49
RNF40-212ENST00000602784 POM121L2Q96KW2 1035 aa12.01□□□□□ -0.49
RNF40-212ENST00000602784 LIME1Q9H400 295 aa12.01□□□□□ -0.49
RNF40-212ENST00000602784 ZNF442Q9H7R0 627 aa12.01□□□□□ -0.49
RNF40-212ENST00000602784 MED20Q9H944 212 aa12.01□□□□□ -0.49
RNF40-212ENST00000602784 FAIMQ9NVQ4 179 aa12.01□□□□□ -0.49
RNF40-212ENST00000602784 NDRG4Q9ULP0 352 aaKnown RBP12.01□□□□□ -0.49
RNF40-212ENST00000602784 POLR1DQ9Y2S0 133 aa12.01□□□□□ -0.49
RNF40-212ENST00000602784 ATP23Q9Y6H3 246 aa12.01□□□□□ -0.49
RNF40-212ENST00000602784 COMMD3-BMI1R4GMX3 469 aa12.01□□□□□ -0.49
RNF40-212ENST00000602784 RTTNQ86VV8 2226 aa12.01□□□□□ -0.49
RNF40-212ENST00000602784 MAST4O15021 2626 aa12□□□□□ -0.49
RNF40-212ENST00000602784 LOC100509620A0A075B734 347 aa12□□□□□ -0.49
RNF40-212ENST00000602784 OR6C6A6NF89 314 aa12□□□□□ -0.49
RNF40-212ENST00000602784 VSTM5A8MXK1 200 aa12□□□□□ -0.49
RNF40-212ENST00000602784 CASQ2O14958 399 aaPredicted RBP12□□□□□ -0.49
RNF40-212ENST00000602784 TLX2O43763 284 aaPredicted RBP12□□□□□ -0.49
RNF40-212ENST00000602784 ICMTO60725 284 aa12□□□□□ -0.49
RNF40-212ENST00000602784 DANCRP0C864 163 aa12□□□□□ -0.49
RNF40-212ENST00000602784 SLC2A5P22732 501 aa12□□□□□ -0.49
RNF40-212ENST00000602784 GSTT1P30711 240 aa12□□□□□ -0.49
RNF40-212ENST00000602784 APOBEC3AP31941 199 aaPredicted RBP12□□□□□ -0.49
RNF40-212ENST00000602784 ENTPD1P49961 510 aa12□□□□□ -0.49
RNF40-212ENST00000602784 GDI2P50395 445 aaKnown RBP12□□□□□ -0.49
RNF40-212ENST00000602784 CDC42P60953 191 aa12□□□□□ -0.49
RNF40-212ENST00000602784 ADAM8P78325 824 aa12□□□□□ -0.49
RNF40-212ENST00000602784 GALK2Q01415 458 aa12□□□□□ -0.49
RNF40-212ENST00000602784 ECH1Q13011 328 aa12□□□□□ -0.49
RNF40-212ENST00000602784 RAB35Q15286 201 aa12□□□□□ -0.49
RNF40-212ENST00000602784 CCDC92Q53HC0 331 aaPredicted RBP12□□□□□ -0.49
RNF40-212ENST00000602784 SLC18B1Q6NT16 456 aa12□□□□□ -0.49
RNF40-212ENST00000602784 B3GLCTQ6Y288 498 aa12□□□□□ -0.49
RNF40-212ENST00000602784 CDH24Q86UP0 819 aa12□□□□□ -0.49
RNF40-212ENST00000602784 C1orf174Q8IYL3 243 aa12□□□□□ -0.49
RNF40-212ENST00000602784 TCEANCQ8N8B7 351 aa12□□□□□ -0.49
RNF40-212ENST00000602784 ZNF511Q8NB15 262 aa12□□□□□ -0.49
RNF40-212ENST00000602784 OR8J1Q8NGP2 316 aa12□□□□□ -0.49
RNF40-212ENST00000602784 OR6K6Q8NGW6 343 aa12□□□□□ -0.49
RNF40-212ENST00000602784 OR2AJ1Q8NGZ0 328 aa12□□□□□ -0.49
RNF40-212ENST00000602784 IPCEF1Q8WWN9 437 aaPredicted RBP12□□□□□ -0.49
RNF40-212ENST00000602784 NRGNQ92686 78 aa12□□□□□ -0.49
RNF40-212ENST00000602784 PIGTQ969N2 578 aa12□□□□□ -0.49
RNF40-212ENST00000602784 MBD6Q96DN6 1003 aa12□□□□□ -0.49
RNF40-212ENST00000602784 HDHD2Q9H0R4 259 aa12□□□□□ -0.49
RNF40-212ENST00000602784 OR51V1Q9H2C8 321 aa12□□□□□ -0.49
RNF40-212ENST00000602784 TOR3AQ9H497 397 aa12□□□□□ -0.49
RNF40-212ENST00000602784 CDH20Q9HBT6 801 aa12□□□□□ -0.49
RNF40-212ENST00000602784 CA10Q9NS85 328 aa12□□□□□ -0.49
RNF40-212ENST00000602784 PLEK2Q9NYT0 353 aa12□□□□□ -0.49
RNF40-212ENST00000602784 TVP23AA6NH52 213 aa11.99□□□□□ -0.49
RNF40-212ENST00000602784 CYSRT1A8MQ03 144 aa11.99□□□□□ -0.49
RNF40-212ENST00000602784 ZNF593O00488 134 aaPredicted RBP11.99□□□□□ -0.49
RNF40-212ENST00000602784 RER1O15258 196 aa11.99□□□□□ -0.49
RNF40-212ENST00000602784 SYNGR3O43761 229 aa11.99□□□□□ -0.49
RNF40-212ENST00000602784 DOK2O60496 412 aa11.99□□□□□ -0.49
RNF40-212ENST00000602784 ATE1O95260 518 aa11.99□□□□□ -0.49
RNF40-212ENST00000602784 CD53P19397 219 aa11.99□□□□□ -0.49
RNF40-212ENST00000602784 DNASE1P24855 282 aa11.99□□□□□ -0.49
RNF40-212ENST00000602784 TTKP33981 857 aa11.99□□□□□ -0.49
RNF40-212ENST00000602784 GLRXP35754 106 aa11.99□□□□□ -0.49
RNF40-212ENST00000602784 RAD52P43351 418 aa11.99□□□□□ -0.49
RNF40-212ENST00000602784 FABP6P51161 128 aa11.99□□□□□ -0.49
RNF40-212ENST00000602784 RPS23P62266 143 aaKnown RBP11.99□□□□□ -0.49
RNF40-212ENST00000602784 KEAP1Q14145 624 aa11.99□□□□□ -0.49
RNF40-212ENST00000602784 ZIK1Q3SY52 487 aaPredicted RBP11.99□□□□□ -0.49
RNF40-212ENST00000602784 ELFN2Q5R3F8 820 aa11.99□□□□□ -0.49
RNF40-212ENST00000602784 AADACL4Q5VUY2 407 aa11.99□□□□□ -0.49
RNF40-212ENST00000602784 NXNL2Q5VZ03 156 aa11.99□□□□□ -0.49
RNF40-212ENST00000602784 OTPQ5XKR4 325 aa11.99□□□□□ -0.49
RNF40-212ENST00000602784 ARL9Q6T311 187 aa11.99□□□□□ -0.49
RNF40-212ENST00000602784 UNQ6126/PRO20091Q6UXV3 157 aa11.99□□□□□ -0.49
RNF40-212ENST00000602784 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.99□□□□□ -0.49
RNF40-212ENST00000602784 DTX2Q86UW9 622 aa11.99□□□□□ -0.49
RNF40-212ENST00000602784 TIGD4Q8IY51 512 aa11.99□□□□□ -0.49
RNF40-212ENST00000602784 OR1F12Q8NHA8 337 aa11.99□□□□□ -0.49
RNF40-212ENST00000602784 INTS14Q96SY0 518 aa11.99□□□□□ -0.49
RNF40-212ENST00000602784 MBOAT4Q96T53 435 aa11.99□□□□□ -0.49
RNF40-212ENST00000602784 TEAD3Q99594 435 aa11.99□□□□□ -0.49
RNF40-212ENST00000602784 PITX2Q99697 317 aa11.99□□□□□ -0.49
RNF40-212ENST00000602784 COQ7Q99807 217 aa11.99□□□□□ -0.49
RNF40-212ENST00000602784 WDR76Q9H967 626 aa11.99□□□□□ -0.49
RNF40-212ENST00000602784 SMPD3Q9NY59 655 aaPredicted RBP11.99□□□□□ -0.49
RNF40-212ENST00000602784 H2AFY2Q9P0M6 372 aaPredicted RBP11.99□□□□□ -0.49
RNF40-212ENST00000602784 EIF3KQ9UBQ5 218 aaKnown RBP11.99□□□□□ -0.49
RNF40-212ENST00000602784 GDF2Q9UK05 429 aaPredicted RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms