RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 LINGO2Q7L985 606 aa15.86■□□□□ 0.13
VRK3-225ENST00000601912 ABHD12BQ7Z5M8 362 aaPredicted RBP15.86■□□□□ 0.13
VRK3-225ENST00000601912 FGD2Q7Z6J4 655 aa15.86■□□□□ 0.13
VRK3-225ENST00000601912 UBE2J2Q8N2K1 259 aa15.86■□□□□ 0.13
VRK3-225ENST00000601912 KDF1Q8NAX2 398 aaPredicted RBP15.86■□□□□ 0.13
VRK3-225ENST00000601912 HTRA1Q92743 480 aa15.86■□□□□ 0.13
VRK3-225ENST00000601912 GHSRQ92847 366 aa15.86■□□□□ 0.13
VRK3-225ENST00000601912 SLAMF6Q96DU3 332 aa15.86■□□□□ 0.13
VRK3-225ENST00000601912 MAP6Q96JE9 813 aa15.86■□□□□ 0.13
VRK3-225ENST00000601912 PRORYQ9H606 182 aa15.86■□□□□ 0.13
VRK3-225ENST00000601912 GSTK1Q9Y2Q3 226 aa15.86■□□□□ 0.13
VRK3-225ENST00000601912 EMC9Q9Y3B6 208 aa15.86■□□□□ 0.13
VRK3-225ENST00000601912 LRP12Q9Y561 859 aa15.86■□□□□ 0.13
VRK3-225ENST00000601912 FIGNL2A6NMB9 653 aa15.85■□□□□ 0.13
VRK3-225ENST00000601912 RPL36A-HNRNPH2H7BZ11 118 aa15.85■□□□□ 0.13
VRK3-225ENST00000601912 TPOP07202 933 aa15.85■□□□□ 0.13
VRK3-225ENST00000601912 PCSK6P29122 969 aa15.85■□□□□ 0.13
VRK3-225ENST00000601912 ALKBH1Q13686 389 aaKnown RBP15.85■□□□□ 0.13
VRK3-225ENST00000601912 SOWAHCQ53LP3 525 aaPredicted RBP15.85■□□□□ 0.13
VRK3-225ENST00000601912 OR7E24Q6IFN5 339 aa15.85■□□□□ 0.13
VRK3-225ENST00000601912 LRRC18Q8N456 261 aa15.85■□□□□ 0.13
VRK3-225ENST00000601912 GJC3Q8NFK1 279 aa15.85■□□□□ 0.13
VRK3-225ENST00000601912 NDNFQ8TB73 568 aa15.85■□□□□ 0.13
VRK3-225ENST00000601912 KCNN2Q9H2S1 579 aa15.85■□□□□ 0.13
VRK3-225ENST00000601912 C12orf49Q9H741 205 aa15.85■□□□□ 0.13
VRK3-225ENST00000601912 SVILO95425 2214 aa15.84■□□□□ 0.13
VRK3-225ENST00000601912 LRRTM2O43300 516 aa15.84■□□□□ 0.13
VRK3-225ENST00000601912 GPRIN2O60269 458 aa15.84■□□□□ 0.13
VRK3-225ENST00000601912 RGS9O75916 674 aaPredicted RBP15.84■□□□□ 0.13
VRK3-225ENST00000601912 FARS2O95363 451 aaKnown RBP15.84■□□□□ 0.13
VRK3-225ENST00000601912 SERPINA3P01011 423 aa15.84■□□□□ 0.13
VRK3-225ENST00000601912 ABOP16442 354 aa15.84■□□□□ 0.13
VRK3-225ENST00000601912 ZNF182P17025 639 aaPredicted RBP15.84■□□□□ 0.13
VRK3-225ENST00000601912 UGT2B10P36537 528 aa15.84■□□□□ 0.13
VRK3-225ENST00000601912 TUBA1BP68363 451 aa15.84■□□□□ 0.13
VRK3-225ENST00000601912 FABP5Q01469 135 aa15.84■□□□□ 0.13
VRK3-225ENST00000601912 TAF13Q15543 124 aa15.84■□□□□ 0.13
VRK3-225ENST00000601912 NRN1LQ496H8 165 aa15.84■□□□□ 0.13
VRK3-225ENST00000601912 CFAP77Q6ZQR2 320 aa15.84■□□□□ 0.13
VRK3-225ENST00000601912 TUBA1AQ71U36 451 aa15.84■□□□□ 0.13
VRK3-225ENST00000601912 FAM214BQ7L5A3 538 aa15.84■□□□□ 0.13
VRK3-225ENST00000601912 PGLYRP3Q96LB9 341 aa15.84■□□□□ 0.13
VRK3-225ENST00000601912 HDHD5Q9BXW7 423 aa15.84■□□□□ 0.13
VRK3-225ENST00000601912 DCSTAMPQ9H295 470 aa15.84■□□□□ 0.13
VRK3-225ENST00000601912 TXNL4BQ9NX01 149 aaKnown RBP15.84■□□□□ 0.13
VRK3-225ENST00000601912 ZNF878C9JN71 531 aa15.83■□□□□ 0.13
VRK3-225ENST00000601912 CST2P09228 141 aa15.83■□□□□ 0.13
VRK3-225ENST00000601912 SFTPCP11686 197 aa15.83■□□□□ 0.13
VRK3-225ENST00000601912 B4GALT1P15291 398 aa15.83■□□□□ 0.13
VRK3-225ENST00000601912 FGF9P31371 208 aaPredicted RBP15.83■□□□□ 0.13
VRK3-225ENST00000601912 OPRL1P41146 370 aa15.83■□□□□ 0.13
VRK3-225ENST00000601912 OR3A2P47893 321 aa15.83■□□□□ 0.13
VRK3-225ENST00000601912 KLRB1Q12918 225 aa15.83■□□□□ 0.13
VRK3-225ENST00000601912 ENDOGQ14249 297 aaKnown RBP15.83■□□□□ 0.13
VRK3-225ENST00000601912 FDX2Q6P4F2 183 aa15.83■□□□□ 0.13
VRK3-225ENST00000601912 KLHL24Q6TFL4 600 aa15.83■□□□□ 0.13
VRK3-225ENST00000601912 SLC22A24Q8N4F4 322 aa15.83■□□□□ 0.13
VRK3-225ENST00000601912 OR2G2Q8NGZ5 317 aa15.83■□□□□ 0.13
VRK3-225ENST00000601912 FAM57AQ8TBR7 257 aa15.83■□□□□ 0.13
VRK3-225ENST00000601912 SNRNP40Q96DI7 357 aaKnown RBP15.83■□□□□ 0.13
VRK3-225ENST00000601912 KCTD7Q96MP8 289 aa15.83■□□□□ 0.13
VRK3-225ENST00000601912 SLC25A18Q9H1K4 315 aa15.83■□□□□ 0.13
VRK3-225ENST00000601912 PRRC2CQ9Y520 2896 aaKnown RBP15.83■□□□□ 0.13
VRK3-225ENST00000601912 CHD8Q9HCK8 2581 aa15.83■□□□□ 0.12
VRK3-225ENST00000601912 GABRPO00591 440 aa15.83■□□□□ 0.12
VRK3-225ENST00000601912 RER1O15258 196 aa15.83■□□□□ 0.12
VRK3-225ENST00000601912 WNT11O96014 354 aa15.83■□□□□ 0.12
VRK3-225ENST00000601912 HOXD4P09016 255 aaPredicted RBP15.83■□□□□ 0.12
VRK3-225ENST00000601912 DCTDP32321 178 aa15.83■□□□□ 0.12
VRK3-225ENST00000601912 TGFBR1P36897 503 aa15.83■□□□□ 0.12
VRK3-225ENST00000601912 SERPINB10P48595 397 aa15.83■□□□□ 0.12
VRK3-225ENST00000601912 TDGF1P3P51864 188 aa15.83■□□□□ 0.12
VRK3-225ENST00000601912 SH3BGRP55822 239 aaPredicted RBP15.83■□□□□ 0.12
VRK3-225ENST00000601912 NANOS3P60323 173 aaKnown RBP15.83■□□□□ 0.12
VRK3-225ENST00000601912 GTF3C1Q12789 2109 aa15.83■□□□□ 0.12
VRK3-225ENST00000601912 FAPQ12884 760 aa15.83■□□□□ 0.12
VRK3-225ENST00000601912 ZNF829Q3KNS6 432 aaPredicted RBP15.83■□□□□ 0.12
VRK3-225ENST00000601912 FBXW9Q5XUX1 488 aa15.83■□□□□ 0.12
VRK3-225ENST00000601912 C22orf42Q6IC83 251 aa15.83■□□□□ 0.12
VRK3-225ENST00000601912 ZNF813Q6ZN06 617 aa15.83■□□□□ 0.12
VRK3-225ENST00000601912 CD163Q86VB7 1156 aa15.83■□□□□ 0.12
VRK3-225ENST00000601912 GCNT2Q8N0V5 402 aa15.83■□□□□ 0.12
VRK3-225ENST00000601912 C9orf106Q8NAJ2 232 aa15.83■□□□□ 0.12
VRK3-225ENST00000601912 OR5AK2Q8NH90 309 aa15.83■□□□□ 0.12
VRK3-225ENST00000601912 ABHD4Q8TB40 342 aa15.83■□□□□ 0.12
VRK3-225ENST00000601912 RPS4Y2Q8TD47 263 aa15.83■□□□□ 0.12
VRK3-225ENST00000601912 HSD17B8Q92506 261 aa15.83■□□□□ 0.12
VRK3-225ENST00000601912 RNF166Q96A37 237 aaPredicted RBP15.83■□□□□ 0.12
VRK3-225ENST00000601912 TRMT61AQ96FX7 289 aaKnown RBP15.83■□□□□ 0.12
VRK3-225ENST00000601912 TSC22D3Q99576 134 aa15.83■□□□□ 0.12
VRK3-225ENST00000601912 SLX1AQ9BQ83 275 aa15.83■□□□□ 0.12
VRK3-225ENST00000601912 COMMD4Q9H0A8 199 aa15.83■□□□□ 0.12
VRK3-225ENST00000601912 RNF167Q9H6Y7 350 aa15.83■□□□□ 0.12
VRK3-225ENST00000601912 NIPAL2Q9H841 368 aa15.83■□□□□ 0.12
VRK3-225ENST00000601912 FRRS1LQ9P0K9 344 aa15.83■□□□□ 0.12
VRK3-225ENST00000601912 ZNF281Q9Y2X9 895 aa15.83■□□□□ 0.12
VRK3-225ENST00000601912 MAP1BP46821 2468 aaKnown RBP15.82■□□□□ 0.12
VRK3-225ENST00000601912 TMEM212A6NML5 194 aa15.82■□□□□ 0.12
VRK3-225ENST00000601912 HSD11B1P28845 292 aa15.82■□□□□ 0.12
VRK3-225ENST00000601912 CCR9P51686 369 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms