RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 MAGEA5P43359 124 aa10.43□□□□□ -0.74
VRK3-223ENST00000601341 BLVRAP53004 296 aa10.43□□□□□ -0.74
VRK3-223ENST00000601341 AP3S2P59780 193 aa10.43□□□□□ -0.74
VRK3-223ENST00000601341 CTXN1P60606 82 aa10.43□□□□□ -0.74
VRK3-223ENST00000601341 EGR3Q06889 387 aa10.43□□□□□ -0.74
VRK3-223ENST00000601341 CD276Q5ZPR3 534 aa10.43□□□□□ -0.74
VRK3-223ENST00000601341 CREB3L2Q70SY1 520 aa10.43□□□□□ -0.74
VRK3-223ENST00000601341 FAM220AQ7Z4H9 259 aa10.43□□□□□ -0.74
VRK3-223ENST00000601341 UBE2J2Q8N2K1 259 aa10.43□□□□□ -0.74
VRK3-223ENST00000601341 OR2T4Q8NH00 348 aa10.43□□□□□ -0.74
VRK3-223ENST00000601341 KLHL15Q96M94 604 aa10.43□□□□□ -0.74
VRK3-223ENST00000601341 DMRTB1Q96MA1 342 aa10.43□□□□□ -0.74
VRK3-223ENST00000601341 GHITMQ9H3K2 345 aa10.43□□□□□ -0.74
VRK3-223ENST00000601341 MARCH7Q9H992 704 aa10.43□□□□□ -0.74
VRK3-223ENST00000601341 EMC7Q9NPA0 242 aa10.43□□□□□ -0.74
VRK3-223ENST00000601341 BRD7Q9NPI1 651 aa10.43□□□□□ -0.74
VRK3-223ENST00000601341 ETV7Q9Y603 341 aa10.43□□□□□ -0.74
VRK3-223ENST00000601341 A0A1W2PNR3 127 aa10.42□□□□□ -0.74
VRK3-223ENST00000601341 IFITM5A6NNB3 132 aa10.42□□□□□ -0.74
VRK3-223ENST00000601341 EEF1E1O43324 174 aaKnown RBP10.42□□□□□ -0.74
VRK3-223ENST00000601341 LANCL1O43813 399 aa10.42□□□□□ -0.74
VRK3-223ENST00000601341 PMS2P2O95744 297 aa10.42□□□□□ -0.74
VRK3-223ENST00000601341 F13BP05160 661 aa10.42□□□□□ -0.74
VRK3-223ENST00000601341 NAA10P41227 235 aaPredicted RBP10.42□□□□□ -0.74
VRK3-223ENST00000601341 AGFG1P52594 562 aaKnown RBP10.42□□□□□ -0.74
VRK3-223ENST00000601341 GFRA1P56159 465 aa10.42□□□□□ -0.74
VRK3-223ENST00000601341 ERVK-25P63136 954 aa10.42□□□□□ -0.74
VRK3-223ENST00000601341 CSNK2A1P68400 391 aaPredicted RBP10.42□□□□□ -0.74
VRK3-223ENST00000601341 SLC35A1P78382 337 aa10.42□□□□□ -0.74
VRK3-223ENST00000601341 ZP4Q12836 540 aa10.42□□□□□ -0.74
VRK3-223ENST00000601341 SLC7A5P1Q8MH63 180 aa10.42□□□□□ -0.74
VRK3-223ENST00000601341 FAM109AQ8N4B1 249 aa10.42□□□□□ -0.74
VRK3-223ENST00000601341 RFLNBQ8N5W9 214 aa10.42□□□□□ -0.74
VRK3-223ENST00000601341 NSMAFQ92636 917 aa10.42□□□□□ -0.74
VRK3-223ENST00000601341 SLITRK2Q9H156 845 aa10.42□□□□□ -0.74
VRK3-223ENST00000601341 RANBP3Q9H6Z4 567 aaPredicted RBP10.42□□□□□ -0.74
VRK3-223ENST00000601341 TMEM165Q9HC07 324 aa10.42□□□□□ -0.74
VRK3-223ENST00000601341 ACKR4Q9NPB9 350 aa10.42□□□□□ -0.74
VRK3-223ENST00000601341 CHST11Q9NPF2 352 aa10.42□□□□□ -0.74
VRK3-223ENST00000601341 MCUBQ9NWR8 336 aa10.42□□□□□ -0.74
VRK3-223ENST00000601341 COPS3Q9UNS2 423 aa10.42□□□□□ -0.74
VRK3-223ENST00000601341 LOC400499M0QZD8 3231 aa10.42□□□□□ -0.74
VRK3-223ENST00000601341 A8MV72 311 aaPredicted RBP10.42□□□□□ -0.74
VRK3-223ENST00000601341 C11orf98E9PRG8 122 aa10.42□□□□□ -0.74
VRK3-223ENST00000601341 SELENOFO60613 162 aa10.42□□□□□ -0.74
VRK3-223ENST00000601341 EIF1BO60739 113 aaKnown RBP10.42□□□□□ -0.74
VRK3-223ENST00000601341 PRAF2O60831 178 aa10.42□□□□□ -0.74
VRK3-223ENST00000601341 SNAPC5O75971 98 aa10.42□□□□□ -0.74
VRK3-223ENST00000601341 AKR7A3O95154 331 aa10.42□□□□□ -0.74
VRK3-223ENST00000601341 TCRBP04435 133 aa10.42□□□□□ -0.74
VRK3-223ENST00000601341 POU3F2P20265 443 aaPredicted RBP10.42□□□□□ -0.74
VRK3-223ENST00000601341 STOMP27105 288 aa10.42□□□□□ -0.74
VRK3-223ENST00000601341 RCVRNP35243 200 aa10.42□□□□□ -0.74
VRK3-223ENST00000601341 CDKN2AP42771 156 aaKnown RBP10.42□□□□□ -0.74
VRK3-223ENST00000601341 PUDPQ08623 228 aa10.42□□□□□ -0.74
VRK3-223ENST00000601341 C19orf57Q0VDD7 668 aa10.42□□□□□ -0.74
VRK3-223ENST00000601341 SLC10A1Q14973 349 aa10.42□□□□□ -0.74
VRK3-223ENST00000601341 Q499Y3 187 aa10.42□□□□□ -0.74
VRK3-223ENST00000601341 FDX2Q6P4F2 183 aa10.42□□□□□ -0.74
VRK3-223ENST00000601341 LEG1Q6P5S2 330 aa10.42□□□□□ -0.74
VRK3-223ENST00000601341 LRRN1Q6UXK5 716 aa10.42□□□□□ -0.74
VRK3-223ENST00000601341 ZNF782Q6ZMW2 699 aaPredicted RBP10.42□□□□□ -0.74
VRK3-223ENST00000601341 ZNF767PQ75MW2 155 aa10.42□□□□□ -0.74
VRK3-223ENST00000601341 BTN2A1Q7KYR7 527 aa10.42□□□□□ -0.74
VRK3-223ENST00000601341 FGD2Q7Z6J4 655 aa10.42□□□□□ -0.74
VRK3-223ENST00000601341 CDC20BQ86Y33 519 aa10.42□□□□□ -0.74
VRK3-223ENST00000601341 TIGD4Q8IY51 512 aa10.42□□□□□ -0.74
VRK3-223ENST00000601341 ADPRHL1Q8NDY3 354 aa10.42□□□□□ -0.74
VRK3-223ENST00000601341 OR6K6Q8NGW6 343 aa10.42□□□□□ -0.74
VRK3-223ENST00000601341 OR56B4Q8NH76 319 aa10.42□□□□□ -0.74
VRK3-223ENST00000601341 DERL3Q96Q80 235 aa10.42□□□□□ -0.74
VRK3-223ENST00000601341 OR14A2Q96R54 314 aa10.42□□□□□ -0.74
VRK3-223ENST00000601341 MED28Q9H204 178 aa10.42□□□□□ -0.74
VRK3-223ENST00000601341 GRHPRQ9UBQ7 328 aa10.42□□□□□ -0.74
VRK3-223ENST00000601341 FRYQ5TBA9 3013 aa10.41□□□□□ -0.74
VRK3-223ENST00000601341 TEX13CA0A0J9YWL9 993 aa10.41□□□□□ -0.74
VRK3-223ENST00000601341 TRBV5-5A0A0J9YX44 114 aa10.41□□□□□ -0.74
VRK3-223ENST00000601341 A0A1B0GVI7 797 aa10.41□□□□□ -0.74
VRK3-223ENST00000601341 TMEM212A6NML5 194 aa10.41□□□□□ -0.74
VRK3-223ENST00000601341 MS4A18H0YCH9 400 aa10.41□□□□□ -0.74
VRK3-223ENST00000601341 GABARAPH6UMI1 98 aa10.41□□□□□ -0.74
VRK3-223ENST00000601341 DNPH1O43598 174 aa10.41□□□□□ -0.74
VRK3-223ENST00000601341 ZFPL1O95159 310 aa10.41□□□□□ -0.74
VRK3-223ENST00000601341 RENP00797 406 aa10.41□□□□□ -0.74
VRK3-223ENST00000601341 CELA3AP09093 270 aa10.41□□□□□ -0.74
VRK3-223ENST00000601341 ALKBH1Q13686 389 aaKnown RBP10.41□□□□□ -0.74
VRK3-223ENST00000601341 KLF9Q13886 244 aaPredicted RBP10.41□□□□□ -0.74
VRK3-223ENST00000601341 ZNF169Q14929 603 aaPredicted RBP10.41□□□□□ -0.74
VRK3-223ENST00000601341 TBR1Q16650 682 aa10.41□□□□□ -0.74
VRK3-223ENST00000601341 MS4A18Q3C1V0 323 aa10.41□□□□□ -0.74
VRK3-223ENST00000601341 ELFN2Q5R3F8 820 aa10.41□□□□□ -0.74
VRK3-223ENST00000601341 ESPNLQ6ZVH7 1005 aa10.41□□□□□ -0.74
VRK3-223ENST00000601341 ASB18Q6ZVZ8 466 aa10.41□□□□□ -0.74
VRK3-223ENST00000601341 KRT74Q7RTS7 529 aa10.41□□□□□ -0.74
VRK3-223ENST00000601341 OR13C5Q8NGS8 318 aa10.41□□□□□ -0.74
VRK3-223ENST00000601341 OR5H6Q8NGV6 325 aa10.41□□□□□ -0.74
VRK3-223ENST00000601341 ZNF671Q8TAW3 534 aa10.41□□□□□ -0.74
VRK3-223ENST00000601341 RNF166Q96A37 237 aaPredicted RBP10.41□□□□□ -0.74
VRK3-223ENST00000601341 RASD2Q96D21 266 aa10.41□□□□□ -0.74
VRK3-223ENST00000601341 Q96M85 177 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms