RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, human

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSBP4-208	ENST00000600628	VASH1	Q7L8A9	365 aa	Predicted RBP	7.53	□□□□□ -1.2
SSBP4-208	ENST00000600628	SVOPL	Q8N434	492 aa		7.53	□□□□□ -1.2
SSBP4-208	ENST00000600628	ZNF525	Q8N782	197 aa		7.53	□□□□□ -1.2
SSBP4-208	ENST00000600628	AQP11	Q8NBQ7	271 aa		7.53	□□□□□ -1.2
SSBP4-208	ENST00000600628	OR1J2	Q8NGS2	313 aa		7.53	□□□□□ -1.2
SSBP4-208	ENST00000600628	AKR7L	Q8NHP1	331 aa		7.53	□□□□□ -1.2
SSBP4-208	ENST00000600628	ZNRF4	Q8WWF5	429 aa		7.53	□□□□□ -1.2
SSBP4-208	ENST00000600628	NRBF2	Q96F24	287 aa		7.53	□□□□□ -1.2
SSBP4-208	ENST00000600628	NIPSNAP1	Q9BPW8	284 aa		7.53	□□□□□ -1.2
SSBP4-208	ENST00000600628	RHNO1	Q9BSD3	238 aa		7.53	□□□□□ -1.2
SSBP4-208	ENST00000600628	REEP1	Q9H902	201 aa		7.53	□□□□□ -1.2
SSBP4-208	ENST00000600628	EMC7	Q9NPA0	242 aa		7.53	□□□□□ -1.2
SSBP4-208	ENST00000600628	TBCCD1	Q9NVR7	557 aa		7.53	□□□□□ -1.2
SSBP4-208	ENST00000600628	ARMC1	Q9NVT9	282 aa		7.53	□□□□□ -1.2
SSBP4-208	ENST00000600628	MRPL22	Q9NWU5	206 aa	Known RBP	7.53	□□□□□ -1.2
SSBP4-208	ENST00000600628	DNAJB9	Q9UBS3	223 aa		7.53	□□□□□ -1.2
SSBP4-208	ENST00000600628	CYB5R1	Q9UHQ9	305 aa		7.53	□□□□□ -1.2
SSBP4-208	ENST00000600628	BAIAP2	Q9UQB8	552 aa		7.53	□□□□□ -1.2
SSBP4-208	ENST00000600628	SPEF1	Q9Y4P9	236 aa		7.53	□□□□□ -1.2
SSBP4-208	ENST00000600628		U3KQV3	271 aa		7.53	□□□□□ -1.2
SSBP4-208	ENST00000600628	ATR	Q13535	2644 aa		7.53	□□□□□ -1.2
SSBP4-208	ENST00000600628	FBN1	P35555	2871 aa	Known RBP	7.53	□□□□□ -1.2
SSBP4-208	ENST00000600628	IQCM	A0A1B0GVH7	501 aa		7.52	□□□□□ -1.21
SSBP4-208	ENST00000600628	C12orf71	A8MTZ7	269 aa		7.52	□□□□□ -1.21
SSBP4-208	ENST00000600628		J3QW42	95 aa		7.52	□□□□□ -1.21
SSBP4-208	ENST00000600628	NDUFS8	O00217	210 aa		7.52	□□□□□ -1.21
SSBP4-208	ENST00000600628	FKBP6	O75344	327 aa		7.52	□□□□□ -1.21
SSBP4-208	ENST00000600628	LY6H	O94772	140 aa		7.52	□□□□□ -1.21
SSBP4-208	ENST00000600628	CST1	P01037	141 aa		7.52	□□□□□ -1.21
SSBP4-208	ENST00000600628	NGF	P01138	241 aa		7.52	□□□□□ -1.21
SSBP4-208	ENST00000600628	CSF3	P09919	207 aa		7.52	□□□□□ -1.21
SSBP4-208	ENST00000600628	PSKH1	P11801	424 aa		7.52	□□□□□ -1.21
SSBP4-208	ENST00000600628	TUBG1	P23258	451 aa		7.52	□□□□□ -1.21
SSBP4-208	ENST00000600628	OTX1	P32242	354 aa	Predicted RBP	7.52	□□□□□ -1.21
SSBP4-208	ENST00000600628	RAD52	P43351	418 aa		7.52	□□□□□ -1.21
SSBP4-208	ENST00000600628	RASSF2	P50749	326 aa		7.52	□□□□□ -1.21
SSBP4-208	ENST00000600628	MMP15	P51511	669 aa		7.52	□□□□□ -1.21
SSBP4-208	ENST00000600628	SLC25A1	P53007	311 aa		7.52	□□□□□ -1.21
SSBP4-208	ENST00000600628	ERVS71-1	P61550	626 aa		7.52	□□□□□ -1.21
SSBP4-208	ENST00000600628	MRPS11	P82912	194 aa	Known RBP	7.52	□□□□□ -1.21
SSBP4-208	ENST00000600628	PLP2	Q04941	152 aa		7.52	□□□□□ -1.21
SSBP4-208	ENST00000600628	LOXL1	Q08397	574 aa	Predicted RBP	7.52	□□□□□ -1.21
SSBP4-208	ENST00000600628	SCRN3	Q0VDG4	424 aa		7.52	□□□□□ -1.21
SSBP4-208	ENST00000600628	RIN1	Q13671	783 aa		7.52	□□□□□ -1.21
SSBP4-208	ENST00000600628	TBC1D28	Q2M2D7	210 aa		7.52	□□□□□ -1.21
SSBP4-208	ENST00000600628	LINC01590	Q5TEZ4	76 aa		7.52	□□□□□ -1.21
SSBP4-208	ENST00000600628	ZNF774	Q6NX45	483 aa		7.52	□□□□□ -1.21
SSBP4-208	ENST00000600628	FAHD1	Q6P587	224 aa		7.52	□□□□□ -1.21
SSBP4-208	ENST00000600628	LEG1	Q6P5S2	330 aa		7.52	□□□□□ -1.21
SSBP4-208	ENST00000600628	CLEC2A	Q6UVW9	174 aa		7.52	□□□□□ -1.21
SSBP4-208	ENST00000600628	RFPL4B	Q6ZWI9	263 aa		7.52	□□□□□ -1.21
SSBP4-208	ENST00000600628	ZCCHC24	Q8N2G6	241 aa	Known RBP	7.52	□□□□□ -1.21
SSBP4-208	ENST00000600628	MAPK1IP1L	Q8NDC0	245 aa		7.52	□□□□□ -1.21
SSBP4-208	ENST00000600628	OR10G2	Q8NGC3	310 aa		7.52	□□□□□ -1.21
SSBP4-208	ENST00000600628	OR4Q3	Q8NH05	313 aa		7.52	□□□□□ -1.21
SSBP4-208	ENST00000600628	OR4K13	Q8NH42	304 aa		7.52	□□□□□ -1.21
SSBP4-208	ENST00000600628	GIPC3	Q8TF64	312 aa		7.52	□□□□□ -1.21
SSBP4-208	ENST00000600628	C11orf40	Q8WZ69	217 aa		7.52	□□□□□ -1.21
SSBP4-208	ENST00000600628	LRGUK	Q96M69	825 aa		7.52	□□□□□ -1.21
SSBP4-208	ENST00000600628	IFT27	Q9BW83	186 aa		7.52	□□□□□ -1.21
SSBP4-208	ENST00000600628	KCNN2	Q9H2S1	579 aa		7.52	□□□□□ -1.21
SSBP4-208	ENST00000600628	MARCH7	Q9H992	704 aa		7.52	□□□□□ -1.21
SSBP4-208	ENST00000600628	MYOZ1	Q9NP98	299 aa	Predicted RBP	7.52	□□□□□ -1.21
SSBP4-208	ENST00000600628	PNRC2	Q9NPJ4	139 aa	Known RBP	7.52	□□□□□ -1.21
SSBP4-208	ENST00000600628	TUBG2	Q9NRH3	451 aa		7.52	□□□□□ -1.21
SSBP4-208	ENST00000600628	CMC2	Q9NRP2	79 aa		7.52	□□□□□ -1.21
SSBP4-208	ENST00000600628	NKIRAS2	Q9NYR9	191 aa		7.52	□□□□□ -1.21
SSBP4-208	ENST00000600628		A0A1W2PPL8	197 aa		7.51	□□□□□ -1.21
SSBP4-208	ENST00000600628	LOC390937	A0A1W2PQ73	354 aa		7.51	□□□□□ -1.21
SSBP4-208	ENST00000600628	RER1	O15258	196 aa		7.51	□□□□□ -1.21
SSBP4-208	ENST00000600628	SGCE	O43556	437 aa		7.51	□□□□□ -1.21
SSBP4-208	ENST00000600628	RP2	O75695	350 aa		7.51	□□□□□ -1.21
SSBP4-208	ENST00000600628	NCR1	O76036	304 aa		7.51	□□□□□ -1.21
SSBP4-208	ENST00000600628	GPANK1	O95872	356 aa		7.51	□□□□□ -1.21
SSBP4-208	ENST00000600628	CLPTM1	O96005	669 aa		7.51	□□□□□ -1.21
SSBP4-208	ENST00000600628	TACSTD2	P09758	323 aa		7.51	□□□□□ -1.21
SSBP4-208	ENST00000600628	SLC25A16	P16260	332 aa		7.51	□□□□□ -1.21
SSBP4-208	ENST00000600628	APLNR	P35414	380 aa		7.51	□□□□□ -1.21
SSBP4-208	ENST00000600628	GUCA1A	P43080	201 aa	Predicted RBP	7.51	□□□□□ -1.21
SSBP4-208	ENST00000600628	EFNB1	P98172	346 aa		7.51	□□□□□ -1.21
SSBP4-208	ENST00000600628	CDK5	Q00535	292 aa		7.51	□□□□□ -1.21
SSBP4-208	ENST00000600628	GALK2	Q01415	458 aa		7.51	□□□□□ -1.21
SSBP4-208	ENST00000600628	GLO1	Q04760	184 aa		7.51	□□□□□ -1.21
SSBP4-208	ENST00000600628	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	7.51	□□□□□ -1.21
SSBP4-208	ENST00000600628	CCNI	Q14094	377 aa		7.51	□□□□□ -1.21
SSBP4-208	ENST00000600628	MEP1B	Q16820	701 aa		7.51	□□□□□ -1.21
SSBP4-208	ENST00000600628	TEX30	Q5JUR7	227 aa		7.51	□□□□□ -1.21
SSBP4-208	ENST00000600628	ELFN2	Q5R3F8	820 aa		7.51	□□□□□ -1.21
SSBP4-208	ENST00000600628	RGS7BP	Q6MZT1	257 aa	Predicted RBP	7.51	□□□□□ -1.21
SSBP4-208	ENST00000600628	SLC18B1	Q6NT16	456 aa		7.51	□□□□□ -1.21
SSBP4-208	ENST00000600628	SHQ1	Q6PI26	577 aa	Known RBP	7.51	□□□□□ -1.21
SSBP4-208	ENST00000600628	ALDH16A1	Q8IZ83	802 aa		7.51	□□□□□ -1.21
SSBP4-208	ENST00000600628	HS3ST5	Q8IZT8	346 aa		7.51	□□□□□ -1.21
SSBP4-208	ENST00000600628	ZNF786	Q8N393	782 aa		7.51	□□□□□ -1.21
SSBP4-208	ENST00000600628	SLC37A3	Q8NCC5	494 aa		7.51	□□□□□ -1.21
SSBP4-208	ENST00000600628	SDR9C7	Q8NEX9	313 aa		7.51	□□□□□ -1.21
SSBP4-208	ENST00000600628	GJC3	Q8NFK1	279 aa		7.51	□□□□□ -1.21
SSBP4-208	ENST00000600628	OR2T33	Q8NG76	320 aa		7.51	□□□□□ -1.21
SSBP4-208	ENST00000600628	OR10S1	Q8NGN2	331 aa		7.51	□□□□□ -1.21
SSBP4-208	ENST00000600628	NEU4	Q8WWR8	484 aa	Predicted RBP	7.51	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms