RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 SPATA46Q5T0L3 261 aa11.78□□□□□ -0.52
SCAF1-203ENST00000598359 OTPQ5XKR4 325 aa11.78□□□□□ -0.52
SCAF1-203ENST00000598359 TMEM154Q6P9G4 183 aa11.78□□□□□ -0.52
SCAF1-203ENST00000598359 DPPA2Q7Z7J5 298 aa11.78□□□□□ -0.52
SCAF1-203ENST00000598359 CYP4Z1Q86W10 505 aa11.78□□□□□ -0.52
SCAF1-203ENST00000598359 PHC2Q8IXK0 858 aa11.78□□□□□ -0.52
SCAF1-203ENST00000598359 TFAP2CQ92754 450 aa11.78□□□□□ -0.52
SCAF1-203ENST00000598359 Q96M85 177 aa11.78□□□□□ -0.52
SCAF1-203ENST00000598359 RDH12Q96NR8 316 aa11.78□□□□□ -0.52
SCAF1-203ENST00000598359 RBP7Q96R05 134 aa11.78□□□□□ -0.52
SCAF1-203ENST00000598359 ALG12Q9BV10 488 aa11.78□□□□□ -0.52
SCAF1-203ENST00000598359 BEX2Q9BXY8 128 aa11.78□□□□□ -0.52
SCAF1-203ENST00000598359 KCNN2Q9H2S1 579 aa11.78□□□□□ -0.52
SCAF1-203ENST00000598359 NARFLQ9H6Q4 476 aa11.78□□□□□ -0.52
SCAF1-203ENST00000598359 ZNF696Q9H7X3 374 aa11.78□□□□□ -0.52
SCAF1-203ENST00000598359 SMURF2Q9HAU4 748 aa11.78□□□□□ -0.52
SCAF1-203ENST00000598359 UBAP1Q9NZ09 502 aa11.78□□□□□ -0.52
SCAF1-203ENST00000598359 USE1Q9NZ43 259 aa11.78□□□□□ -0.52
SCAF1-203ENST00000598359 NDUFAF4Q9P032 175 aa11.78□□□□□ -0.52
SCAF1-203ENST00000598359 IL20RAQ9UHF4 553 aa11.78□□□□□ -0.52
SCAF1-203ENST00000598359 RPS6KA6Q9UK32 745 aa11.78□□□□□ -0.52
SCAF1-203ENST00000598359 TRBV4-1A0A0J9YWV2 114 aa11.77□□□□□ -0.53
SCAF1-203ENST00000598359 C5orf49A4QMS7 147 aa11.77□□□□□ -0.53
SCAF1-203ENST00000598359 IMPA2O14732 288 aa11.77□□□□□ -0.53
SCAF1-203ENST00000598359 SNAP29O95721 258 aa11.77□□□□□ -0.53
SCAF1-203ENST00000598359 TGFAP01135 160 aa11.77□□□□□ -0.53
SCAF1-203ENST00000598359 STOMP27105 288 aa11.77□□□□□ -0.53
SCAF1-203ENST00000598359 WNT5AP41221 380 aa11.77□□□□□ -0.53
SCAF1-203ENST00000598359 KLF3P57682 345 aaPredicted RBP11.77□□□□□ -0.53
SCAF1-203ENST00000598359 PSG4Q00888 419 aa11.77□□□□□ -0.53
SCAF1-203ENST00000598359 SEC23BQ15437 767 aa11.77□□□□□ -0.53
SCAF1-203ENST00000598359 ZBED5Q49AG3 693 aa11.77□□□□□ -0.53
SCAF1-203ENST00000598359 THEM4Q5T1C6 240 aa11.77□□□□□ -0.53
SCAF1-203ENST00000598359 FAM166AQ6J272 317 aa11.77□□□□□ -0.53
SCAF1-203ENST00000598359 ZNF774Q6NX45 483 aa11.77□□□□□ -0.53
SCAF1-203ENST00000598359 TMPRSS11FQ6ZWK6 438 aa11.77□□□□□ -0.53
SCAF1-203ENST00000598359 ZNF101Q8IZC7 436 aa11.77□□□□□ -0.53
SCAF1-203ENST00000598359 RNF113BQ8IZP6 322 aaKnown RBP11.77□□□□□ -0.53
SCAF1-203ENST00000598359 ZNF540Q8NDQ6 660 aa11.77□□□□□ -0.53
SCAF1-203ENST00000598359 OR1J2Q8NGS2 313 aa11.77□□□□□ -0.53
SCAF1-203ENST00000598359 OR1J1Q8NGS3 322 aa11.77□□□□□ -0.53
SCAF1-203ENST00000598359 OR52J3Q8NH60 311 aa11.77□□□□□ -0.53
SCAF1-203ENST00000598359 SYNPRQ8TBG9 265 aa11.77□□□□□ -0.53
SCAF1-203ENST00000598359 YIPF5Q969M3 257 aa11.77□□□□□ -0.53
SCAF1-203ENST00000598359 RASD2Q96D21 266 aa11.77□□□□□ -0.53
SCAF1-203ENST00000598359 POM121L2Q96KW2 1035 aa11.77□□□□□ -0.53
SCAF1-203ENST00000598359 C7orf34Q96L11 122 aa11.77□□□□□ -0.53
SCAF1-203ENST00000598359 WNT5BQ9H1J7 359 aa11.77□□□□□ -0.53
SCAF1-203ENST00000598359 MS4A5Q9H3V2 200 aa11.77□□□□□ -0.53
SCAF1-203ENST00000598359 C1orf198Q9H425 327 aa11.77□□□□□ -0.53
SCAF1-203ENST00000598359 EMC7Q9NPA0 242 aa11.77□□□□□ -0.53
SCAF1-203ENST00000598359 CDC42EP3Q9UKI2 254 aa11.77□□□□□ -0.53
SCAF1-203ENST00000598359 KCNS2Q9ULS6 477 aa11.77□□□□□ -0.53
SCAF1-203ENST00000598359 MALRD1Q5VYJ5 2156 aa11.77□□□□□ -0.53
SCAF1-203ENST00000598359 SLC22A23A1A5C7 686 aa11.76□□□□□ -0.53
SCAF1-203ENST00000598359 HTR3EA5X5Y0 456 aa11.76□□□□□ -0.53
SCAF1-203ENST00000598359 A6NIZ1 184 aa11.76□□□□□ -0.53
SCAF1-203ENST00000598359 EI24O14681 340 aa11.76□□□□□ -0.53
SCAF1-203ENST00000598359 WNT9BO14905 357 aa11.76□□□□□ -0.53
SCAF1-203ENST00000598359 TNFAIP8O95379 198 aa11.76□□□□□ -0.53
SCAF1-203ENST00000598359 PTHP01270 115 aa11.76□□□□□ -0.53
SCAF1-203ENST00000598359 H1F0P07305 194 aaKnown RBP11.76□□□□□ -0.53
SCAF1-203ENST00000598359 TACSTD2P09758 323 aa11.76□□□□□ -0.53
SCAF1-203ENST00000598359 FAM157CP0CG43 387 aa11.76□□□□□ -0.53
SCAF1-203ENST00000598359 ZNF250P15622 560 aa11.76□□□□□ -0.53
SCAF1-203ENST00000598359 MPV17P39210 176 aa11.76□□□□□ -0.53
SCAF1-203ENST00000598359 RAP1BP61224 184 aa11.76□□□□□ -0.53
SCAF1-203ENST00000598359 RAP1AP62834 184 aa11.76□□□□□ -0.53
SCAF1-203ENST00000598359 ENDOGQ14249 297 aaKnown RBP11.76□□□□□ -0.53
SCAF1-203ENST00000598359 SLC36A3Q495N2 470 aa11.76□□□□□ -0.53
SCAF1-203ENST00000598359 MESTQ5EB52 335 aa11.76□□□□□ -0.53
SCAF1-203ENST00000598359 TMEM255AQ5JRV8 349 aa11.76□□□□□ -0.53
SCAF1-203ENST00000598359 FAM120AOSQ5T036 256 aa11.76□□□□□ -0.53
SCAF1-203ENST00000598359 FAM27BQ5VT28 67 aa11.76□□□□□ -0.53
SCAF1-203ENST00000598359 THSD4Q6ZMP0 1018 aa11.76□□□□□ -0.53
SCAF1-203ENST00000598359 RRM2BQ7LG56 351 aa11.76□□□□□ -0.53
SCAF1-203ENST00000598359 C11orf40Q8WZ69 217 aa11.76□□□□□ -0.53
SCAF1-203ENST00000598359 ADI1Q9BV57 179 aa11.76□□□□□ -0.53
SCAF1-203ENST00000598359 ZNF416Q9BWM5 594 aa11.76□□□□□ -0.53
SCAF1-203ENST00000598359 OR2H1Q9GZK4 316 aa11.76□□□□□ -0.53
SCAF1-203ENST00000598359 SHARPINQ9H0F6 387 aa11.76□□□□□ -0.53
SCAF1-203ENST00000598359 GABARAPL1Q9H0R8 117 aa11.76□□□□□ -0.53
SCAF1-203ENST00000598359 SMPD3Q9NY59 655 aaPredicted RBP11.76□□□□□ -0.53
SCAF1-203ENST00000598359 GRHPRQ9UBQ7 328 aa11.76□□□□□ -0.53
SCAF1-203ENST00000598359 IGLV3-9A0A075B6K5 115 aa11.75□□□□□ -0.53
SCAF1-203ENST00000598359 TEX13CA0A0J9YWL9 993 aa11.75□□□□□ -0.53
SCAF1-203ENST00000598359 H0YAE9 185 aa11.75□□□□□ -0.53
SCAF1-203ENST00000598359 CDC14BO60729 498 aa11.75□□□□□ -0.53
SCAF1-203ENST00000598359 CST1P01037 141 aa11.75□□□□□ -0.53
SCAF1-203ENST00000598359 CD14P08571 375 aa11.75□□□□□ -0.53
SCAF1-203ENST00000598359 CST2P09228 141 aa11.75□□□□□ -0.53
SCAF1-203ENST00000598359 SMIM18P0DKX4 95 aa11.75□□□□□ -0.53
SCAF1-203ENST00000598359 NR2C1P13056 603 aa11.75□□□□□ -0.53
SCAF1-203ENST00000598359 MYF6P23409 242 aa11.75□□□□□ -0.53
SCAF1-203ENST00000598359 RAD52P43351 418 aa11.75□□□□□ -0.53
SCAF1-203ENST00000598359 OMPP47874 163 aa11.75□□□□□ -0.53
SCAF1-203ENST00000598359 LIMS1P48059 325 aa11.75□□□□□ -0.53
SCAF1-203ENST00000598359 GDI2P50395 445 aaKnown RBP11.75□□□□□ -0.53
SCAF1-203ENST00000598359 ALDH3A2P51648 485 aa11.75□□□□□ -0.53
SCAF1-203ENST00000598359 CCL8P80075 99 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms