RNA–Protein interactions for RNA: ENST00000596399.1

LIM2-202, Transcript of lens intrinsic membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIM2, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-202ENST00000596399 UNQ6126/PRO20091Q6UXV3 157 aa13.55□□□□□ -0.24
LIM2-202ENST00000596399 OAFQ86UD1 273 aa13.55□□□□□ -0.24
LIM2-202ENST00000596399 SIKE1Q9BRV8 207 aa13.55□□□□□ -0.24
LIM2-202ENST00000596399 ELOVL3Q9HB03 270 aa13.55□□□□□ -0.24
LIM2-202ENST00000596399 TMEM106BQ9NUM4 274 aa13.55□□□□□ -0.24
LIM2-202ENST00000596399 CMTM6Q9NX76 183 aa13.55□□□□□ -0.24
LIM2-202ENST00000596399 ZNF69Q9UC07 566 aa13.55□□□□□ -0.24
LIM2-202ENST00000596399 PURGQ9UJV8 347 aaKnown RBP13.55□□□□□ -0.24
LIM2-202ENST00000596399 SOX21Q9Y651 276 aaPredicted RBP13.55□□□□□ -0.24
LIM2-202ENST00000596399 A0A087WUU8 490 aa13.54□□□□□ -0.24
LIM2-202ENST00000596399 GMNCA6NCL1 334 aa13.54□□□□□ -0.24
LIM2-202ENST00000596399 C12orf71A8MTZ7 269 aa13.54□□□□□ -0.24
LIM2-202ENST00000596399 KCNAB3O43448 404 aa13.54□□□□□ -0.24
LIM2-202ENST00000596399 DOK2O60496 412 aa13.54□□□□□ -0.24
LIM2-202ENST00000596399 ZNF205O95201 554 aa13.54□□□□□ -0.24
LIM2-202ENST00000596399 GATA3P23771 443 aa13.54□□□□□ -0.24
LIM2-202ENST00000596399 LIPAP38571 399 aa13.54□□□□□ -0.24
LIM2-202ENST00000596399 GUCA1AP43080 201 aaPredicted RBP13.54□□□□□ -0.24
LIM2-202ENST00000596399 HTR5AP47898 357 aa13.54□□□□□ -0.24
LIM2-202ENST00000596399 LIMS1P48059 325 aa13.54□□□□□ -0.24
LIM2-202ENST00000596399 ZMYND11Q15326 602 aa13.54□□□□□ -0.24
LIM2-202ENST00000596399 MESTQ5EB52 335 aa13.54□□□□□ -0.24
LIM2-202ENST00000596399 COQ5Q5HYK3 327 aa13.54□□□□□ -0.24
LIM2-202ENST00000596399 POU5F2Q8N7G0 328 aa13.54□□□□□ -0.24
LIM2-202ENST00000596399 SGMS2Q8NHU3 365 aa13.54□□□□□ -0.24
LIM2-202ENST00000596399 ITLN1Q8WWA0 313 aa13.54□□□□□ -0.24
LIM2-202ENST00000596399 CMBLQ96DG6 245 aa13.54□□□□□ -0.24
LIM2-202ENST00000596399 Q96M85 177 aa13.54□□□□□ -0.24
LIM2-202ENST00000596399 C1orf147Q96MC9 270 aaPredicted RBP13.54□□□□□ -0.24
LIM2-202ENST00000596399 ZNF48Q96MX3 618 aaPredicted RBP13.54□□□□□ -0.24
LIM2-202ENST00000596399 SIGLEC11Q96RL6 698 aa13.54□□□□□ -0.24
LIM2-202ENST00000596399 DIRC2Q96SL1 478 aa13.54□□□□□ -0.24
LIM2-202ENST00000596399 FNDC11Q9BVV2 318 aa13.54□□□□□ -0.24
LIM2-202ENST00000596399 TRRAPQ9Y4A5 3859 aa13.54□□□□□ -0.24
LIM2-202ENST00000596399 IGHV3-64DA0A0J9YX35 117 aa13.53□□□□□ -0.24
LIM2-202ENST00000596399 ELOVL7A1L3X0 281 aa13.53□□□□□ -0.24
LIM2-202ENST00000596399 A6NIZ1 184 aa13.53□□□□□ -0.24
LIM2-202ENST00000596399 H3BSA7 217 aa13.53□□□□□ -0.24
LIM2-202ENST00000596399 FOXH1O75593 365 aa13.53□□□□□ -0.24
LIM2-202ENST00000596399 SASH3O75995 380 aa13.53□□□□□ -0.24
LIM2-202ENST00000596399 NPPAP01160 153 aa13.53□□□□□ -0.24
LIM2-202ENST00000596399 CTLA4P16410 223 aa13.53□□□□□ -0.24
LIM2-202ENST00000596399 FPR2P25090 351 aa13.53□□□□□ -0.24
LIM2-202ENST00000596399 RPL4P36578 427 aaKnown RBP13.53□□□□□ -0.24
LIM2-202ENST00000596399 SLC6A9P48067 706 aa13.53□□□□□ -0.24
LIM2-202ENST00000596399 SLC9A3P48764 834 aa13.53□□□□□ -0.24
LIM2-202ENST00000596399 RAP1BP61224 184 aa13.53□□□□□ -0.24
LIM2-202ENST00000596399 RAP1AP62834 184 aa13.53□□□□□ -0.24
LIM2-202ENST00000596399 DBPQ10586 325 aaPredicted RBP13.53□□□□□ -0.24
LIM2-202ENST00000596399 ZNF154Q13106 437 aa13.53□□□□□ -0.24
LIM2-202ENST00000596399 TRAM2Q15035 370 aa13.53□□□□□ -0.24
LIM2-202ENST00000596399 FAM205BPQ63HN1 556 aa13.53□□□□□ -0.24
LIM2-202ENST00000596399 VASH1Q7L8A9 365 aaPredicted RBP13.53□□□□□ -0.24
LIM2-202ENST00000596399 JAZF1Q86VZ6 243 aa13.53□□□□□ -0.24
LIM2-202ENST00000596399 TREML1Q86YW5 311 aa13.53□□□□□ -0.24
LIM2-202ENST00000596399 C1orf174Q8IYL3 243 aa13.53□□□□□ -0.24
LIM2-202ENST00000596399 OFCC1Q8IZS5 231 aa13.53□□□□□ -0.24
LIM2-202ENST00000596399 OR5AS1Q8N127 324 aa13.53□□□□□ -0.24
LIM2-202ENST00000596399 ZNF283Q8N7M2 679 aa13.53□□□□□ -0.24
LIM2-202ENST00000596399 RCN3Q96D15 328 aa13.53□□□□□ -0.24
LIM2-202ENST00000596399 RASD2Q96D21 266 aa13.53□□□□□ -0.24
LIM2-202ENST00000596399 ZMYND19Q96E35 227 aaPredicted RBP13.53□□□□□ -0.24
LIM2-202ENST00000596399 RERGLQ9H628 205 aa13.53□□□□□ -0.24
LIM2-202ENST00000596399 PATZ1Q9HBE1 687 aaKnown RBP13.53□□□□□ -0.24
LIM2-202ENST00000596399 DDX28Q9NUL7 540 aaKnown RBP13.53□□□□□ -0.24
LIM2-202ENST00000596399 FGFR1OP2Q9NVK5 253 aa13.53□□□□□ -0.24
LIM2-202ENST00000596399 ARMCX1Q9P291 453 aa13.53□□□□□ -0.24
LIM2-202ENST00000596399 CGGBP1Q9UFW8 167 aaPredicted RBP13.53□□□□□ -0.24
LIM2-202ENST00000596399 NDRG4Q9ULP0 352 aaKnown RBP13.53□□□□□ -0.24
LIM2-202ENST00000596399 IGHV3OR16-10A0A075B7F0 116 aa13.52□□□□□ -0.25
LIM2-202ENST00000596399 BBIP1A8MTZ0 92 aa13.52□□□□□ -0.25
LIM2-202ENST00000596399 SGCEO43556 437 aa13.52□□□□□ -0.25
LIM2-202ENST00000596399 ZNF682O95780 498 aa13.52□□□□□ -0.25
LIM2-202ENST00000596399 GPANK1O95872 356 aa13.52□□□□□ -0.25
LIM2-202ENST00000596399 IFNW1P05000 195 aa13.52□□□□□ -0.25
LIM2-202ENST00000596399 DBHP09172 617 aa13.52□□□□□ -0.25
LIM2-202ENST00000596399 GSTM3P21266 225 aa13.52□□□□□ -0.25
LIM2-202ENST00000596399 KITLGP21583 273 aa13.52□□□□□ -0.25
LIM2-202ENST00000596399 BTG1P62324 171 aa13.52□□□□□ -0.25
LIM2-202ENST00000596399 HLXQ14774 488 aaPredicted RBP13.52□□□□□ -0.25
LIM2-202ENST00000596399 TUSC1Q2TAM9 212 aa13.52□□□□□ -0.25
LIM2-202ENST00000596399 ZMAT1Q5H9K5 638 aa13.52□□□□□ -0.25
LIM2-202ENST00000596399 ARMCX4Q5H9R4 360 aa13.52□□□□□ -0.25
LIM2-202ENST00000596399 ARL9Q6T311 187 aa13.52□□□□□ -0.25
LIM2-202ENST00000596399 ZNF730Q6ZMV8 503 aa13.52□□□□□ -0.25
LIM2-202ENST00000596399 HDXQ7Z353 690 aa13.52□□□□□ -0.25
LIM2-202ENST00000596399 TSEN54Q7Z6J9 526 aaKnown RBP13.52□□□□□ -0.25
LIM2-202ENST00000596399 SYT9Q86SS6 491 aa13.52□□□□□ -0.25
LIM2-202ENST00000596399 LRRC28Q86X40 367 aaPredicted RBP13.52□□□□□ -0.25
LIM2-202ENST00000596399 FNDC8Q8TC99 324 aa13.52□□□□□ -0.25
LIM2-202ENST00000596399 SAMD8Q96LT4 415 aa13.52□□□□□ -0.25
LIM2-202ENST00000596399 OR2V2Q96R30 315 aa13.52□□□□□ -0.25
LIM2-202ENST00000596399 NTN4Q9HB63 628 aa13.52□□□□□ -0.25
LIM2-202ENST00000596399 TBCCD1Q9NVR7 557 aa13.52□□□□□ -0.25
LIM2-202ENST00000596399 GID8Q9NWU2 228 aa13.52□□□□□ -0.25
LIM2-202ENST00000596399 GRHPRQ9UBQ7 328 aa13.52□□□□□ -0.25
LIM2-202ENST00000596399 IL20RAQ9UHF4 553 aa13.52□□□□□ -0.25
LIM2-202ENST00000596399 NUP50Q9UKX7 468 aa13.52□□□□□ -0.25
LIM2-202ENST00000596399 PPP1R3CQ9UQK1 317 aa13.52□□□□□ -0.25
LIM2-202ENST00000596399 AUP1Q9Y679 476 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms