RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 DOK2O60496 412 aa14.89□□□□□ -0.03
SHKBP1-212ENST00000596163 MPZL1O95297 269 aa14.89□□□□□ -0.03
SHKBP1-212ENST00000596163 IGHV4-39P01824 125 aa14.89□□□□□ -0.03
SHKBP1-212ENST00000596163 HMGN1P05114 100 aa14.89□□□□□ -0.03
SHKBP1-212ENST00000596163 FAM157BP0CG42 384 aa14.89□□□□□ -0.03
SHKBP1-212ENST00000596163 GAAP10253 952 aa14.89□□□□□ -0.03
SHKBP1-212ENST00000596163 ZNF823P16415 610 aa14.89□□□□□ -0.03
SHKBP1-212ENST00000596163 EFNA4P52798 201 aa14.89□□□□□ -0.03
SHKBP1-212ENST00000596163 BLVRAP53004 296 aa14.89□□□□□ -0.03
SHKBP1-212ENST00000596163 TEKQ02763 1124 aa14.89□□□□□ -0.03
SHKBP1-212ENST00000596163 CLEC12BQ2HXU8 276 aa14.89□□□□□ -0.03
SHKBP1-212ENST00000596163 ZDHHC13Q8IUH4 622 aa14.89□□□□□ -0.03
SHKBP1-212ENST00000596163 SVOPLQ8N434 492 aa14.89□□□□□ -0.03
SHKBP1-212ENST00000596163 PAQR4Q8N4S7 273 aaPredicted RBP14.89□□□□□ -0.03
SHKBP1-212ENST00000596163 CYB561A3Q8NBI2 242 aa14.89□□□□□ -0.03
SHKBP1-212ENST00000596163 SLC26A10Q8NG04 563 aa14.89□□□□□ -0.03
SHKBP1-212ENST00000596163 OR2AJ1Q8NGZ0 328 aa14.89□□□□□ -0.03
SHKBP1-212ENST00000596163 RAB3IPQ96QF0 476 aaPredicted RBP14.89□□□□□ -0.03
SHKBP1-212ENST00000596163 DDOQ99489 341 aa14.89□□□□□ -0.03
SHKBP1-212ENST00000596163 VRK1Q99986 396 aaPredicted RBP14.89□□□□□ -0.03
SHKBP1-212ENST00000596163 DYNLRB1Q9NP97 96 aa14.89□□□□□ -0.03
SHKBP1-212ENST00000596163 CMC2Q9NRP2 79 aa14.89□□□□□ -0.03
SHKBP1-212ENST00000596163 ATPIF1Q9UII2 106 aa14.89□□□□□ -0.03
SHKBP1-212ENST00000596163 GDF2Q9UK05 429 aaPredicted RBP14.89□□□□□ -0.03
SHKBP1-212ENST00000596163 LOC100509620A0A075B734 347 aa14.88□□□□□ -0.03
SHKBP1-212ENST00000596163 SYNGR3O43761 229 aa14.88□□□□□ -0.03
SHKBP1-212ENST00000596163 SSX4O60224 188 aa14.88□□□□□ -0.03
SHKBP1-212ENST00000596163 GPRIN2O60269 458 aa14.88□□□□□ -0.03
SHKBP1-212ENST00000596163 F12P00748 615 aaPredicted RBP14.88□□□□□ -0.03
SHKBP1-212ENST00000596163 PAICSP22234 425 aaKnown RBP14.88□□□□□ -0.03
SHKBP1-212ENST00000596163 TUBG1P23258 451 aa14.88□□□□□ -0.03
SHKBP1-212ENST00000596163 HTR5AP47898 357 aa14.88□□□□□ -0.03
SHKBP1-212ENST00000596163 SLC25A1P53007 311 aa14.88□□□□□ -0.03
SHKBP1-212ENST00000596163 ACTR3P61158 418 aa14.88□□□□□ -0.03
SHKBP1-212ENST00000596163 GINS1Q14691 196 aa14.88□□□□□ -0.03
SHKBP1-212ENST00000596163 ZNF362Q5T0B9 420 aaPredicted RBP14.88□□□□□ -0.03
SHKBP1-212ENST00000596163 ZFP1Q6P2D0 407 aa14.88□□□□□ -0.03
SHKBP1-212ENST00000596163 VASH1Q7L8A9 365 aaPredicted RBP14.88□□□□□ -0.03
SHKBP1-212ENST00000596163 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.88□□□□□ -0.03
SHKBP1-212ENST00000596163 HS3ST5Q8IZT8 346 aa14.88□□□□□ -0.03
SHKBP1-212ENST00000596163 OR1J1Q8NGS3 322 aa14.88□□□□□ -0.03
SHKBP1-212ENST00000596163 SYNPRQ8TBG9 265 aa14.88□□□□□ -0.03
SHKBP1-212ENST00000596163 IPCEF1Q8WWN9 437 aaPredicted RBP14.88□□□□□ -0.03
SHKBP1-212ENST00000596163 C4orf45Q96LM5 186 aa14.88□□□□□ -0.03
SHKBP1-212ENST00000596163 DCLRE1CQ96SD1 692 aaKnown RBP14.88□□□□□ -0.03
SHKBP1-212ENST00000596163 MS4A5Q9H3V2 200 aa14.88□□□□□ -0.03
SHKBP1-212ENST00000596163 FN3KQ9H479 309 aa14.88□□□□□ -0.03
SHKBP1-212ENST00000596163 TUBG2Q9NRH3 451 aa14.88□□□□□ -0.03
SHKBP1-212ENST00000596163 PAPOLBQ9NRJ5 636 aaKnown RBP14.88□□□□□ -0.03
SHKBP1-212ENST00000596163 ENOPH1Q9UHY7 261 aa14.88□□□□□ -0.03
SHKBP1-212ENST00000596163 DUSP13Q9UII6 198 aa14.88□□□□□ -0.03
SHKBP1-212ENST00000596163 PLCE1Q9P212 2302 aa14.88□□□□□ -0.03
SHKBP1-212ENST00000596163 USF3Q68DE3 2245 aa14.87□□□□□ -0.03
SHKBP1-212ENST00000596163 TMEM129A0AVI4 362 aa14.87□□□□□ -0.03
SHKBP1-212ENST00000596163 FAM171A2A8MVW0 826 aa14.87□□□□□ -0.03
SHKBP1-212ENST00000596163 NDUFS7O75251 213 aa14.87□□□□□ -0.03
SHKBP1-212ENST00000596163 ZNF23P17027 643 aa14.87□□□□□ -0.03
SHKBP1-212ENST00000596163 FMO3P31513 532 aa14.87□□□□□ -0.03
SHKBP1-212ENST00000596163 CRMP1Q14194 572 aa14.87□□□□□ -0.03
SHKBP1-212ENST00000596163 ZNF718Q3SXZ3 478 aa14.87□□□□□ -0.03
SHKBP1-212ENST00000596163 FAHD1Q6P587 224 aa14.87□□□□□ -0.03
SHKBP1-212ENST00000596163 ICA1LQ8NDH6 482 aa14.87□□□□□ -0.03
SHKBP1-212ENST00000596163 OR1F12Q8NHA8 337 aa14.87□□□□□ -0.03
SHKBP1-212ENST00000596163 NEU4Q8WWR8 484 aaPredicted RBP14.87□□□□□ -0.03
SHKBP1-212ENST00000596163 CENPNQ96H22 339 aaPredicted RBP14.87□□□□□ -0.03
SHKBP1-212ENST00000596163 C18orf12Q96KH6 178 aa14.87□□□□□ -0.03
SHKBP1-212ENST00000596163 COG8Q96MW5 612 aa14.87□□□□□ -0.03
SHKBP1-212ENST00000596163 RHNO1Q9BSD3 238 aa14.87□□□□□ -0.03
SHKBP1-212ENST00000596163 RBM4Q9BWF3 364 aaKnown RBP14.87□□□□□ -0.03
SHKBP1-212ENST00000596163 MRPL37Q9BZE1 423 aaKnown RBP14.87□□□□□ -0.03
SHKBP1-212ENST00000596163 HDHD2Q9H0R4 259 aa14.87□□□□□ -0.03
SHKBP1-212ENST00000596163 OR51B6Q9H340 312 aa14.87□□□□□ -0.03
SHKBP1-212ENST00000596163 SLCO1C1Q9NYB5 712 aa14.87□□□□□ -0.03
SHKBP1-212ENST00000596163 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.87□□□□□ -0.03
SHKBP1-212ENST00000596163 ARID1AO14497 2285 aa14.87□□□□□ -0.03
SHKBP1-212ENST00000596163 A0A1W2PPW3 197 aa14.86□□□□□ -0.03
SHKBP1-212ENST00000596163 OR6C6A6NF89 314 aa14.86□□□□□ -0.03
SHKBP1-212ENST00000596163 M0R233 179 aa14.86□□□□□ -0.03
SHKBP1-212ENST00000596163 ICMTO60725 284 aa14.86□□□□□ -0.03
SHKBP1-212ENST00000596163 GPANK1O95872 356 aa14.86□□□□□ -0.03
SHKBP1-212ENST00000596163 TFP02787 698 aa14.86□□□□□ -0.03
SHKBP1-212ENST00000596163 CSF3P09919 207 aa14.86□□□□□ -0.03
SHKBP1-212ENST00000596163 ZNF250P15622 560 aa14.86□□□□□ -0.03
SHKBP1-212ENST00000596163 GCH1P30793 250 aa14.86□□□□□ -0.03
SHKBP1-212ENST00000596163 PYCR1P32322 319 aa14.86□□□□□ -0.03
SHKBP1-212ENST00000596163 KLF3P57682 345 aaPredicted RBP14.86□□□□□ -0.03
SHKBP1-212ENST00000596163 ESRRGP62508 458 aa14.86□□□□□ -0.03
SHKBP1-212ENST00000596163 HIST1H3AP68431 136 aa14.86□□□□□ -0.03
SHKBP1-212ENST00000596163 ECH1Q13011 328 aa14.86□□□□□ -0.03
SHKBP1-212ENST00000596163 KPNB1Q14974 876 aaKnown RBP14.86□□□□□ -0.03
SHKBP1-212ENST00000596163 MEP1BQ16820 701 aa14.86□□□□□ -0.03
SHKBP1-212ENST00000596163 CCDC92Q53HC0 331 aaPredicted RBP14.86□□□□□ -0.03
SHKBP1-212ENST00000596163 HIST2H3PS2Q5TEC6 136 aa14.86□□□□□ -0.03
SHKBP1-212ENST00000596163 CLEC2AQ6UVW9 174 aa14.86□□□□□ -0.03
SHKBP1-212ENST00000596163 HIST2H3AQ71DI3 136 aa14.86□□□□□ -0.03
SHKBP1-212ENST00000596163 PARP8Q8N3A8 854 aa14.86□□□□□ -0.03
SHKBP1-212ENST00000596163 IQCF1Q8N6M8 205 aa14.86□□□□□ -0.03
SHKBP1-212ENST00000596163 OR9Q1Q8NGQ5 310 aa14.86□□□□□ -0.03
SHKBP1-212ENST00000596163 LRTOMTQ8WZ04 291 aa14.86□□□□□ -0.03
SHKBP1-212ENST00000596163 PLEKHA8Q96JA3 519 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms