RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 FUT4P22083 530 aa11.54□□□□□ -0.56
SHKBP1-208ENST00000595726 UCP2P55851 309 aa11.54□□□□□ -0.56
SHKBP1-208ENST00000595726 BIDP55957 195 aa11.54□□□□□ -0.56
SHKBP1-208ENST00000595726 NANOGNBQ7Z5D8 188 aa11.54□□□□□ -0.56
SHKBP1-208ENST00000595726 OFCC1Q8IZS5 231 aa11.54□□□□□ -0.56
SHKBP1-208ENST00000595726 OR10S1Q8NGN2 331 aa11.54□□□□□ -0.56
SHKBP1-208ENST00000595726 LINC01006Q8NI28 216 aa11.54□□□□□ -0.56
SHKBP1-208ENST00000595726 HSH2DQ96JZ2 352 aa11.54□□□□□ -0.56
SHKBP1-208ENST00000595726 SH3GL3Q99963 347 aa11.54□□□□□ -0.56
SHKBP1-208ENST00000595726 ULBP2Q9BZM5 246 aa11.54□□□□□ -0.56
SHKBP1-208ENST00000595726 DENND2DQ9H6A0 471 aaPredicted RBP11.54□□□□□ -0.56
SHKBP1-208ENST00000595726 PATZ1Q9HBE1 687 aaKnown RBP11.54□□□□□ -0.56
SHKBP1-208ENST00000595726 CDH20Q9HBT6 801 aa11.54□□□□□ -0.56
SHKBP1-208ENST00000595726 ASH2LQ9UBL3 628 aa11.54□□□□□ -0.56
SHKBP1-208ENST00000595726 ARL2BPQ9Y2Y0 163 aa11.54□□□□□ -0.56
SHKBP1-208ENST00000595726 SNX13Q9Y5W8 968 aa11.54□□□□□ -0.56
SHKBP1-208ENST00000595726 NPTNQ9Y639 398 aa11.54□□□□□ -0.56
SHKBP1-208ENST00000595726 ZSCAN5BA6NJL1 495 aa11.53□□□□□ -0.56
SHKBP1-208ENST00000595726 ZNF726A6NNF4 738 aa11.53□□□□□ -0.56
SHKBP1-208ENST00000595726 J3KTA2 159 aa11.53□□□□□ -0.56
SHKBP1-208ENST00000595726 PIP5K1CO60331 668 aa11.53□□□□□ -0.56
SHKBP1-208ENST00000595726 OR7A10O76100 309 aa11.53□□□□□ -0.56
SHKBP1-208ENST00000595726 IGHV3-13P01766 116 aa11.53□□□□□ -0.56
SHKBP1-208ENST00000595726 MT-ND5P03915 603 aa11.53□□□□□ -0.56
SHKBP1-208ENST00000595726 HIST1H2ABP04908 130 aa11.53□□□□□ -0.56
SHKBP1-208ENST00000595726 YAP1P46937 504 aaKnown RBP11.53□□□□□ -0.56
SHKBP1-208ENST00000595726 MMP15P51511 669 aa11.53□□□□□ -0.56
SHKBP1-208ENST00000595726 PROK1P58294 105 aa11.53□□□□□ -0.56
SHKBP1-208ENST00000595726 ST3GAL3Q11203 375 aa11.53□□□□□ -0.56
SHKBP1-208ENST00000595726 MELKQ14680 651 aa11.53□□□□□ -0.56
SHKBP1-208ENST00000595726 IFI44LQ53G44 452 aa11.53□□□□□ -0.56
SHKBP1-208ENST00000595726 SPATA46Q5T0L3 261 aa11.53□□□□□ -0.56
SHKBP1-208ENST00000595726 SLC35D2Q76EJ3 337 aa11.53□□□□□ -0.56
SHKBP1-208ENST00000595726 HIST3H2AQ7L7L0 130 aa11.53□□□□□ -0.56
SHKBP1-208ENST00000595726 RBM15BQ8NDT2 890 aaKnown RBP11.53□□□□□ -0.56
SHKBP1-208ENST00000595726 OR6N1Q8NGY5 312 aa11.53□□□□□ -0.56
SHKBP1-208ENST00000595726 OR6X1Q8NH79 312 aa11.53□□□□□ -0.56
SHKBP1-208ENST00000595726 MRAPQ8TCY5 172 aa11.53□□□□□ -0.56
SHKBP1-208ENST00000595726 LIPHQ8WWY8 451 aa11.53□□□□□ -0.56
SHKBP1-208ENST00000595726 HIST1H2ACQ93077 130 aa11.53□□□□□ -0.56
SHKBP1-208ENST00000595726 FAM162AQ96A26 154 aa11.53□□□□□ -0.56
SHKBP1-208ENST00000595726 SGTBQ96EQ0 304 aa11.53□□□□□ -0.56
SHKBP1-208ENST00000595726 DIRC2Q96SL1 478 aa11.53□□□□□ -0.56
SHKBP1-208ENST00000595726 B3GAT2Q9NPZ5 323 aa11.53□□□□□ -0.56
SHKBP1-208ENST00000595726 MAN2C1Q9NTJ4 1040 aa11.53□□□□□ -0.56
SHKBP1-208ENST00000595726 MED31Q9Y3C7 131 aa11.53□□□□□ -0.56
SHKBP1-208ENST00000595726 EPPK1P58107 5090 aaKnown RBP11.53□□□□□ -0.56
SHKBP1-208ENST00000595726 DNAH9Q9NYC9 4486 aa11.52□□□□□ -0.56
SHKBP1-208ENST00000595726 BLOC1S5-TXNDC5H3BN57 136 aa11.52□□□□□ -0.57
SHKBP1-208ENST00000595726 FFAR1O14842 300 aa11.52□□□□□ -0.57
SHKBP1-208ENST00000595726 DCTN3O75935 186 aa11.52□□□□□ -0.57
SHKBP1-208ENST00000595726 CLPXO76031 633 aa11.52□□□□□ -0.57
SHKBP1-208ENST00000595726 TSPAN19P0C672 248 aa11.52□□□□□ -0.57
SHKBP1-208ENST00000595726 FUT1P19526 365 aa11.52□□□□□ -0.57
SHKBP1-208ENST00000595726 IFNA8P32881 189 aa11.52□□□□□ -0.57
SHKBP1-208ENST00000595726 MPV17P39210 176 aa11.52□□□□□ -0.57
SHKBP1-208ENST00000595726 CSNK1A1P48729 337 aa11.52□□□□□ -0.57
SHKBP1-208ENST00000595726 RPL18Q07020 188 aaKnown RBP11.52□□□□□ -0.57
SHKBP1-208ENST00000595726 SLC3A1Q07837 685 aa11.52□□□□□ -0.57
SHKBP1-208ENST00000595726 FAM209AQ5JX71 171 aa11.52□□□□□ -0.57
SHKBP1-208ENST00000595726 VAX1Q5SQQ9 334 aa11.52□□□□□ -0.57
SHKBP1-208ENST00000595726 KPRPQ5T749 579 aaPredicted RBP11.52□□□□□ -0.57
SHKBP1-208ENST00000595726 FKBP9P1Q75LS8 142 aa11.52□□□□□ -0.57
SHKBP1-208ENST00000595726 KLHL36Q8N4N3 616 aa11.52□□□□□ -0.57
SHKBP1-208ENST00000595726 RNF148Q8N7C7 305 aa11.52□□□□□ -0.57
SHKBP1-208ENST00000595726 OR1J1Q8NGS3 322 aa11.52□□□□□ -0.57
SHKBP1-208ENST00000595726 TMEM54Q969K7 222 aa11.52□□□□□ -0.57
SHKBP1-208ENST00000595726 UPRTQ96BW1 309 aa11.52□□□□□ -0.57
SHKBP1-208ENST00000595726 SLC30A2Q9BRI3 323 aa11.52□□□□□ -0.57
SHKBP1-208ENST00000595726 PRDM13Q9H4Q3 707 aa11.52□□□□□ -0.57
SHKBP1-208ENST00000595726 RNF121Q9H920 327 aa11.52□□□□□ -0.57
SHKBP1-208ENST00000595726 ARL8BQ9NVJ2 186 aa11.52□□□□□ -0.57
SHKBP1-208ENST00000595726 ADA2Q9NZK5 511 aa11.52□□□□□ -0.57
SHKBP1-208ENST00000595726 RHCGQ9UBD6 479 aa11.52□□□□□ -0.57
SHKBP1-208ENST00000595726 FBXL3Q9UKT7 428 aa11.52□□□□□ -0.57
SHKBP1-208ENST00000595726 NOTCH3Q9UM47 2321 aa11.51□□□□□ -0.57
SHKBP1-208ENST00000595726 F13BP05160 661 aa11.51□□□□□ -0.57
SHKBP1-208ENST00000595726 PGA4P0DJD7 388 aa11.51□□□□□ -0.57
SHKBP1-208ENST00000595726 PGA3P0DJD8 388 aa11.51□□□□□ -0.57
SHKBP1-208ENST00000595726 PAX2Q02962 417 aa11.51□□□□□ -0.57
SHKBP1-208ENST00000595726 MOGQ16653 247 aa11.51□□□□□ -0.57
SHKBP1-208ENST00000595726 THEM4Q5T1C6 240 aa11.51□□□□□ -0.57
SHKBP1-208ENST00000595726 SAMD5Q5TGI4 173 aa11.51□□□□□ -0.57
SHKBP1-208ENST00000595726 GLYATQ6IB77 296 aa11.51□□□□□ -0.57
SHKBP1-208ENST00000595726 Q6YL49 198 aa11.51□□□□□ -0.57
SHKBP1-208ENST00000595726 PIWIL3Q7Z3Z3 882 aaKnown RBP11.51□□□□□ -0.57
SHKBP1-208ENST00000595726 TSEN54Q7Z6J9 526 aaKnown RBP11.51□□□□□ -0.57
SHKBP1-208ENST00000595726 LRRC28Q86X40 367 aaPredicted RBP11.51□□□□□ -0.57
SHKBP1-208ENST00000595726 PGAM4Q8N0Y7 254 aa11.51□□□□□ -0.57
SHKBP1-208ENST00000595726 SLC22A24Q8N4F4 322 aa11.51□□□□□ -0.57
SHKBP1-208ENST00000595726 FAM156AQ8NDB6 213 aa11.51□□□□□ -0.57
SHKBP1-208ENST00000595726 ZNF566Q969W8 418 aa11.51□□□□□ -0.57
SHKBP1-208ENST00000595726 SLC25A44Q96H78 314 aaPredicted RBP11.51□□□□□ -0.57
SHKBP1-208ENST00000595726 GLTPQ9NZD2 209 aa11.51□□□□□ -0.57
SHKBP1-208ENST00000595726 OR5V1Q9UGF6 321 aa11.51□□□□□ -0.57
SHKBP1-208ENST00000595726 TAGLN3Q9UI15 199 aa11.51□□□□□ -0.57
SHKBP1-208ENST00000595726 RPS6KA6Q9UK32 745 aa11.51□□□□□ -0.57
SHKBP1-208ENST00000595726 A8MXK9 166 aa11.5□□□□□ -0.57
SHKBP1-208ENST00000595726 H0YL77 283 aa11.5□□□□□ -0.57
SHKBP1-208ENST00000595726 IFI30P13284 250 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms