RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 NANPQ8TBE9 248 aa15.37■□□□□ 0.05
SHKBP1-205ENST00000594973 TCEAL3Q969E4 200 aa15.37■□□□□ 0.05
SHKBP1-205ENST00000594973 SLC25A36Q96CQ1 311 aa15.37■□□□□ 0.05
SHKBP1-205ENST00000594973 NECAB3Q96P71 396 aaPredicted RBP15.37■□□□□ 0.05
SHKBP1-205ENST00000594973 GPX7Q96SL4 187 aaPredicted RBP15.37■□□□□ 0.05
SHKBP1-205ENST00000594973 TSNAXQ99598 290 aaKnown RBP15.37■□□□□ 0.05
SHKBP1-205ENST00000594973 MYEF2Q9P2K5 600 aaKnown RBP15.37■□□□□ 0.05
SHKBP1-205ENST00000594973 TRAV1-2A0A0B4J238 106 aa15.36■□□□□ 0.05
SHKBP1-205ENST00000594973 TRBV11-1A0A0K0K1C0 115 aa15.36■□□□□ 0.05
SHKBP1-205ENST00000594973 EIF1BO60739 113 aaKnown RBP15.36■□□□□ 0.05
SHKBP1-205ENST00000594973 SLC25A12O75746 678 aa15.36■□□□□ 0.05
SHKBP1-205ENST00000594973 EIF3GO75821 320 aaKnown RBP eCLIP15.36■□□□□ 0.05
SHKBP1-205ENST00000594973 ACAA1P09110 424 aaPredicted RBP15.36■□□□□ 0.05
SHKBP1-205ENST00000594973 EIF1P41567 113 aaKnown RBP15.36■□□□□ 0.05
SHKBP1-205ENST00000594973 DIO1P49895 249 aa15.36■□□□□ 0.05
SHKBP1-205ENST00000594973 IL10RAQ13651 578 aa15.36■□□□□ 0.05
SHKBP1-205ENST00000594973 POMGNT2Q8NAT1 580 aa15.36■□□□□ 0.05
SHKBP1-205ENST00000594973 NFAM1Q8NET5 270 aaPredicted RBP15.36■□□□□ 0.05
SHKBP1-205ENST00000594973 ABHD4Q8TB40 342 aa15.36■□□□□ 0.05
SHKBP1-205ENST00000594973 SNX33Q8WV41 574 aa15.36■□□□□ 0.05
SHKBP1-205ENST00000594973 SMAD5Q99717 465 aaKnown RBP15.36■□□□□ 0.05
SHKBP1-205ENST00000594973 MFRPQ9BY79 579 aa15.36■□□□□ 0.05
SHKBP1-205ENST00000594973 SMOC1Q9H4F8 434 aa15.36■□□□□ 0.05
SHKBP1-205ENST00000594973 AUNIPQ9H7T9 357 aa15.36■□□□□ 0.05
SHKBP1-205ENST00000594973 MBD2Q9UBB5 411 aa15.36■□□□□ 0.05
SHKBP1-205ENST00000594973 COL5A1P20908 1838 aaPredicted RBP15.36■□□□□ 0.05
SHKBP1-205ENST00000594973 FXYD6-FXYD2A0A087WZ82 144 aa15.35■□□□□ 0.05
SHKBP1-205ENST00000594973 IGF2P01344 180 aa15.35■□□□□ 0.05
SHKBP1-205ENST00000594973 S100A9P06702 114 aaKnown RBP15.35■□□□□ 0.05
SHKBP1-205ENST00000594973 TAS2R43P59537 309 aa15.35■□□□□ 0.05
SHKBP1-205ENST00000594973 SIGLEC14Q08ET2 396 aa15.35■□□□□ 0.05
SHKBP1-205ENST00000594973 FAM122BQ7Z309 247 aa15.35■□□□□ 0.05
SHKBP1-205ENST00000594973 LDLRAD3Q86YD5 345 aa15.35■□□□□ 0.05
SHKBP1-205ENST00000594973 SPAG16Q8N0X2 631 aa15.35■□□□□ 0.05
SHKBP1-205ENST00000594973 LRRC75AQ8NAA5 344 aa15.35■□□□□ 0.05
SHKBP1-205ENST00000594973 ELP5Q8TE02 316 aa15.35■□□□□ 0.05
SHKBP1-205ENST00000594973 LIPHQ8WWY8 451 aa15.35■□□□□ 0.05
SHKBP1-205ENST00000594973 CRB3Q9BUF7 120 aa15.35■□□□□ 0.05
SHKBP1-205ENST00000594973 PTDSS2Q9BVG9 487 aa15.35■□□□□ 0.05
SHKBP1-205ENST00000594973 NMNAT2Q9BZQ4 307 aa15.35■□□□□ 0.05
SHKBP1-205ENST00000594973 FXYD6Q9H0Q3 95 aa15.35■□□□□ 0.05
SHKBP1-205ENST00000594973 GRHPRQ9UBQ7 328 aa15.35■□□□□ 0.05
SHKBP1-205ENST00000594973 TECTAO75443 2155 aa15.35■□□□□ 0.05
SHKBP1-205ENST00000594973 TNRC6BQ9UPQ9 1833 aaKnown RBP15.35■□□□□ 0.05
SHKBP1-205ENST00000594973 RAB19A4D1S5 217 aa15.35■□□□□ 0.05
SHKBP1-205ENST00000594973 GABARAPH6UMI1 98 aa15.35■□□□□ 0.05
SHKBP1-205ENST00000594973 PSMD9O00233 223 aa15.35■□□□□ 0.05
SHKBP1-205ENST00000594973 OR2T7P0C7T2 308 aa15.35■□□□□ 0.05
SHKBP1-205ENST00000594973 MGMTP16455 207 aa15.35■□□□□ 0.05
SHKBP1-205ENST00000594973 CNR1P21554 472 aa15.35■□□□□ 0.05
SHKBP1-205ENST00000594973 SDHBP21912 280 aa15.35■□□□□ 0.05
SHKBP1-205ENST00000594973 P2RX1P51575 399 aa15.35■□□□□ 0.05
SHKBP1-205ENST00000594973 SSTP61278 116 aa15.35■□□□□ 0.05
SHKBP1-205ENST00000594973 GGTLC2Q14390 218 aa15.35■□□□□ 0.05
SHKBP1-205ENST00000594973 ZNF385CQ66K41 422 aaPredicted RBP15.35■□□□□ 0.05
SHKBP1-205ENST00000594973 NHLRC1Q6VVB1 395 aa15.35■□□□□ 0.05
SHKBP1-205ENST00000594973 PRSS45Q7RTY3 260 aa15.35■□□□□ 0.05
SHKBP1-205ENST00000594973 LILRB2Q8N423 598 aa15.35■□□□□ 0.05
SHKBP1-205ENST00000594973 OR13C5Q8NGS8 318 aa15.35■□□□□ 0.05
SHKBP1-205ENST00000594973 OR2T27Q8NH04 317 aa15.35■□□□□ 0.05
SHKBP1-205ENST00000594973 SRA1Q9HD15 236 aaKnown RBP15.35■□□□□ 0.05
SHKBP1-205ENST00000594973 GNG8Q9UK08 70 aa15.35■□□□□ 0.05
SHKBP1-205ENST00000594973 PCNX3Q9H6A9 2034 aa15.34■□□□□ 0.05
SHKBP1-205ENST00000594973 UBE2QL1A1L167 161 aa15.34■□□□□ 0.05
SHKBP1-205ENST00000594973 C11orf98E9PRG8 122 aa15.34■□□□□ 0.05
SHKBP1-205ENST00000594973 SIGLEC5O15389 551 aa15.34■□□□□ 0.05
SHKBP1-205ENST00000594973 GP1BAP07359 652 aa15.34■□□□□ 0.05
SHKBP1-205ENST00000594973 SNRPBP14678 240 aaKnown RBP15.34■□□□□ 0.05
SHKBP1-205ENST00000594973 SDHAP31040 664 aa15.34■□□□□ 0.05
SHKBP1-205ENST00000594973 MPPED2Q15777 294 aa15.34■□□□□ 0.05
SHKBP1-205ENST00000594973 UBE2NLQ5JXB2 153 aa15.34■□□□□ 0.05
SHKBP1-205ENST00000594973 AVPI1Q5T686 147 aa15.34■□□□□ 0.05
SHKBP1-205ENST00000594973 FAM199XQ6PEV8 388 aaPredicted RBP15.34■□□□□ 0.05
SHKBP1-205ENST00000594973 PUSL1Q8N0Z8 303 aaKnown RBP15.34■□□□□ 0.05
SHKBP1-205ENST00000594973 ZNF511Q8NB15 262 aa15.34■□□□□ 0.05
SHKBP1-205ENST00000594973 GHSRQ92847 366 aa15.34■□□□□ 0.05
SHKBP1-205ENST00000594973 TSPAN32Q96QS1 320 aa15.34■□□□□ 0.05
SHKBP1-205ENST00000594973 SPSB2Q99619 263 aa15.34■□□□□ 0.05
SHKBP1-205ENST00000594973 WDR77Q9BQA1 342 aaPredicted RBP15.34■□□□□ 0.05
SHKBP1-205ENST00000594973 ALG12Q9BV10 488 aa15.34■□□□□ 0.05
SHKBP1-205ENST00000594973 F5H5P2 479 aa15.34■□□□□ 0.05
SHKBP1-205ENST00000594973 SPDEFO95238 335 aa15.34■□□□□ 0.05
SHKBP1-205ENST00000594973 EPXP11678 715 aa15.34■□□□□ 0.05
SHKBP1-205ENST00000594973 ATF1P18846 271 aa15.34■□□□□ 0.05
SHKBP1-205ENST00000594973 ISXQ2M1V0 245 aa15.34■□□□□ 0.05
SHKBP1-205ENST00000594973 C5orf46Q6UWT4 87 aa15.34■□□□□ 0.05
SHKBP1-205ENST00000594973 SKA3Q8IX90 412 aa15.34■□□□□ 0.05
SHKBP1-205ENST00000594973 GPR119Q8TDV5 335 aa15.34■□□□□ 0.05
SHKBP1-205ENST00000594973 PELI1Q96FA3 418 aa15.34■□□□□ 0.05
SHKBP1-205ENST00000594973 WDR89Q96FK6 387 aaPredicted RBP15.34■□□□□ 0.05
SHKBP1-205ENST00000594973 OR11A1Q9GZK7 315 aa15.34■□□□□ 0.05
SHKBP1-205ENST00000594973 MFFQ9GZY8 342 aa15.34■□□□□ 0.05
SHKBP1-205ENST00000594973 KLHL9Q9P2J3 617 aa15.34■□□□□ 0.05
SHKBP1-205ENST00000594973 CLEC4AQ9UMR7 237 aa15.34■□□□□ 0.05
SHKBP1-205ENST00000594973 TRAV36DV7A0A075B6V5 113 aa15.33■□□□□ 0.05
SHKBP1-205ENST00000594973 TMED7-TICAM2A0A0A6YYA0 188 aa15.33■□□□□ 0.05
SHKBP1-205ENST00000594973 TMEM218A2RU14 115 aa15.33■□□□□ 0.05
SHKBP1-205ENST00000594973 DCTN6O00399 190 aa15.33■□□□□ 0.05
SHKBP1-205ENST00000594973 KHDRBS3O75525 346 aaKnown RBP15.33■□□□□ 0.05
SHKBP1-205ENST00000594973 KRT33AO76009 404 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms