RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 PPP2R2BQ00005 443 aa22.25■■□□□ 1.15
TRIM28-204ENST00000594806 EFNB3Q15768 340 aa22.25■■□□□ 1.15
TRIM28-204ENST00000594806 ADIPOQQ15848 244 aa22.25■■□□□ 1.15
TRIM28-204ENST00000594806 C11orf71Q6IPW1 123 aa22.25■■□□□ 1.15
TRIM28-204ENST00000594806 KRT80Q6KB66 452 aa22.25■■□□□ 1.15
TRIM28-204ENST00000594806 STMN2Q93045 179 aa22.25■■□□□ 1.15
TRIM28-204ENST00000594806 PLEKHA8Q96JA3 519 aa22.25■■□□□ 1.15
TRIM28-204ENST00000594806 CDADC1Q9BWV3 514 aa22.25■■□□□ 1.15
TRIM28-204ENST00000594806 BCL2L14Q9BZR8 327 aa22.25■■□□□ 1.15
TRIM28-204ENST00000594806 EIF3KQ9UBQ5 218 aaKnown RBP22.25■■□□□ 1.15
TRIM28-204ENST00000594806 CMAHPQ9Y471 501 aa22.25■■□□□ 1.15
TRIM28-204ENST00000594806 CSMD1Q96PZ7 3565 aa22.24■■□□□ 1.15
TRIM28-204ENST00000594806 DOK2O60496 412 aa22.24■■□□□ 1.15
TRIM28-204ENST00000594806 TFP02787 698 aa22.24■■□□□ 1.15
TRIM28-204ENST00000594806 OR4A8P0C604 315 aa22.24■■□□□ 1.15
TRIM28-204ENST00000594806 ZNF823P16415 610 aa22.24■■□□□ 1.15
TRIM28-204ENST00000594806 SPI1P17947 270 aa22.24■■□□□ 1.15
TRIM28-204ENST00000594806 IGFBP5P24593 272 aa22.24■■□□□ 1.15
TRIM28-204ENST00000594806 FMO3P31513 532 aa22.24■■□□□ 1.15
TRIM28-204ENST00000594806 THBS4P35443 961 aa22.24■■□□□ 1.15
TRIM28-204ENST00000594806 HIST1H3AP68431 136 aa22.24■■□□□ 1.15
TRIM28-204ENST00000594806 PTGES3Q15185 160 aaKnown RBP22.24■■□□□ 1.15
TRIM28-204ENST00000594806 HIST2H3PS2Q5TEC6 136 aa22.24■■□□□ 1.15
TRIM28-204ENST00000594806 ZNF774Q6NX45 483 aa22.24■■□□□ 1.15
TRIM28-204ENST00000594806 VHLLQ6RSH7 139 aa22.24■■□□□ 1.15
TRIM28-204ENST00000594806 ARL9Q6T311 187 aa22.24■■□□□ 1.15
TRIM28-204ENST00000594806 HIST2H3AQ71DI3 136 aa22.24■■□□□ 1.15
TRIM28-204ENST00000594806 OR9Q1Q8NGQ5 310 aa22.24■■□□□ 1.15
TRIM28-204ENST00000594806 PLEK2Q9NYT0 353 aa22.24■■□□□ 1.15
TRIM28-204ENST00000594806 PMF1-BGLAPU3KQ54 211 aa22.24■■□□□ 1.15
TRIM28-204ENST00000594806 SAC3D1A6NKF1 404 aa22.23■■□□□ 1.15
TRIM28-204ENST00000594806 FAM171A2A8MVW0 826 aa22.23■■□□□ 1.15
TRIM28-204ENST00000594806 PRR23D1E9PI22 279 aaPredicted RBP22.23■■□□□ 1.15
TRIM28-204ENST00000594806 ICMTO60725 284 aa22.23■■□□□ 1.15
TRIM28-204ENST00000594806 GPANK1O95872 356 aa22.23■■□□□ 1.15
TRIM28-204ENST00000594806 PRR23D2P0DMB1 279 aaPredicted RBP22.23■■□□□ 1.15
TRIM28-204ENST00000594806 PYCR1P32322 319 aa22.23■■□□□ 1.15
TRIM28-204ENST00000594806 PTH2RP49190 550 aa22.23■■□□□ 1.15
TRIM28-204ENST00000594806 EVX1P49640 407 aa22.23■■□□□ 1.15
TRIM28-204ENST00000594806 RAB35Q15286 201 aa22.23■■□□□ 1.15
TRIM28-204ENST00000594806 SWI5Q1ZZU3 235 aa22.23■■□□□ 1.15
TRIM28-204ENST00000594806 SHEQ5VZ18 495 aa22.23■■□□□ 1.15
TRIM28-204ENST00000594806 PRSS57Q6UWY2 283 aa22.23■■□□□ 1.15
TRIM28-204ENST00000594806 SPNS3Q6ZMD2 512 aa22.23■■□□□ 1.15
TRIM28-204ENST00000594806 VASH1Q7L8A9 365 aaPredicted RBP22.23■■□□□ 1.15
TRIM28-204ENST00000594806 OR2AJ1Q8NGZ0 328 aa22.23■■□□□ 1.15
TRIM28-204ENST00000594806 IPCEF1Q8WWN9 437 aaPredicted RBP22.23■■□□□ 1.15
TRIM28-204ENST00000594806 CYB5R1Q9UHQ9 305 aa22.23■■□□□ 1.15
TRIM28-204ENST00000594806 LHFPL6Q9Y693 200 aa22.23■■□□□ 1.15
TRIM28-204ENST00000594806 ARFGEF3Q5TH69 2177 aa22.23■■□□□ 1.15
TRIM28-204ENST00000594806 LOC100509620A0A075B734 347 aa22.22■■□□□ 1.15
TRIM28-204ENST00000594806 C5orf49A4QMS7 147 aa22.22■■□□□ 1.15
TRIM28-204ENST00000594806 CCL2P13500 99 aa22.22■■□□□ 1.15
TRIM28-204ENST00000594806 UCP2P55851 309 aa22.22■■□□□ 1.15
TRIM28-204ENST00000594806 SNRPD2P62316 118 aaKnown RBP22.22■■□□□ 1.15
TRIM28-204ENST00000594806 MEP1BQ16820 701 aa22.22■■□□□ 1.15
TRIM28-204ENST00000594806 PQLC1Q8N2U9 271 aa22.22■■□□□ 1.15
TRIM28-204ENST00000594806 PTP4A1Q93096 173 aa22.22■■□□□ 1.15
TRIM28-204ENST00000594806 CIB1Q99828 191 aa22.22■■□□□ 1.15
TRIM28-204ENST00000594806 HDHD2Q9H0R4 259 aa22.22■■□□□ 1.15
TRIM28-204ENST00000594806 ELOVL3Q9HB03 270 aa22.22■■□□□ 1.15
TRIM28-204ENST00000594806 MRPL22Q9NWU5 206 aaKnown RBP22.22■■□□□ 1.15
TRIM28-204ENST00000594806 TMEFF2Q9UIK5 374 aaPredicted RBP22.22■■□□□ 1.15
TRIM28-204ENST00000594806 SYNGR3O43761 229 aa22.21■■□□□ 1.15
TRIM28-204ENST00000594806 MITFO75030 526 aaPredicted RBP22.21■■□□□ 1.15
TRIM28-204ENST00000594806 CCNOP22674 350 aa22.21■■□□□ 1.15
TRIM28-204ENST00000594806 GGT2P36268 569 aa22.21■■□□□ 1.15
TRIM28-204ENST00000594806 HTR5AP47898 357 aa22.21■■□□□ 1.15
TRIM28-204ENST00000594806 SNAPC1Q16533 368 aa22.21■■□□□ 1.15
TRIM28-204ENST00000594806 MST1LQ2TV78 715 aa22.21■■□□□ 1.15
TRIM28-204ENST00000594806 CCDC92Q53HC0 331 aaPredicted RBP22.21■■□□□ 1.15
TRIM28-204ENST00000594806 ELFN2Q5R3F8 820 aa22.21■■□□□ 1.15
TRIM28-204ENST00000594806 TMEM236Q5W0B7 351 aa22.21■■□□□ 1.15
TRIM28-204ENST00000594806 PAQR4Q8N4S7 273 aaPredicted RBP22.21■■□□□ 1.15
TRIM28-204ENST00000594806 OR1F12Q8NHA8 337 aa22.21■■□□□ 1.15
TRIM28-204ENST00000594806 MRPL24Q96A35 216 aaKnown RBP22.21■■□□□ 1.15
TRIM28-204ENST00000594806 DCLRE1CQ96SD1 692 aaKnown RBP22.21■■□□□ 1.15
TRIM28-204ENST00000594806 C9orf16Q9BUW7 83 aa22.21■■□□□ 1.15
TRIM28-204ENST00000594806 PLK3Q9H4B4 646 aa22.21■■□□□ 1.15
TRIM28-204ENST00000594806 USE1Q9NZ43 259 aa22.21■■□□□ 1.15
TRIM28-204ENST00000594806 ORC6Q9Y5N6 252 aa22.21■■□□□ 1.15
TRIM28-204ENST00000594806 OR6C6A6NF89 314 aa22.2■■□□□ 1.14
TRIM28-204ENST00000594806 ZAR1LA6NP61 321 aa22.2■■□□□ 1.14
TRIM28-204ENST00000594806 H7C417 338 aa22.2■■□□□ 1.14
TRIM28-204ENST00000594806 RER1O15258 196 aa22.2■■□□□ 1.14
TRIM28-204ENST00000594806 PRODHO43272 600 aa22.2■■□□□ 1.14
TRIM28-204ENST00000594806 GLCEO94923 617 aa22.2■■□□□ 1.14
TRIM28-204ENST00000594806 TUBG1P23258 451 aa22.2■■□□□ 1.14
TRIM28-204ENST00000594806 ATP5J2P56134 94 aa22.2■■□□□ 1.14
TRIM28-204ENST00000594806 ADAM8P78325 824 aa22.2■■□□□ 1.14
TRIM28-204ENST00000594806 ECH1Q13011 328 aa22.2■■□□□ 1.14
TRIM28-204ENST00000594806 PCK2Q16822 640 aa22.2■■□□□ 1.14
TRIM28-204ENST00000594806 TEX30Q5JUR7 227 aa22.2■■□□□ 1.14
TRIM28-204ENST00000594806 SLX4IPQ5VYV7 408 aa22.2■■□□□ 1.14
TRIM28-204ENST00000594806 RGS7BPQ6MZT1 257 aaPredicted RBP22.2■■□□□ 1.14
TRIM28-204ENST00000594806 SLC18B1Q6NT16 456 aa22.2■■□□□ 1.14
TRIM28-204ENST00000594806 ZSCAN2Q7Z7L9 614 aaPredicted RBP22.2■■□□□ 1.14
TRIM28-204ENST00000594806 OR51L1Q8NGJ5 315 aa22.2■■□□□ 1.14
TRIM28-204ENST00000594806 COQ7Q99807 217 aa22.2■■□□□ 1.14
TRIM28-204ENST00000594806 CACNG6Q9BXT2 260 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms