RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 GSTM3P21266 225 aa20.2■□□□□ 0.82
LSM4-202ENST00000593564 ZFP36P26651 326 aaKnown RBP20.2■□□□□ 0.82
LSM4-202ENST00000593564 SLC9A3P48764 834 aa20.2■□□□□ 0.82
LSM4-202ENST00000593564 TRAM2Q15035 370 aa20.2■□□□□ 0.82
LSM4-202ENST00000593564 FAM156AQ8NDB6 213 aa20.2■□□□□ 0.82
LSM4-202ENST00000593564 DVL3Q92997 716 aaPredicted RBP20.2■□□□□ 0.82
LSM4-202ENST00000593564 FNDC11Q9BVV2 318 aa20.2■□□□□ 0.82
LSM4-202ENST00000593564 NTN4Q9HB63 628 aa20.2■□□□□ 0.82
LSM4-202ENST00000593564 TMEM106BQ9NUM4 274 aa20.2■□□□□ 0.82
LSM4-202ENST00000593564 DCAF16Q9NXF7 216 aa20.2■□□□□ 0.82
LSM4-202ENST00000593564 LOC100653049A0A140TA62 436 aa20.19■□□□□ 0.82
LSM4-202ENST00000593564 KRT34O76011 436 aa20.19■□□□□ 0.82
LSM4-202ENST00000593564 IFNW1P05000 195 aa20.19■□□□□ 0.82
LSM4-202ENST00000593564 TROVE2P10155 538 aaKnown RBP eCLIP20.19■□□□□ 0.82
LSM4-202ENST00000593564 YAP1P46937 504 aaKnown RBP20.19■□□□□ 0.82
LSM4-202ENST00000593564 UBA52P62987 128 aaKnown RBP20.19■□□□□ 0.82
LSM4-202ENST00000593564 SCRN3Q0VDG4 424 aa20.19■□□□□ 0.82
LSM4-202ENST00000593564 RNF113BQ8IZP6 322 aaKnown RBP20.19■□□□□ 0.82
LSM4-202ENST00000593564 SPICQ8N5J4 248 aa20.19■□□□□ 0.82
LSM4-202ENST00000593564 OR13C2Q8NGS9 318 aa20.19■□□□□ 0.82
LSM4-202ENST00000593564 SAMD8Q96LT4 415 aa20.19■□□□□ 0.82
LSM4-202ENST00000593564 EMC7Q9NPA0 242 aa20.19■□□□□ 0.82
LSM4-202ENST00000593564 RHCGQ9UBD6 479 aa20.19■□□□□ 0.82
LSM4-202ENST00000593564 PURGQ9UJV8 347 aaKnown RBP20.19■□□□□ 0.82
LSM4-202ENST00000593564 POLR3KQ9Y2Y1 108 aaPredicted RBP20.19■□□□□ 0.82
LSM4-202ENST00000593564 SNX13Q9Y5W8 968 aa20.19■□□□□ 0.82
LSM4-202ENST00000593564 H7C1C5 153 aa20.18■□□□□ 0.82
LSM4-202ENST00000593564 SBK2P0C263 348 aa20.18■□□□□ 0.82
LSM4-202ENST00000593564 TNFSF4P23510 183 aa20.18■□□□□ 0.82
LSM4-202ENST00000593564 LCN6P62502 163 aa20.18■□□□□ 0.82
LSM4-202ENST00000593564 HNRNPA0Q13151 305 aaKnown RBP20.18■□□□□ 0.82
LSM4-202ENST00000593564 TUSC1Q2TAM9 212 aa20.18■□□□□ 0.82
LSM4-202ENST00000593564 TMEM155Q4W5P6 130 aa20.18■□□□□ 0.82
LSM4-202ENST00000593564 AWAT1Q58HT5 328 aa20.18■□□□□ 0.82
LSM4-202ENST00000593564 VTCN1Q7Z7D3 282 aa20.18■□□□□ 0.82
LSM4-202ENST00000593564 ZNF283Q8N7M2 679 aa20.18■□□□□ 0.82
LSM4-202ENST00000593564 DEFB108BQ8NET1 73 aa20.18■□□□□ 0.82
LSM4-202ENST00000593564 ACOT11Q8WXI4 607 aaPredicted RBP20.18■□□□□ 0.82
LSM4-202ENST00000593564 C22orf15Q8WYQ4 148 aa20.18■□□□□ 0.82
LSM4-202ENST00000593564 POP5Q969H6 163 aaKnown RBP20.18■□□□□ 0.82
LSM4-202ENST00000593564 DCLRE1CQ96SD1 692 aaKnown RBP20.18■□□□□ 0.82
LSM4-202ENST00000593564 POFUT1Q9H488 388 aa20.18■□□□□ 0.82
LSM4-202ENST00000593564 J3KTA2 159 aa20.17■□□□□ 0.82
LSM4-202ENST00000593564 FFAR1O14842 300 aa20.17■□□□□ 0.82
LSM4-202ENST00000593564 AHCYL1O43865 530 aa20.17■□□□□ 0.82
LSM4-202ENST00000593564 DOK2O60496 412 aa20.17■□□□□ 0.82
LSM4-202ENST00000593564 TNFRSF1AP19438 455 aa20.17■□□□□ 0.82
LSM4-202ENST00000593564 KITLGP21583 273 aa20.17■□□□□ 0.82
LSM4-202ENST00000593564 HTR5AP47898 357 aa20.17■□□□□ 0.82
LSM4-202ENST00000593564 KLHL36Q8N4N3 616 aa20.17■□□□□ 0.82
LSM4-202ENST00000593564 OR2Z1Q8NG97 314 aa20.17■□□□□ 0.82
LSM4-202ENST00000593564 PATZ1Q9HBE1 687 aaKnown RBP20.17■□□□□ 0.82
LSM4-202ENST00000593564 DDX28Q9NUL7 540 aaKnown RBP20.17■□□□□ 0.82
LSM4-202ENST00000593564 GRHPRQ9UBQ7 328 aa20.17■□□□□ 0.82
LSM4-202ENST00000593564 AP3M1Q9Y2T2 418 aa20.17■□□□□ 0.82
LSM4-202ENST00000593564 A0A087WUU8 490 aa20.16■□□□□ 0.82
LSM4-202ENST00000593564 SGCEO43556 437 aa20.16■□□□□ 0.82
LSM4-202ENST00000593564 CD14P08571 375 aa20.16■□□□□ 0.82
LSM4-202ENST00000593564 RPL4P36578 427 aaKnown RBP20.16■□□□□ 0.82
LSM4-202ENST00000593564 ZNF730Q6ZMV8 503 aa20.16■□□□□ 0.82
LSM4-202ENST00000593564 Q6ZR03 302 aa20.16■□□□□ 0.82
LSM4-202ENST00000593564 MBOAT2Q6ZWT7 520 aa20.16■□□□□ 0.82
LSM4-202ENST00000593564 VASH1Q7L8A9 365 aaPredicted RBP20.16■□□□□ 0.82
LSM4-202ENST00000593564 LRRC28Q86X40 367 aaPredicted RBP20.16■□□□□ 0.82
LSM4-202ENST00000593564 MMP26Q9NRE1 261 aa20.16■□□□□ 0.82
LSM4-202ENST00000593564 EGFL7Q9UHF1 273 aa20.16■□□□□ 0.82
LSM4-202ENST00000593564 ADAM18Q9Y3Q7 739 aa20.16■□□□□ 0.82
LSM4-202ENST00000593564 XKRYO14609 159 aa20.15■□□□□ 0.82
LSM4-202ENST00000593564 CDC42EP2O14613 210 aa20.15■□□□□ 0.82
LSM4-202ENST00000593564 ZNF26P17031 533 aaPredicted RBP20.15■□□□□ 0.82
LSM4-202ENST00000593564 GPR4P46093 362 aa20.15■□□□□ 0.82
LSM4-202ENST00000593564 BTG1P62324 171 aa20.15■□□□□ 0.82
LSM4-202ENST00000593564 MESTQ5EB52 335 aa20.15■□□□□ 0.82
LSM4-202ENST00000593564 CGB2Q6NT52 195 aa20.15■□□□□ 0.82
LSM4-202ENST00000593564 RBMS3Q6XE24 437 aaKnown RBP20.15■□□□□ 0.82
LSM4-202ENST00000593564 TMPRSS11FQ6ZWK6 438 aa20.15■□□□□ 0.82
LSM4-202ENST00000593564 HAVCR1Q96D42 359 aa20.15■□□□□ 0.82
LSM4-202ENST00000593564 CMBLQ96DG6 245 aa20.15■□□□□ 0.82
LSM4-202ENST00000593564 Q96M85 177 aa20.15■□□□□ 0.82
LSM4-202ENST00000593564 COG8Q96MW5 612 aa20.15■□□□□ 0.82
LSM4-202ENST00000593564 SIGLEC11Q96RL6 698 aa20.15■□□□□ 0.82
LSM4-202ENST00000593564 FGFR1OP2Q9NVK5 253 aa20.15■□□□□ 0.82
LSM4-202ENST00000593564 CMTM6Q9NX76 183 aa20.15■□□□□ 0.82
LSM4-202ENST00000593564 IL19Q9UHD0 177 aa20.15■□□□□ 0.82
LSM4-202ENST00000593564 STARD10Q9Y365 291 aa20.15■□□□□ 0.82
LSM4-202ENST00000593564 PPIAL4AQ9Y536 164 aa20.15■□□□□ 0.82
LSM4-202ENST00000593564 CAPN7Q9Y6W3 813 aa20.15■□□□□ 0.82
LSM4-202ENST00000593564 TEX13CA0A0J9YWL9 993 aa20.14■□□□□ 0.81
LSM4-202ENST00000593564 PRSS37A4D1T9 235 aa20.14■□□□□ 0.81
LSM4-202ENST00000593564 A8MXK9 166 aa20.14■□□□□ 0.81
LSM4-202ENST00000593564 TRAPPC2LH3BP13 241 aa20.14■□□□□ 0.81
LSM4-202ENST00000593564 SURF4O15260 269 aa20.14■□□□□ 0.81
LSM4-202ENST00000593564 ZNF12P17014 697 aa20.14■□□□□ 0.81
LSM4-202ENST00000593564 SLC6A9P48067 706 aa20.14■□□□□ 0.81
LSM4-202ENST00000593564 ZNF154Q13106 437 aa20.14■□□□□ 0.81
LSM4-202ENST00000593564 AQP6Q13520 282 aa20.14■□□□□ 0.81
LSM4-202ENST00000593564 ZBED5Q49AG3 693 aa20.14■□□□□ 0.81
LSM4-202ENST00000593564 IFI44LQ53G44 452 aa20.14■□□□□ 0.81
LSM4-202ENST00000593564 ARMCX4Q5H9R4 360 aa20.14■□□□□ 0.81
LSM4-202ENST00000593564 TBPL2Q6SJ96 375 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms