RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 AP4S1Q9Y587 144 aa9.91□□□□□ -0.82
VMP1-211ENST00000591315 TIMM10BQ9Y5J6 103 aa9.91□□□□□ -0.82
VMP1-211ENST00000591315 ARRDC5A6NEK1 342 aa9.9□□□□□ -0.82
VMP1-211ENST00000591315 FAM183AA6NL82 134 aa9.9□□□□□ -0.82
VMP1-211ENST00000591315 C12orf71A8MTZ7 269 aa9.9□□□□□ -0.82
VMP1-211ENST00000591315 B9A039 149 aa9.9□□□□□ -0.82
VMP1-211ENST00000591315 H3BN98 237 aa9.9□□□□□ -0.82
VMP1-211ENST00000591315 EBAG9O00559 213 aa9.9□□□□□ -0.82
VMP1-211ENST00000591315 SMAD7O15105 426 aaKnown RBP9.9□□□□□ -0.82
VMP1-211ENST00000591315 ENTPD5O75356 428 aa9.9□□□□□ -0.82
VMP1-211ENST00000591315 CIB2O75838 187 aa9.9□□□□□ -0.82
VMP1-211ENST00000591315 NGFP01138 241 aa9.9□□□□□ -0.82
VMP1-211ENST00000591315 DBHP09172 617 aa9.9□□□□□ -0.82
VMP1-211ENST00000591315 CRABP1P29762 137 aa9.9□□□□□ -0.82
VMP1-211ENST00000591315 APLNRP35414 380 aa9.9□□□□□ -0.82
VMP1-211ENST00000591315 GLRXP35754 106 aa9.9□□□□□ -0.82
VMP1-211ENST00000591315 GUCA1AP43080 201 aaPredicted RBP9.9□□□□□ -0.82
VMP1-211ENST00000591315 ALDH3B1P43353 468 aa9.9□□□□□ -0.82
VMP1-211ENST00000591315 GDI2P50395 445 aaKnown RBP9.9□□□□□ -0.82
VMP1-211ENST00000591315 DAPP51397 102 aa9.9□□□□□ -0.82
VMP1-211ENST00000591315 UCP2P55851 309 aa9.9□□□□□ -0.82
VMP1-211ENST00000591315 GALK2Q01415 458 aa9.9□□□□□ -0.82
VMP1-211ENST00000591315 TEKQ02763 1124 aa9.9□□□□□ -0.82
VMP1-211ENST00000591315 GINS1Q14691 196 aa9.9□□□□□ -0.82
VMP1-211ENST00000591315 EFNB3Q15768 340 aa9.9□□□□□ -0.82
VMP1-211ENST00000591315 ATP6AP1Q15904 470 aa9.9□□□□□ -0.82
VMP1-211ENST00000591315 KCNMB1Q16558 191 aa9.9□□□□□ -0.82
VMP1-211ENST00000591315 CLEC12BQ2HXU8 276 aa9.9□□□□□ -0.82
VMP1-211ENST00000591315 TBC1D28Q2M2D7 210 aa9.9□□□□□ -0.82
VMP1-211ENST00000591315 RPL13AP3Q6NVV1 102 aa9.9□□□□□ -0.82
VMP1-211ENST00000591315 SHQ1Q6PI26 577 aaKnown RBP9.9□□□□□ -0.82
VMP1-211ENST00000591315 PRSS57Q6UWY2 283 aa9.9□□□□□ -0.82
VMP1-211ENST00000591315 RFPL4BQ6ZWI9 263 aa9.9□□□□□ -0.82
VMP1-211ENST00000591315 VASH1Q7L8A9 365 aaPredicted RBP9.9□□□□□ -0.82
VMP1-211ENST00000591315 ATG16L2Q8NAA4 619 aa9.9□□□□□ -0.82
VMP1-211ENST00000591315 ZNF511Q8NB15 262 aa9.9□□□□□ -0.82
VMP1-211ENST00000591315 OR2T33Q8NG76 320 aa9.9□□□□□ -0.82
VMP1-211ENST00000591315 MRPL24Q96A35 216 aaKnown RBP9.9□□□□□ -0.82
VMP1-211ENST00000591315 TRMT61AQ96FX7 289 aaKnown RBP9.9□□□□□ -0.82
VMP1-211ENST00000591315 SNX18Q96RF0 628 aa9.9□□□□□ -0.82
VMP1-211ENST00000591315 VRK1Q99986 396 aaPredicted RBP9.9□□□□□ -0.82
VMP1-211ENST00000591315 RBM4Q9BWF3 364 aaKnown RBP9.9□□□□□ -0.82
VMP1-211ENST00000591315 SEMA6AQ9H2E6 1030 aa9.9□□□□□ -0.82
VMP1-211ENST00000591315 YY1AP1Q9H869 796 aa9.9□□□□□ -0.82
VMP1-211ENST00000591315 DUSP13Q9UII6 198 aa9.9□□□□□ -0.82
VMP1-211ENST00000591315 FBXL3Q9UKT7 428 aa9.9□□□□□ -0.82
VMP1-211ENST00000591315 CMAHPQ9Y471 501 aa9.9□□□□□ -0.82
VMP1-211ENST00000591315 NF1P21359 2839 aa9.9□□□□□ -0.82
VMP1-211ENST00000591315 ZFHX3Q15911 3703 aa9.89□□□□□ -0.83
VMP1-211ENST00000591315 NSD1Q96L73 2696 aaPredicted RBP9.89□□□□□ -0.83
VMP1-211ENST00000591315 IGHV4-30-2A0A087WSY4 118 aa9.89□□□□□ -0.83
VMP1-211ENST00000591315 H3BNX3 289 aa9.89□□□□□ -0.83
VMP1-211ENST00000591315 H7C417 338 aa9.89□□□□□ -0.83
VMP1-211ENST00000591315 SGCEO43556 437 aa9.89□□□□□ -0.83
VMP1-211ENST00000591315 SYNGR3O43761 229 aa9.89□□□□□ -0.83
VMP1-211ENST00000591315 DOK2O60496 412 aa9.89□□□□□ -0.83
VMP1-211ENST00000591315 TMCC2O75069 709 aa9.89□□□□□ -0.83
VMP1-211ENST00000591315 DEAF1O75398 565 aaPredicted RBP9.89□□□□□ -0.83
VMP1-211ENST00000591315 LCKP06239 509 aa9.89□□□□□ -0.83
VMP1-211ENST00000591315 ADRA2AP08913 450 aa9.89□□□□□ -0.83
VMP1-211ENST00000591315 EPHA2P29317 976 aa9.89□□□□□ -0.83
VMP1-211ENST00000591315 GGT2P36268 569 aa9.89□□□□□ -0.83
VMP1-211ENST00000591315 MPV17P39210 176 aa9.89□□□□□ -0.83
VMP1-211ENST00000591315 HTR5AP47898 357 aa9.89□□□□□ -0.83
VMP1-211ENST00000591315 PCBD1P61457 104 aa9.89□□□□□ -0.83
VMP1-211ENST00000591315 SNRPD2P62316 118 aaKnown RBP9.89□□□□□ -0.83
VMP1-211ENST00000591315 GLO1Q04760 184 aa9.89□□□□□ -0.83
VMP1-211ENST00000591315 COX10Q12887 443 aa9.89□□□□□ -0.83
VMP1-211ENST00000591315 GK3PQ14409 553 aa9.89□□□□□ -0.83
VMP1-211ENST00000591315 RAB35Q15286 201 aa9.89□□□□□ -0.83
VMP1-211ENST00000591315 RSPO1Q2MKA7 263 aaPredicted RBP9.89□□□□□ -0.83
VMP1-211ENST00000591315 FAHD1Q6P587 224 aa9.89□□□□□ -0.83
VMP1-211ENST00000591315 TMEM154Q6P9G4 183 aa9.89□□□□□ -0.83
VMP1-211ENST00000591315 CFAP77Q6ZQR2 320 aa9.89□□□□□ -0.83
VMP1-211ENST00000591315 DNM1P46Q6ZS02 220 aa9.89□□□□□ -0.83
VMP1-211ENST00000591315 ZNF525Q8N782 197 aa9.89□□□□□ -0.83
VMP1-211ENST00000591315 PROKR2Q8NFJ6 384 aa9.89□□□□□ -0.83
VMP1-211ENST00000591315 OR5K1Q8NHB7 308 aa9.89□□□□□ -0.83
VMP1-211ENST00000591315 TEX47Q8TBZ9 253 aa9.89□□□□□ -0.83
VMP1-211ENST00000591315 DUS3LQ96G46 650 aaKnown RBP9.89□□□□□ -0.83
VMP1-211ENST00000591315 NMNAT2Q9BZQ4 307 aa9.89□□□□□ -0.83
VMP1-211ENST00000591315 RACGAP1Q9H0H5 632 aa9.89□□□□□ -0.83
VMP1-211ENST00000591315 TPK1Q9H3S4 243 aa9.89□□□□□ -0.83
VMP1-211ENST00000591315 WDR76Q9H967 626 aa9.89□□□□□ -0.83
VMP1-211ENST00000591315 POLR1DQ9Y2S0 133 aa9.89□□□□□ -0.83
VMP1-211ENST00000591315 SPEF1Q9Y4P9 236 aa9.89□□□□□ -0.83
VMP1-211ENST00000591315 FKBP7Q9Y680 259 aa9.89□□□□□ -0.83
VMP1-211ENST00000591315 PMF1-BGLAPU3KQ54 211 aa9.89□□□□□ -0.83
VMP1-211ENST00000591315 YLPM1P49750 1951 aaKnown RBP9.88□□□□□ -0.83
VMP1-211ENST00000591315 FN1P02751 2386 aaKnown RBP9.88□□□□□ -0.83
VMP1-211ENST00000591315 OR6C6A6NF89 314 aa9.88□□□□□ -0.83
VMP1-211ENST00000591315 SAC3D1A6NKF1 404 aa9.88□□□□□ -0.83
VMP1-211ENST00000591315 RNF223E7ERA6 249 aa9.88□□□□□ -0.83
VMP1-211ENST00000591315 LYNX1G3V0Z9 82 aa9.88□□□□□ -0.83
VMP1-211ENST00000591315 M0R129 80 aa9.88□□□□□ -0.83
VMP1-211ENST00000591315 SNAP29O95721 258 aa9.88□□□□□ -0.83
VMP1-211ENST00000591315 PTHP01270 115 aa9.88□□□□□ -0.83
VMP1-211ENST00000591315 HLA-DQA2P01906 255 aa9.88□□□□□ -0.83
VMP1-211ENST00000591315 LYNX1P0DP58 116 aa9.88□□□□□ -0.83
VMP1-211ENST00000591315 NAT2P11245 290 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms