RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 COMTD1Q86VU5 262 aa15.51■□□□□ 0.07
SMARCA4-215ENST00000590574 CDH26Q8IXH8 852 aa15.51■□□□□ 0.07
SMARCA4-215ENST00000590574 RNF141Q8WVD5 230 aa15.51■□□□□ 0.07
SMARCA4-215ENST00000590574 NUDCD2Q8WVJ2 157 aa15.51■□□□□ 0.07
SMARCA4-215ENST00000590574 MARC2Q969Z3 335 aa15.51■□□□□ 0.07
SMARCA4-215ENST00000590574 WDR89Q96FK6 387 aaPredicted RBP15.51■□□□□ 0.07
SMARCA4-215ENST00000590574 ULBP2Q9BZM5 246 aa15.51■□□□□ 0.07
SMARCA4-215ENST00000590574 MED29Q9NX70 200 aa15.51■□□□□ 0.07
SMARCA4-215ENST00000590574 KCNS2Q9ULS6 477 aa15.51■□□□□ 0.07
SMARCA4-215ENST00000590574 CIB4A0PJX0 185 aa15.5■□□□□ 0.07
SMARCA4-215ENST00000590574 C1orf196B1AJZ1 125 aa15.5■□□□□ 0.07
SMARCA4-215ENST00000590574 SSX5O60225 188 aa15.5■□□□□ 0.07
SMARCA4-215ENST00000590574 RAB6AP20340 208 aa15.5■□□□□ 0.07
SMARCA4-215ENST00000590574 CCR5P51681 352 aa15.5■□□□□ 0.07
SMARCA4-215ENST00000590574 CNN3Q15417 329 aaKnown RBP15.5■□□□□ 0.07
SMARCA4-215ENST00000590574 PLA1AQ53H76 456 aa15.5■□□□□ 0.07
SMARCA4-215ENST00000590574 ZNF784Q8NCA9 323 aaPredicted RBP15.5■□□□□ 0.07
SMARCA4-215ENST00000590574 CCDC74AQ96AQ1 378 aa15.5■□□□□ 0.07
SMARCA4-215ENST00000590574 ANKRD9Q96BM1 317 aaPredicted RBP15.5■□□□□ 0.07
SMARCA4-215ENST00000590574 NARFLQ9H6Q4 476 aa15.5■□□□□ 0.07
SMARCA4-215ENST00000590574 CHST11Q9NPF2 352 aa15.5■□□□□ 0.07
SMARCA4-215ENST00000590574 ZFP57Q9NU63 452 aa15.5■□□□□ 0.07
SMARCA4-215ENST00000590574 BCAT2O15382 392 aaPredicted RBP15.5■□□□□ 0.07
SMARCA4-215ENST00000590574 APOBEC1P41238 236 aaKnown RBP15.5■□□□□ 0.07
SMARCA4-215ENST00000590574 ZNF141Q15928 474 aa15.5■□□□□ 0.07
SMARCA4-215ENST00000590574 RTL6Q6ICC9 239 aa15.5■□□□□ 0.07
SMARCA4-215ENST00000590574 SCGB1C1Q8TD33 95 aa15.5■□□□□ 0.07
SMARCA4-215ENST00000590574 ABHD6Q9BV23 337 aa15.5■□□□□ 0.07
SMARCA4-215ENST00000590574 ZNF416Q9BWM5 594 aa15.5■□□□□ 0.07
SMARCA4-215ENST00000590574 K7EPK0 472 aa15.5■□□□□ 0.07
SMARCA4-215ENST00000590574 ZNF254O75437 659 aa15.5■□□□□ 0.07
SMARCA4-215ENST00000590574 CELA2BP08218 269 aaPredicted RBP15.5■□□□□ 0.07
SMARCA4-215ENST00000590574 GNB3P16520 340 aa15.5■□□□□ 0.07
SMARCA4-215ENST00000590574 MALLQ13021 153 aa15.5■□□□□ 0.07
SMARCA4-215ENST00000590574 PLA2G7Q13093 441 aa15.5■□□□□ 0.07
SMARCA4-215ENST00000590574 EXOSC6Q5RKV6 272 aaKnown RBP15.5■□□□□ 0.07
SMARCA4-215ENST00000590574 FAM71E2Q8N5Q1 922 aa15.5■□□□□ 0.07
SMARCA4-215ENST00000590574 SPACA5Q96QH8 159 aa15.5■□□□□ 0.07
SMARCA4-215ENST00000590574 TSPAN32Q96QS1 320 aa15.5■□□□□ 0.07
SMARCA4-215ENST00000590574 OR8B4Q96RC9 309 aa15.5■□□□□ 0.07
SMARCA4-215ENST00000590574 LEUTXA8MZ59 168 aa15.5■□□□□ 0.07
SMARCA4-215ENST00000590574 C4orf51C9J302 202 aa15.5■□□□□ 0.07
SMARCA4-215ENST00000590574 SLC17A2O00624 439 aa15.5■□□□□ 0.07
SMARCA4-215ENST00000590574 ZGLP1P0C6A0 271 aa15.5■□□□□ 0.07
SMARCA4-215ENST00000590574 PSG6Q00889 435 aa15.5■□□□□ 0.07
SMARCA4-215ENST00000590574 TMEM81Q6P7N7 255 aa15.5■□□□□ 0.07
SMARCA4-215ENST00000590574 SPRED2Q7Z698 418 aa15.5■□□□□ 0.07
SMARCA4-215ENST00000590574 PPP1R3BQ86XI6 285 aa15.5■□□□□ 0.07
SMARCA4-215ENST00000590574 TUBAL3A6NHL2 446 aa15.49■□□□□ 0.07
SMARCA4-215ENST00000590574 OR2F2O95006 317 aa15.49■□□□□ 0.07
SMARCA4-215ENST00000590574 IFNA5P01569 189 aa15.49■□□□□ 0.07
SMARCA4-215ENST00000590574 OR2F1Q13607 317 aa15.49■□□□□ 0.07
SMARCA4-215ENST00000590574 FAM74A1Q5RGS3 127 aa15.49■□□□□ 0.07
SMARCA4-215ENST00000590574 C9orf50Q5SZB4 431 aa15.49■□□□□ 0.07
SMARCA4-215ENST00000590574 ARTNQ5T4W7 220 aa15.49■□□□□ 0.07
SMARCA4-215ENST00000590574 LYPD8Q6UX82 237 aa15.49■□□□□ 0.07
SMARCA4-215ENST00000590574 ZNF695Q8IW36 515 aa15.49■□□□□ 0.07
SMARCA4-215ENST00000590574 MOGAT1Q96PD6 335 aa15.49■□□□□ 0.07
SMARCA4-215ENST00000590574 LRRC61Q9BV99 259 aa15.49■□□□□ 0.07
SMARCA4-215ENST00000590574 FAM86C1Q9NVL1 165 aa15.49■□□□□ 0.07
SMARCA4-215ENST00000590574 TOR1AO14656 332 aa15.49■□□□□ 0.07
SMARCA4-215ENST00000590574 GSTZ1O43708 216 aaPredicted RBP15.49■□□□□ 0.07
SMARCA4-215ENST00000590574 GABRG2P18507 467 aa15.49■□□□□ 0.07
SMARCA4-215ENST00000590574 NME2P22392 152 aa15.49■□□□□ 0.07
SMARCA4-215ENST00000590574 DUSP3P51452 185 aaPredicted RBP15.49■□□□□ 0.07
SMARCA4-215ENST00000590574 MTCP1P56278 107 aa15.49■□□□□ 0.07
SMARCA4-215ENST00000590574 DCDP81605 110 aaKnown RBP15.49■□□□□ 0.07
SMARCA4-215ENST00000590574 C1QTNF12Q5T7M4 302 aa15.49■□□□□ 0.07
SMARCA4-215ENST00000590574 NHLRC1Q6VVB1 395 aa15.49■□□□□ 0.07
SMARCA4-215ENST00000590574 PRSS27Q9BQR3 290 aa15.49■□□□□ 0.07
SMARCA4-215ENST00000590574 SULT4A1Q9BR01 284 aa15.49■□□□□ 0.07
SMARCA4-215ENST00000590574 FAM60AQ9NP50 221 aa15.49■□□□□ 0.07
SMARCA4-215ENST00000590574 ACSM4P0C7M7 580 aa15.49■□□□□ 0.07
SMARCA4-215ENST00000590574 P4HA3Q7Z4N8 544 aa15.49■□□□□ 0.07
SMARCA4-215ENST00000590574 CMSS1Q9BQ75 279 aaKnown RBP15.49■□□□□ 0.07
SMARCA4-215ENST00000590574 SLC25A32Q9H2D1 315 aa15.49■□□□□ 0.07
SMARCA4-215ENST00000590574 LDAHQ9H6V9 325 aa15.49■□□□□ 0.07
SMARCA4-215ENST00000590574 C1orf123Q9NWV4 160 aa15.49■□□□□ 0.07
SMARCA4-215ENST00000590574 CSAG2Q9Y5P2 127 aa15.49■□□□□ 0.07
SMARCA4-215ENST00000590574 TRPM6Q9BX84 2022 aa15.49■□□□□ 0.07
SMARCA4-215ENST00000590574 K7EQS6 105 aa15.49■□□□□ 0.07
SMARCA4-215ENST00000590574 ZNF117Q03924 483 aa15.49■□□□□ 0.07
SMARCA4-215ENST00000590574 GPR119Q8TDV5 335 aa15.49■□□□□ 0.07
SMARCA4-215ENST00000590574 METTL9Q9H1A3 318 aa15.49■□□□□ 0.07
SMARCA4-215ENST00000590574 SF3B6Q9Y3B4 125 aaKnown RBP15.49■□□□□ 0.07
SMARCA4-215ENST00000590574 TBXA2RP21731 343 aa15.48■□□□□ 0.07
SMARCA4-215ENST00000590574 IL32P24001 234 aa15.48■□□□□ 0.07
SMARCA4-215ENST00000590574 AKR1C2P52895 323 aa15.48■□□□□ 0.07
SMARCA4-215ENST00000590574 SNRPNP63162 240 aaKnown RBP15.48■□□□□ 0.07
SMARCA4-215ENST00000590574 AKR1C1Q04828 323 aa15.48■□□□□ 0.07
SMARCA4-215ENST00000590574 TMEM164Q5U3C3 297 aa15.48■□□□□ 0.07
SMARCA4-215ENST00000590574 OR1J2Q8NGS2 313 aa15.48■□□□□ 0.07
SMARCA4-215ENST00000590574 A0A1W2PPC4 97 aa15.48■□□□□ 0.07
SMARCA4-215ENST00000590574 ANKRD20A5PA0PJZ0 165 aa15.48■□□□□ 0.07
SMARCA4-215ENST00000590574 SULT1C2O00338 296 aa15.48■□□□□ 0.07
SMARCA4-215ENST00000590574 HOXC4P09017 264 aaPredicted RBP15.48■□□□□ 0.07
SMARCA4-215ENST00000590574 CX3CR1P49238 355 aa15.48■□□□□ 0.07
SMARCA4-215ENST00000590574 C17orf107Q6ZR85 190 aa15.48■□□□□ 0.07
SMARCA4-215ENST00000590574 NPEPL1Q8NDH3 523 aa15.48■□□□□ 0.07
SMARCA4-215ENST00000590574 LRP12Q9Y561 859 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms