RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 TMCC2O75069 709 aa16.61■□□□□ 0.25
DDX39A-214ENST00000590556 APLNRP35414 380 aa16.61■□□□□ 0.25
DDX39A-214ENST00000590556 ENTPD1P49961 510 aa16.61■□□□□ 0.25
DDX39A-214ENST00000590556 LCN1P1Q5VSP4 162 aa16.61■□□□□ 0.25
DDX39A-214ENST00000590556 NXNL2Q5VZ03 156 aa16.61■□□□□ 0.25
DDX39A-214ENST00000590556 SLC18B1Q6NT16 456 aa16.61■□□□□ 0.25
DDX39A-214ENST00000590556 CORO6Q6QEF8 472 aa16.61■□□□□ 0.25
DDX39A-214ENST00000590556 B3GLCTQ6Y288 498 aa16.61■□□□□ 0.25
DDX39A-214ENST00000590556 MEPCEQ7L2J0 689 aaKnown RBP16.61■□□□□ 0.25
DDX39A-214ENST00000590556 CDC20BQ86Y33 519 aa16.61■□□□□ 0.25
DDX39A-214ENST00000590556 ERI1Q8IV48 349 aaKnown RBP16.61■□□□□ 0.25
DDX39A-214ENST00000590556 DHRSXQ8N5I4 330 aa16.61■□□□□ 0.25
DDX39A-214ENST00000590556 CPEB3Q8NE35 698 aaKnown RBP16.61■□□□□ 0.25
DDX39A-214ENST00000590556 SLC30A7Q8NEW0 376 aa16.61■□□□□ 0.25
DDX39A-214ENST00000590556 GJC3Q8NFK1 279 aa16.61■□□□□ 0.25
DDX39A-214ENST00000590556 OR1J2Q8NGS2 313 aa16.61■□□□□ 0.25
DDX39A-214ENST00000590556 CYGBQ8WWM9 190 aa16.61■□□□□ 0.25
DDX39A-214ENST00000590556 UBE2FQ969M7 185 aa16.61■□□□□ 0.25
DDX39A-214ENST00000590556 INTS14Q96SY0 518 aa16.61■□□□□ 0.25
DDX39A-214ENST00000590556 TEAD3Q99594 435 aa16.61■□□□□ 0.25
DDX39A-214ENST00000590556 VCX3BQ9H321 246 aa16.61■□□□□ 0.25
DDX39A-214ENST00000590556 CYB5R1Q9UHQ9 305 aa16.61■□□□□ 0.25
DDX39A-214ENST00000590556 HRNRQ86YZ3 2850 aaPredicted RBP16.61■□□□□ 0.25
DDX39A-214ENST00000590556 NBPF19A0A087WUL8 3843 aa16.61■□□□□ 0.25
DDX39A-214ENST00000590556 CACNA1DQ01668 2161 aa16.6■□□□□ 0.25
DDX39A-214ENST00000590556 RTTNQ86VV8 2226 aa16.6■□□□□ 0.25
DDX39A-214ENST00000590556 A0A1W2PPR1 153 aa16.6■□□□□ 0.25
DDX39A-214ENST00000590556 CCDC182A6NF36 153 aa16.6■□□□□ 0.25
DDX39A-214ENST00000590556 SHISA9B4DS77 424 aa16.6■□□□□ 0.25
DDX39A-214ENST00000590556 ATP6V1G2-DDX39BF2Z307 99 aa16.6■□□□□ 0.25
DDX39A-214ENST00000590556 ZNF593O00488 134 aaPredicted RBP16.6■□□□□ 0.25
DDX39A-214ENST00000590556 RER1O15258 196 aa16.6■□□□□ 0.25
DDX39A-214ENST00000590556 SPARCP09486 303 aa16.6■□□□□ 0.25
DDX39A-214ENST00000590556 STOMP27105 288 aa16.6■□□□□ 0.25
DDX39A-214ENST00000590556 APEX1P27695 318 aaKnown RBP16.6■□□□□ 0.25
DDX39A-214ENST00000590556 HIST1H3AP68431 136 aa16.6■□□□□ 0.25
DDX39A-214ENST00000590556 KEAP1Q14145 624 aa16.6■□□□□ 0.25
DDX39A-214ENST00000590556 TEX30Q5JUR7 227 aa16.6■□□□□ 0.25
DDX39A-214ENST00000590556 HIST2H3PS2Q5TEC6 136 aa16.6■□□□□ 0.25
DDX39A-214ENST00000590556 TTC23Q5W5X9 447 aa16.6■□□□□ 0.25
DDX39A-214ENST00000590556 HIST2H3AQ71DI3 136 aa16.6■□□□□ 0.25
DDX39A-214ENST00000590556 GID4Q8IVV7 300 aa16.6■□□□□ 0.25
DDX39A-214ENST00000590556 KBTBD8Q8NFY9 601 aa16.6■□□□□ 0.25
DDX39A-214ENST00000590556 MARCH7Q9H992 704 aa16.6■□□□□ 0.25
DDX39A-214ENST00000590556 PLEK2Q9NYT0 353 aa16.6■□□□□ 0.25
DDX39A-214ENST00000590556 GDF2Q9UK05 429 aaPredicted RBP16.6■□□□□ 0.25
DDX39A-214ENST00000590556 POU2F3Q9UKI9 436 aa16.6■□□□□ 0.25
DDX39A-214ENST00000590556 ATP23Q9Y6H3 246 aa16.6■□□□□ 0.25
DDX39A-214ENST00000590556 DOK2O60496 412 aa16.59■□□□□ 0.25
DDX39A-214ENST00000590556 CALCRP30988 508 aa16.59■□□□□ 0.25
DDX39A-214ENST00000590556 RPS27P42677 84 aaKnown RBP16.59■□□□□ 0.25
DDX39A-214ENST00000590556 GDI2P50395 445 aaKnown RBP16.59■□□□□ 0.25
DDX39A-214ENST00000590556 SNRPGP62308 76 aaKnown RBP16.59■□□□□ 0.25
DDX39A-214ENST00000590556 TBC1D28Q2M2D7 210 aa16.59■□□□□ 0.25
DDX39A-214ENST00000590556 CCDC92Q53HC0 331 aaPredicted RBP16.59■□□□□ 0.25
DDX39A-214ENST00000590556 TMEM154Q6P9G4 183 aa16.59■□□□□ 0.25
DDX39A-214ENST00000590556 VASH1Q7L8A9 365 aaPredicted RBP16.59■□□□□ 0.25
DDX39A-214ENST00000590556 TIGD4Q8IY51 512 aa16.59■□□□□ 0.25
DDX39A-214ENST00000590556 OR6N2Q8NGY6 317 aa16.59■□□□□ 0.25
DDX39A-214ENST00000590556 AKAP1Q92667 903 aaKnown RBP eCLIP16.59■□□□□ 0.25
DDX39A-214ENST00000590556 ZNF582Q96NG8 517 aaPredicted RBP16.59■□□□□ 0.25
DDX39A-214ENST00000590556 APOL4Q9BPW4 351 aa16.59■□□□□ 0.25
DDX39A-214ENST00000590556 CDH20Q9HBT6 801 aa16.59■□□□□ 0.25
DDX39A-214ENST00000590556 DNAJC27Q9NZQ0 273 aa16.59■□□□□ 0.25
DDX39A-214ENST00000590556 PLCE1Q9P212 2302 aa16.58■□□□□ 0.25
DDX39A-214ENST00000590556 SLC22A31A6NKX4 558 aa16.58■□□□□ 0.24
DDX39A-214ENST00000590556 MPZL2O60487 215 aa16.58■□□□□ 0.24
DDX39A-214ENST00000590556 SELENOFO60613 162 aa16.58■□□□□ 0.24
DDX39A-214ENST00000590556 COX5BP10606 129 aa16.58■□□□□ 0.24
DDX39A-214ENST00000590556 CCL2P13500 99 aa16.58■□□□□ 0.24
DDX39A-214ENST00000590556 ZNF35P13682 527 aa16.58■□□□□ 0.24
DDX39A-214ENST00000590556 HTR5AP47898 357 aa16.58■□□□□ 0.24
DDX39A-214ENST00000590556 CDH11P55287 796 aa16.58■□□□□ 0.24
DDX39A-214ENST00000590556 KRTAP10-9P60411 292 aa16.58■□□□□ 0.24
DDX39A-214ENST00000590556 ADARB1P78563 741 aaKnown RBP16.58■□□□□ 0.24
DDX39A-214ENST00000590556 RAB35Q15286 201 aa16.58■□□□□ 0.24
DDX39A-214ENST00000590556 PCK2Q16822 640 aa16.58■□□□□ 0.24
DDX39A-214ENST00000590556 ZNF672Q499Z4 452 aaPredicted RBP16.58■□□□□ 0.24
DDX39A-214ENST00000590556 ELFN2Q5R3F8 820 aa16.58■□□□□ 0.24
DDX39A-214ENST00000590556 CFAP77Q6ZQR2 320 aa16.58■□□□□ 0.24
DDX39A-214ENST00000590556 OR4F15Q8NGB8 312 aa16.58■□□□□ 0.24
DDX39A-214ENST00000590556 OR1F12Q8NHA8 337 aa16.58■□□□□ 0.24
DDX39A-214ENST00000590556 LILRB1Q8NHL6 650 aaPredicted RBP16.58■□□□□ 0.24
DDX39A-214ENST00000590556 NEUROG1Q92886 237 aa16.58■□□□□ 0.24
DDX39A-214ENST00000590556 RFKQ969G6 155 aa16.58■□□□□ 0.24
DDX39A-214ENST00000590556 ADI1Q9BV57 179 aa16.58■□□□□ 0.24
DDX39A-214ENST00000590556 PLEKHF2Q9H8W4 249 aa16.58■□□□□ 0.24
DDX39A-214ENST00000590556 UBTD1Q9HAC8 227 aa16.58■□□□□ 0.24
DDX39A-214ENST00000590556 LOC100509620A0A075B734 347 aa16.57■□□□□ 0.24
DDX39A-214ENST00000590556 C5orf49A4QMS7 147 aa16.57■□□□□ 0.24
DDX39A-214ENST00000590556 H0YJX3 145 aa16.57■□□□□ 0.24
DDX39A-214ENST00000590556 SYNGR3O43761 229 aa16.57■□□□□ 0.24
DDX39A-214ENST00000590556 PSKH1P11801 424 aa16.57■□□□□ 0.24
DDX39A-214ENST00000590556 CCNOP22674 350 aa16.57■□□□□ 0.24
DDX39A-214ENST00000590556 NAA10P41227 235 aaPredicted RBP16.57■□□□□ 0.24
DDX39A-214ENST00000590556 GALK2Q01415 458 aa16.57■□□□□ 0.24
DDX39A-214ENST00000590556 HGFACQ04756 655 aa16.57■□□□□ 0.24
DDX39A-214ENST00000590556 OCLNQ16625 522 aa16.57■□□□□ 0.24
DDX39A-214ENST00000590556 SLC25A30Q5SVS4 291 aa16.57■□□□□ 0.24
DDX39A-214ENST00000590556 MEDAGQ5VYS4 303 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms