RNA–Protein interactions for RNA: ENST00000590407.1

PDE4A-207, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best)

Gene PDE4A, Length 1,770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-207ENST00000590407 RAP1BP61224 184 aa11.11□□□□□ -0.63
PDE4A-207ENST00000590407 RAP1AP62834 184 aa11.11□□□□□ -0.63
PDE4A-207ENST00000590407 ADAM8P78325 824 aa11.11□□□□□ -0.63
PDE4A-207ENST00000590407 GLO1Q04760 184 aa11.11□□□□□ -0.63
PDE4A-207ENST00000590407 ZP4Q12836 540 aa11.11□□□□□ -0.63
PDE4A-207ENST00000590407 EIF2B1Q14232 305 aaKnown RBP11.11□□□□□ -0.63
PDE4A-207ENST00000590407 EBPQ15125 230 aaKnown RBP11.11□□□□□ -0.63
PDE4A-207ENST00000590407 NR0B2Q15466 257 aa11.11□□□□□ -0.63
PDE4A-207ENST00000590407 ODF4Q2M2E3 257 aa11.11□□□□□ -0.63
PDE4A-207ENST00000590407 TMEM244Q5VVB8 128 aa11.11□□□□□ -0.63
PDE4A-207ENST00000590407 C11orf87Q6NUJ2 197 aa11.11□□□□□ -0.63
PDE4A-207ENST00000590407 UQCC3Q6UW78 93 aa11.11□□□□□ -0.63
PDE4A-207ENST00000590407 ACOT7LQ6ZUV0 252 aa11.11□□□□□ -0.63
PDE4A-207ENST00000590407 SLC35D2Q76EJ3 337 aa11.11□□□□□ -0.63
PDE4A-207ENST00000590407 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.11□□□□□ -0.63
PDE4A-207ENST00000590407 CPAMD8Q8IZJ3 1885 aa11.11□□□□□ -0.63
PDE4A-207ENST00000590407 BPIFB2Q8N4F0 458 aa11.11□□□□□ -0.63
PDE4A-207ENST00000590407 ZNF321PQ8N8H1 164 aa11.11□□□□□ -0.63
PDE4A-207ENST00000590407 OR8S1Q8NH09 359 aa11.11□□□□□ -0.63
PDE4A-207ENST00000590407 SLC25A44Q96H78 314 aaPredicted RBP11.11□□□□□ -0.63
PDE4A-207ENST00000590407 SLC38A3Q99624 504 aa11.11□□□□□ -0.63
PDE4A-207ENST00000590407 LRRC61Q9BV99 259 aa11.11□□□□□ -0.63
PDE4A-207ENST00000590407 NUDT9Q9BW91 350 aa11.11□□□□□ -0.63
PDE4A-207ENST00000590407 RTN4RQ9BZR6 473 aa11.11□□□□□ -0.63
PDE4A-207ENST00000590407 TINAGL1Q9GZM7 467 aaPredicted RBP11.11□□□□□ -0.63
PDE4A-207ENST00000590407 RAB33BQ9H082 229 aa11.11□□□□□ -0.63
PDE4A-207ENST00000590407 KCNK15Q9H427 330 aa11.11□□□□□ -0.63
PDE4A-207ENST00000590407 CERS4Q9HA82 394 aa11.11□□□□□ -0.63
PDE4A-207ENST00000590407 G6PC2Q9NQR9 355 aa11.11□□□□□ -0.63
PDE4A-207ENST00000590407 FBLN5Q9UBX5 448 aa11.11□□□□□ -0.63
PDE4A-207ENST00000590407 RAB22AQ9UL26 194 aa11.11□□□□□ -0.63
PDE4A-207ENST00000590407 MRPS18BQ9Y676 258 aaKnown RBP11.11□□□□□ -0.63
PDE4A-207ENST00000590407 TMED7-TICAM2A0A0A6YYA0 188 aa11.11□□□□□ -0.63
PDE4A-207ENST00000590407 KANTRA0A1W2PQU2 76 aa11.11□□□□□ -0.63
PDE4A-207ENST00000590407 CPED1A4D0V7 1026 aa11.11□□□□□ -0.63
PDE4A-207ENST00000590407 MEIS3P1A6NDR6 274 aa11.11□□□□□ -0.63
PDE4A-207ENST00000590407 LGALS8O00214 317 aa11.11□□□□□ -0.63
PDE4A-207ENST00000590407 OR2T1O43869 369 aa11.11□□□□□ -0.63
PDE4A-207ENST00000590407 TSPAN9O75954 239 aa11.11□□□□□ -0.63
PDE4A-207ENST00000590407 SPDEFO95238 335 aa11.11□□□□□ -0.63
PDE4A-207ENST00000590407 FBXO45P0C2W1 286 aa11.11□□□□□ -0.63
PDE4A-207ENST00000590407 IL32P24001 234 aa11.11□□□□□ -0.63
PDE4A-207ENST00000590407 HSD11B1P28845 292 aa11.11□□□□□ -0.63
PDE4A-207ENST00000590407 IL12BP29460 328 aa11.11□□□□□ -0.63
PDE4A-207ENST00000590407 SLC26A5P58743 744 aa11.11□□□□□ -0.63
PDE4A-207ENST00000590407 TDGQ13569 410 aa11.11□□□□□ -0.63
PDE4A-207ENST00000590407 ELOCQ15369 112 aa11.11□□□□□ -0.63
PDE4A-207ENST00000590407 ZNF542PQ5EBM4 170 aa11.11□□□□□ -0.63
PDE4A-207ENST00000590407 TMEM31Q5JXX7 168 aa11.11□□□□□ -0.63
PDE4A-207ENST00000590407 C1orf140Q5VVS0 124 aa11.11□□□□□ -0.63
PDE4A-207ENST00000590407 C1QL3Q5VWW1 255 aa11.11□□□□□ -0.63
PDE4A-207ENST00000590407 PAPD4Q6PIY7 484 aaKnown RBP11.11□□□□□ -0.63
PDE4A-207ENST00000590407 DNM1P34Q6PK57 102 aa11.11□□□□□ -0.63
PDE4A-207ENST00000590407 ZNF627Q7L945 461 aa11.11□□□□□ -0.63
PDE4A-207ENST00000590407 GRINAQ7Z429 371 aa11.11□□□□□ -0.63
PDE4A-207ENST00000590407 LYG2Q86SG7 212 aa11.11□□□□□ -0.63
PDE4A-207ENST00000590407 OR1J2Q8NGS2 313 aa11.11□□□□□ -0.63
PDE4A-207ENST00000590407 PDE7BQ9NP56 450 aa11.11□□□□□ -0.63
PDE4A-207ENST00000590407 ZC4H2Q9NQZ6 224 aa11.11□□□□□ -0.63
PDE4A-207ENST00000590407 PNO1Q9NRX1 252 aaKnown RBP11.11□□□□□ -0.63
PDE4A-207ENST00000590407 MSRAQ9UJ68 235 aa11.11□□□□□ -0.63
PDE4A-207ENST00000590407 FBXL2Q9UKC9 423 aa11.11□□□□□ -0.63
PDE4A-207ENST00000590407 TMED7Q9Y3B3 224 aa11.11□□□□□ -0.63
PDE4A-207ENST00000590407 PIAS3Q9Y6X2 628 aa11.11□□□□□ -0.63
PDE4A-207ENST00000590407 LAMA2P24043 3122 aaKnown RBP11.1□□□□□ -0.63
PDE4A-207ENST00000590407 LOC107986453A0A1B0GWG9 222 aa11.1□□□□□ -0.63
PDE4A-207ENST00000590407 TCRBV16S1A1N1A0A5B0 115 aa11.1□□□□□ -0.63
PDE4A-207ENST00000590407 METTL21EPA6NDL7 271 aa11.1□□□□□ -0.63
PDE4A-207ENST00000590407 OR6C76A6NM76 312 aa11.1□□□□□ -0.63
PDE4A-207ENST00000590407 C11orf98E9PRG8 122 aa11.1□□□□□ -0.63
PDE4A-207ENST00000590407 M0QYG6 137 aa11.1□□□□□ -0.63
PDE4A-207ENST00000590407 EIF1AYO14602 144 aaKnown RBP11.1□□□□□ -0.63
PDE4A-207ENST00000590407 ABCD4O14678 606 aa11.1□□□□□ -0.63
PDE4A-207ENST00000590407 EIF1AXP47813 144 aaKnown RBP11.1□□□□□ -0.63
PDE4A-207ENST00000590407 DNASE1L1P49184 302 aa11.1□□□□□ -0.63
PDE4A-207ENST00000590407 C1orf61Q13536 156 aa11.1□□□□□ -0.63
PDE4A-207ENST00000590407 KCNAB1Q14722 419 aa11.1□□□□□ -0.63
PDE4A-207ENST00000590407 ZNF260Q3ZCT1 412 aa11.1□□□□□ -0.63
PDE4A-207ENST00000590407 CHRDL2Q6WN34 429 aa11.1□□□□□ -0.63
PDE4A-207ENST00000590407 C17orf82Q86X59 251 aaPredicted RBP11.1□□□□□ -0.63
PDE4A-207ENST00000590407 ZNF584Q8IVC4 421 aa11.1□□□□□ -0.63
PDE4A-207ENST00000590407 CCDC36Q8IYA8 594 aa11.1□□□□□ -0.63
PDE4A-207ENST00000590407 ZNF441Q8N8Z8 693 aa11.1□□□□□ -0.63
PDE4A-207ENST00000590407 SLC26A10Q8NG04 563 aa11.1□□□□□ -0.63
PDE4A-207ENST00000590407 OR5T2Q8NGG2 359 aa11.1□□□□□ -0.63
PDE4A-207ENST00000590407 OR13C3Q8NGS6 347 aa11.1□□□□□ -0.63
PDE4A-207ENST00000590407 OR10K1Q8NGX5 313 aa11.1□□□□□ -0.63
PDE4A-207ENST00000590407 MITD1Q8WV92 249 aa11.1□□□□□ -0.63
PDE4A-207ENST00000590407 ZBTB8AQ96BR9 441 aa11.1□□□□□ -0.63
PDE4A-207ENST00000590407 MRPL38Q96DV4 380 aaKnown RBP11.1□□□□□ -0.63
PDE4A-207ENST00000590407 SLC6A7Q99884 636 aa11.1□□□□□ -0.63
PDE4A-207ENST00000590407 TMEM106CQ9BVX2 250 aa11.1□□□□□ -0.63
PDE4A-207ENST00000590407 OR8D2Q9GZM6 311 aa11.1□□□□□ -0.63
PDE4A-207ENST00000590407 COMMD9Q9P000 198 aa11.1□□□□□ -0.63
PDE4A-207ENST00000590407 GDF2Q9UK05 429 aaPredicted RBP11.1□□□□□ -0.63
PDE4A-207ENST00000590407 OR52A1Q9UKL2 312 aa11.1□□□□□ -0.63
PDE4A-207ENST00000590407 KLK13Q9UKR3 277 aa11.1□□□□□ -0.63
PDE4A-207ENST00000590407 RNF222A6NCQ9 220 aa11.09□□□□□ -0.63
PDE4A-207ENST00000590407 FTCDNL1E5RQL4 147 aa11.09□□□□□ -0.63
PDE4A-207ENST00000590407 H3BMH7 237 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms