RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 LHFPL6Q9Y693 200 aa11.87□□□□□ -0.51
VMP1-210ENST00000589823 RER1O15258 196 aa11.86□□□□□ -0.51
VMP1-210ENST00000589823 SGCEO43556 437 aa11.86□□□□□ -0.51
VMP1-210ENST00000589823 DOK2O60496 412 aa11.86□□□□□ -0.51
VMP1-210ENST00000589823 WBP4O75554 376 aaKnown RBP11.86□□□□□ -0.51
VMP1-210ENST00000589823 IGKV3-15P01624 115 aa11.86□□□□□ -0.51
VMP1-210ENST00000589823 SBK2P0C263 348 aa11.86□□□□□ -0.51
VMP1-210ENST00000589823 IDH3GP51553 393 aaPredicted RBP11.86□□□□□ -0.51
VMP1-210ENST00000589823 PSG4Q00888 419 aa11.86□□□□□ -0.51
VMP1-210ENST00000589823 ZNF91Q05481 1191 aa11.86□□□□□ -0.51
VMP1-210ENST00000589823 CDK5R2Q13319 367 aa11.86□□□□□ -0.51
VMP1-210ENST00000589823 EIF2B1Q14232 305 aaKnown RBP11.86□□□□□ -0.51
VMP1-210ENST00000589823 RAB39AQ14964 217 aa11.86□□□□□ -0.51
VMP1-210ENST00000589823 PCK2Q16822 640 aa11.86□□□□□ -0.51
VMP1-210ENST00000589823 BEX5Q5H9J7 111 aa11.86□□□□□ -0.51
VMP1-210ENST00000589823 KRT80Q6KB66 452 aa11.86□□□□□ -0.51
VMP1-210ENST00000589823 TMEM108Q6UXF1 575 aa11.86□□□□□ -0.51
VMP1-210ENST00000589823 DPY19L4Q7Z388 723 aa11.86□□□□□ -0.51
VMP1-210ENST00000589823 DCXRQ7Z4W1 244 aa11.86□□□□□ -0.51
VMP1-210ENST00000589823 ZNF454Q8N9F8 522 aa11.86□□□□□ -0.51
VMP1-210ENST00000589823 ACBD4Q8NC06 268 aa11.86□□□□□ -0.51
VMP1-210ENST00000589823 RNFT2Q96EX2 444 aa11.86□□□□□ -0.51
VMP1-210ENST00000589823 CNBD2Q96M20 576 aa11.86□□□□□ -0.51
VMP1-210ENST00000589823 KCNS3Q9BQ31 491 aa11.86□□□□□ -0.51
VMP1-210ENST00000589823 WNT5BQ9H1J7 359 aa11.86□□□□□ -0.51
VMP1-210ENST00000589823 ESRP2Q9H6T0 727 aaKnown RBP11.86□□□□□ -0.51
VMP1-210ENST00000589823 NPAP1Q9NZP6 1156 aa11.86□□□□□ -0.51
VMP1-210ENST00000589823 CRNNQ9UBG3 495 aaPredicted RBP11.86□□□□□ -0.51
VMP1-210ENST00000589823 PLEKHB1Q9UF11 243 aaPredicted RBP11.86□□□□□ -0.51
VMP1-210ENST00000589823 KCNN3Q9UGI6 736 aa11.86□□□□□ -0.51
VMP1-210ENST00000589823 LAMP5Q9UJQ1 280 aa11.86□□□□□ -0.51
VMP1-210ENST00000589823 GDF2Q9UK05 429 aaPredicted RBP11.86□□□□□ -0.51
VMP1-210ENST00000589823 TMEM14AQ9Y6G1 99 aa11.86□□□□□ -0.51
VMP1-210ENST00000589823 GCN1Q92616 2671 aaKnown RBP11.85□□□□□ -0.51
VMP1-210ENST00000589823 IGHV1-18A0A0C4DH31 117 aa11.85□□□□□ -0.51
VMP1-210ENST00000589823 ZNF670-ZNF695F2Z2N8 137 aa11.85□□□□□ -0.51
VMP1-210ENST00000589823 IGLV1-44P01699 117 aa11.85□□□□□ -0.51
VMP1-210ENST00000589823 SERPINA5P05154 406 aa11.85□□□□□ -0.51
VMP1-210ENST00000589823 LYNP07948 512 aa11.85□□□□□ -0.51
VMP1-210ENST00000589823 DBTP11182 482 aaKnown RBP11.85□□□□□ -0.51
VMP1-210ENST00000589823 ZNF14P17017 642 aaPredicted RBP11.85□□□□□ -0.51
VMP1-210ENST00000589823 PTAFRP25105 342 aa11.85□□□□□ -0.51
VMP1-210ENST00000589823 APLNRP35414 380 aa11.85□□□□□ -0.51
VMP1-210ENST00000589823 HTR5AP47898 357 aa11.85□□□□□ -0.51
VMP1-210ENST00000589823 NR1H2P55055 460 aa11.85□□□□□ -0.51
VMP1-210ENST00000589823 RAB35Q15286 201 aa11.85□□□□□ -0.51
VMP1-210ENST00000589823 SMN1Q16637 294 aaKnown RBP11.85□□□□□ -0.51
VMP1-210ENST00000589823 KLHL22Q53GT1 634 aa11.85□□□□□ -0.51
VMP1-210ENST00000589823 ZNF774Q6NX45 483 aa11.85□□□□□ -0.51
VMP1-210ENST00000589823 TMEM154Q6P9G4 183 aa11.85□□□□□ -0.51
VMP1-210ENST00000589823 SEZ6L2Q6UXD5 910 aa11.85□□□□□ -0.51
VMP1-210ENST00000589823 CDC20BQ86Y33 519 aa11.85□□□□□ -0.51
VMP1-210ENST00000589823 SLC35F2Q8IXU6 374 aa11.85□□□□□ -0.51
VMP1-210ENST00000589823 IL17RDQ8NFM7 739 aa11.85□□□□□ -0.51
VMP1-210ENST00000589823 OR1J2Q8NGS2 313 aa11.85□□□□□ -0.51
VMP1-210ENST00000589823 AKR7LQ8NHP1 331 aa11.85□□□□□ -0.51
VMP1-210ENST00000589823 OTOSQ8NHW6 89 aa11.85□□□□□ -0.51
VMP1-210ENST00000589823 FBLIM1Q8WUP2 373 aa11.85□□□□□ -0.51
VMP1-210ENST00000589823 THEM6Q8WUY1 208 aa11.85□□□□□ -0.51
VMP1-210ENST00000589823 MNTQ99583 582 aa11.85□□□□□ -0.51
VMP1-210ENST00000589823 HDHD2Q9H0R4 259 aa11.85□□□□□ -0.51
VMP1-210ENST00000589823 ADGRL4Q9HBW9 690 aa11.85□□□□□ -0.51
VMP1-210ENST00000589823 AMBNQ9NP70 447 aa11.85□□□□□ -0.51
VMP1-210ENST00000589823 PCDHGB1Q9Y5G3 927 aa11.85□□□□□ -0.51
VMP1-210ENST00000589823 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.84□□□□□ -0.51
VMP1-210ENST00000589823 IRGMA1A4Y4 181 aa11.84□□□□□ -0.51
VMP1-210ENST00000589823 PHYHO14832 338 aa11.84□□□□□ -0.51
VMP1-210ENST00000589823 APOL3O95236 402 aa11.84□□□□□ -0.51
VMP1-210ENST00000589823 GOSR1O95249 250 aa11.84□□□□□ -0.51
VMP1-210ENST00000589823 CRYAAP02489 173 aa11.84□□□□□ -0.51
VMP1-210ENST00000589823 CECR9P0C854 216 aa11.84□□□□□ -0.51
VMP1-210ENST00000589823 COX5BP10606 129 aa11.84□□□□□ -0.51
VMP1-210ENST00000589823 PSKH1P11801 424 aa11.84□□□□□ -0.51
VMP1-210ENST00000589823 CD40P25942 277 aa11.84□□□□□ -0.51
VMP1-210ENST00000589823 STOMP27105 288 aa11.84□□□□□ -0.51
VMP1-210ENST00000589823 GDI2P50395 445 aaKnown RBP11.84□□□□□ -0.51
VMP1-210ENST00000589823 CSNK2BP67870 215 aa11.84□□□□□ -0.51
VMP1-210ENST00000589823 HIST1H3AP68431 136 aa11.84□□□□□ -0.51
VMP1-210ENST00000589823 TBC1D28Q2M2D7 210 aa11.84□□□□□ -0.51
VMP1-210ENST00000589823 CCDC92Q53HC0 331 aaPredicted RBP11.84□□□□□ -0.51
VMP1-210ENST00000589823 ELFN2Q5R3F8 820 aa11.84□□□□□ -0.51
VMP1-210ENST00000589823 HIST2H3PS2Q5TEC6 136 aa11.84□□□□□ -0.51
VMP1-210ENST00000589823 CFAP77Q6ZQR2 320 aa11.84□□□□□ -0.51
VMP1-210ENST00000589823 HIST2H3AQ71DI3 136 aa11.84□□□□□ -0.51
VMP1-210ENST00000589823 VASH1Q7L8A9 365 aaPredicted RBP11.84□□□□□ -0.51
VMP1-210ENST00000589823 SLC30A7Q8NEW0 376 aa11.84□□□□□ -0.51
VMP1-210ENST00000589823 BPIFB6Q8NFQ5 453 aa11.84□□□□□ -0.51
VMP1-210ENST00000589823 LGALS12Q96DT0 336 aa11.84□□□□□ -0.51
VMP1-210ENST00000589823 SLAMF6Q96DU3 332 aa11.84□□□□□ -0.51
VMP1-210ENST00000589823 PIK3IP1Q96FE7 263 aa11.84□□□□□ -0.51
VMP1-210ENST00000589823 PLPPR2Q96GM1 343 aa11.84□□□□□ -0.51
VMP1-210ENST00000589823 MS4A3Q96HJ5 214 aa11.84□□□□□ -0.51
VMP1-210ENST00000589823 ZNF75AQ96N20 296 aa11.84□□□□□ -0.51
VMP1-210ENST00000589823 COQ7Q99807 217 aa11.84□□□□□ -0.51
VMP1-210ENST00000589823 CENPMQ9NSP4 180 aa11.84□□□□□ -0.51
VMP1-210ENST00000589823 ATPIF1Q9UII2 106 aa11.84□□□□□ -0.51
VMP1-210ENST00000589823 FASNP49327 2511 aaKnown RBP11.83□□□□□ -0.52
VMP1-210ENST00000589823 DPRXA6NFQ7 191 aa11.83□□□□□ -0.52
VMP1-210ENST00000589823 ZNF878C9JN71 531 aa11.83□□□□□ -0.52
VMP1-210ENST00000589823 DENRO43583 198 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms