RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 OR4C15Q8NGM1 316 aa8.97□□□□□ -0.97
SDF2-208ENST00000589788 OR5K1Q8NHB7 308 aa8.97□□□□□ -0.97
SDF2-208ENST00000589788 RASD2Q96D21 266 aa8.97□□□□□ -0.97
SDF2-208ENST00000589788 ZNF75AQ96N20 296 aa8.97□□□□□ -0.97
SDF2-208ENST00000589788 GPX7Q96SL4 187 aaPredicted RBP8.97□□□□□ -0.97
SDF2-208ENST00000589788 GPA33Q99795 319 aa8.97□□□□□ -0.97
SDF2-208ENST00000589788 C9orf16Q9BUW7 83 aa8.97□□□□□ -0.97
SDF2-208ENST00000589788 C1orf198Q9H425 327 aa8.97□□□□□ -0.97
SDF2-208ENST00000589788 NRIP3Q9NQ35 241 aa8.97□□□□□ -0.97
SDF2-208ENST00000589788 OAZ3Q9UMX2 235 aa8.97□□□□□ -0.97
SDF2-208ENST00000589788 UGT2A1Q9Y4X1 527 aa8.97□□□□□ -0.97
SDF2-208ENST00000589788 IER3IP1Q9Y5U9 82 aa8.97□□□□□ -0.97
SDF2-208ENST00000589788 U3KQV3 271 aa8.97□□□□□ -0.97
SDF2-208ENST00000589788 CSMD1Q96PZ7 3565 aa8.96□□□□□ -0.98
SDF2-208ENST00000589788 TEP1Q99973 2627 aaKnown RBP8.96□□□□□ -0.98
SDF2-208ENST00000589788 TRBV23-1A0A0A0MS06 115 aa8.96□□□□□ -0.98
SDF2-208ENST00000589788 IGKV1D-43A0A0B4J1Z2 117 aa8.96□□□□□ -0.98
SDF2-208ENST00000589788 SLC22A23A1A5C7 686 aa8.96□□□□□ -0.98
SDF2-208ENST00000589788 PRSS37A4D1T9 235 aa8.96□□□□□ -0.98
SDF2-208ENST00000589788 ARRDC5A6NEK1 342 aa8.96□□□□□ -0.98
SDF2-208ENST00000589788 SAC3D1A6NKF1 404 aa8.96□□□□□ -0.98
SDF2-208ENST00000589788 G3V2T6 193 aa8.96□□□□□ -0.98
SDF2-208ENST00000589788 PPP1R3DO95685 299 aa8.96□□□□□ -0.98
SDF2-208ENST00000589788 IGHV4-39P01824 125 aa8.96□□□□□ -0.98
SDF2-208ENST00000589788 OR4A8P0C604 315 aa8.96□□□□□ -0.98
SDF2-208ENST00000589788 NR4A1P22736 598 aa8.96□□□□□ -0.98
SDF2-208ENST00000589788 PEX2P28328 305 aa8.96□□□□□ -0.98
SDF2-208ENST00000589788 THBS4P35443 961 aa8.96□□□□□ -0.98
SDF2-208ENST00000589788 FXYD6P3P58550 94 aa8.96□□□□□ -0.98
SDF2-208ENST00000589788 RPS23P62266 143 aaKnown RBP8.96□□□□□ -0.98
SDF2-208ENST00000589788 HGFACQ04756 655 aa8.96□□□□□ -0.98
SDF2-208ENST00000589788 TSPAN31Q12999 210 aa8.96□□□□□ -0.98
SDF2-208ENST00000589788 ADIPOQQ15848 244 aa8.96□□□□□ -0.98
SDF2-208ENST00000589788 RFX4Q33E94 735 aa8.96□□□□□ -0.98
SDF2-208ENST00000589788 C1orf94Q6P1W5 598 aa8.96□□□□□ -0.98
SDF2-208ENST00000589788 PGBD2Q6P3X8 592 aa8.96□□□□□ -0.98
SDF2-208ENST00000589788 FAM122BQ7Z309 247 aa8.96□□□□□ -0.98
SDF2-208ENST00000589788 TMEM179BQ7Z7N9 219 aa8.96□□□□□ -0.98
SDF2-208ENST00000589788 HIPK1Q86Z02 1210 aa8.96□□□□□ -0.98
SDF2-208ENST00000589788 ZDHHC13Q8IUH4 622 aa8.96□□□□□ -0.98
SDF2-208ENST00000589788 SLC30A7Q8NEW0 376 aa8.96□□□□□ -0.98
SDF2-208ENST00000589788 OR1J2Q8NGS2 313 aa8.96□□□□□ -0.98
SDF2-208ENST00000589788 FGFBP3Q8TAT2 258 aa8.96□□□□□ -0.98
SDF2-208ENST00000589788 NRG4Q8WWG1 115 aa8.96□□□□□ -0.98
SDF2-208ENST00000589788 NABP1Q96AH0 204 aa8.96□□□□□ -0.98
SDF2-208ENST00000589788 EME1Q96AY2 570 aa8.96□□□□□ -0.98
SDF2-208ENST00000589788 C1orf159Q96HA4 380 aa8.96□□□□□ -0.98
SDF2-208ENST00000589788 SAMD8Q96LT4 415 aa8.96□□□□□ -0.98
SDF2-208ENST00000589788 ERMAPQ96PL5 475 aaPredicted RBP8.96□□□□□ -0.98
SDF2-208ENST00000589788 CIB1Q99828 191 aa8.96□□□□□ -0.98
SDF2-208ENST00000589788 IFT27Q9BW83 186 aa8.96□□□□□ -0.98
SDF2-208ENST00000589788 OSBPL10Q9BXB5 764 aa8.96□□□□□ -0.98
SDF2-208ENST00000589788 GABARAPL1Q9H0R8 117 aa8.96□□□□□ -0.98
SDF2-208ENST00000589788 OR52D1Q9H346 318 aa8.96□□□□□ -0.98
SDF2-208ENST00000589788 RERGLQ9H628 205 aa8.96□□□□□ -0.98
SDF2-208ENST00000589788 ZNF442Q9H7R0 627 aa8.96□□□□□ -0.98
SDF2-208ENST00000589788 CDH20Q9HBT6 801 aa8.96□□□□□ -0.98
SDF2-208ENST00000589788 C8orf4Q9NR00 106 aa8.96□□□□□ -0.98
SDF2-208ENST00000589788 MAP1AP78559 2803 aaPredicted RBP8.96□□□□□ -0.98
SDF2-208ENST00000589788 C12orf71A8MTZ7 269 aa8.95□□□□□ -0.98
SDF2-208ENST00000589788 B9A039 149 aa8.95□□□□□ -0.98
SDF2-208ENST00000589788 H7C1Q1 480 aa8.95□□□□□ -0.98
SDF2-208ENST00000589788 H7C417 338 aa8.95□□□□□ -0.98
SDF2-208ENST00000589788 SLC16A7O60669 478 aa8.95□□□□□ -0.98
SDF2-208ENST00000589788 NDUFS7O75251 213 aa8.95□□□□□ -0.98
SDF2-208ENST00000589788 H2AFB1P0C5Y9 115 aa8.95□□□□□ -0.98
SDF2-208ENST00000589788 H2AFB2P0C5Z0 115 aa8.95□□□□□ -0.98
SDF2-208ENST00000589788 ZNF35P13682 527 aa8.95□□□□□ -0.98
SDF2-208ENST00000589788 APEHP13798 732 aaKnown RBP8.95□□□□□ -0.98
SDF2-208ENST00000589788 FOSL1P15407 271 aa8.95□□□□□ -0.98
SDF2-208ENST00000589788 MSR1P21757 451 aa8.95□□□□□ -0.98
SDF2-208ENST00000589788 LAP3P28838 519 aa8.95□□□□□ -0.98
SDF2-208ENST00000589788 APLNRP35414 380 aa8.95□□□□□ -0.98
SDF2-208ENST00000589788 GSSP48637 474 aa8.95□□□□□ -0.98
SDF2-208ENST00000589788 NUDT6P53370 316 aa8.95□□□□□ -0.98
SDF2-208ENST00000589788 PCBD1P61457 104 aa8.95□□□□□ -0.98
SDF2-208ENST00000589788 PPP1R8Q12972 351 aaKnown RBP8.95□□□□□ -0.98
SDF2-208ENST00000589788 EFNB3Q15768 340 aa8.95□□□□□ -0.98
SDF2-208ENST00000589788 MICAQ29983 383 aa8.95□□□□□ -0.98
SDF2-208ENST00000589788 CLEC12BQ2HXU8 276 aa8.95□□□□□ -0.98
SDF2-208ENST00000589788 TBC1D28Q2M2D7 210 aa8.95□□□□□ -0.98
SDF2-208ENST00000589788 PABPC1L2AQ5JQF8 200 aa8.95□□□□□ -0.98
SDF2-208ENST00000589788 FAM27BQ5VT28 67 aa8.95□□□□□ -0.98
SDF2-208ENST00000589788 LPCAT4Q643R3 524 aa8.95□□□□□ -0.98
SDF2-208ENST00000589788 RPL13AP3Q6NVV1 102 aa8.95□□□□□ -0.98
SDF2-208ENST00000589788 ZNF620Q6ZNG0 422 aa8.95□□□□□ -0.98
SDF2-208ENST00000589788 ZNF584Q8IVC4 421 aa8.95□□□□□ -0.98
SDF2-208ENST00000589788 PACRGLQ8N7B6 248 aa8.95□□□□□ -0.98
SDF2-208ENST00000589788 AQP11Q8NBQ7 271 aa8.95□□□□□ -0.98
SDF2-208ENST00000589788 OR9Q2Q8NGE9 314 aa8.95□□□□□ -0.98
SDF2-208ENST00000589788 OR52L1Q8NGH7 329 aa8.95□□□□□ -0.98
SDF2-208ENST00000589788 C18orf12Q96KH6 178 aa8.95□□□□□ -0.98
SDF2-208ENST00000589788 SYT4Q9H2B2 425 aa8.95□□□□□ -0.98
SDF2-208ENST00000589788 VCX3BQ9H321 246 aa8.95□□□□□ -0.98
SDF2-208ENST00000589788 PLK3Q9H4B4 646 aa8.95□□□□□ -0.98
SDF2-208ENST00000589788 FBXO9Q9UK97 447 aaPredicted RBP8.95□□□□□ -0.98
SDF2-208ENST00000589788 CMAHPQ9Y471 501 aa8.95□□□□□ -0.98
SDF2-208ENST00000589788 FLNAP21333 2647 aaKnown RBP8.95□□□□□ -0.98
SDF2-208ENST00000589788 ARFGEF3Q5TH69 2177 aa8.94□□□□□ -0.98
SDF2-208ENST00000589788 TRIM64A6NGJ6 449 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms