RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 MBD3L2Q8NHZ7 208 aaPredicted RBP19.6■□□□□ 0.73
ATG4D-209ENST00000588857 ST7LQ8TDW4 575 aa19.6■□□□□ 0.73
ATG4D-209ENST00000588857 SLCO1C1Q9NYB5 712 aa19.6■□□□□ 0.73
ATG4D-209ENST00000588857 ASH2LQ9UBL3 628 aa19.6■□□□□ 0.73
ATG4D-209ENST00000588857 E9PI62 339 aa19.59■□□□□ 0.73
ATG4D-209ENST00000588857 J3QKU1 62 aa19.59■□□□□ 0.73
ATG4D-209ENST00000588857 OR3A2P47893 321 aa19.59■□□□□ 0.73
ATG4D-209ENST00000588857 RBPJQ06330 500 aa19.59■□□□□ 0.73
ATG4D-209ENST00000588857 FAPQ12884 760 aa19.59■□□□□ 0.73
ATG4D-209ENST00000588857 MRPL28Q13084 256 aaKnown RBP19.59■□□□□ 0.73
ATG4D-209ENST00000588857 GUSBP1Q15486 140 aa19.59■□□□□ 0.73
ATG4D-209ENST00000588857 FAM27BQ5VT28 67 aa19.59■□□□□ 0.73
ATG4D-209ENST00000588857 RTL6Q6ICC9 239 aa19.59■□□□□ 0.73
ATG4D-209ENST00000588857 LRRN1Q6UXK5 716 aa19.59■□□□□ 0.73
ATG4D-209ENST00000588857 ATCAYQ86WG3 371 aa19.59■□□□□ 0.73
ATG4D-209ENST00000588857 LRRC18Q8N456 261 aa19.59■□□□□ 0.73
ATG4D-209ENST00000588857 ELOVL3Q9HB03 270 aa19.59■□□□□ 0.73
ATG4D-209ENST00000588857 GDF2Q9UK05 429 aaPredicted RBP19.59■□□□□ 0.73
ATG4D-209ENST00000588857 HSPB2A8KAH6 182 aa19.58■□□□□ 0.73
ATG4D-209ENST00000588857 AIREO43918 545 aa19.58■□□□□ 0.73
ATG4D-209ENST00000588857 B4GALT1P15291 398 aa19.58■□□□□ 0.73
ATG4D-209ENST00000588857 NR4A1P22736 598 aa19.58■□□□□ 0.73
ATG4D-209ENST00000588857 GADD45AP24522 165 aa19.58■□□□□ 0.73
ATG4D-209ENST00000588857 PSMA1P25786 263 aaKnown RBP19.58■□□□□ 0.73
ATG4D-209ENST00000588857 GPR50Q13585 617 aa19.58■□□□□ 0.73
ATG4D-209ENST00000588857 HSPB2Q16082 182 aa19.58■□□□□ 0.73
ATG4D-209ENST00000588857 TIMM50Q3ZCQ8 353 aa19.58■□□□□ 0.73
ATG4D-209ENST00000588857 CCDC58Q4VC31 144 aa19.58■□□□□ 0.73
ATG4D-209ENST00000588857 LIPNQ5VXI9 398 aa19.58■□□□□ 0.73
ATG4D-209ENST00000588857 FBXW9Q5XUX1 488 aa19.58■□□□□ 0.73
ATG4D-209ENST00000588857 SLC16A12Q6ZSM3 486 aa19.58■□□□□ 0.73
ATG4D-209ENST00000588857 SLAMF6Q96DU3 332 aa19.58■□□□□ 0.73
ATG4D-209ENST00000588857 TP63Q9H3D4 680 aaPredicted RBP19.58■□□□□ 0.73
ATG4D-209ENST00000588857 PRSS50Q9UI38 385 aa19.58■□□□□ 0.73
ATG4D-209ENST00000588857 GRIP1Q9Y3R0 1128 aa19.58■□□□□ 0.73
ATG4D-209ENST00000588857 FAM215AQ9Y5M1 114 aa19.58■□□□□ 0.73
ATG4D-209ENST00000588857 ZNF254O75437 659 aa19.57■□□□□ 0.72
ATG4D-209ENST00000588857 RPP14O95059 124 aaKnown RBP19.57■□□□□ 0.72
ATG4D-209ENST00000588857 ABHD16AO95870 558 aa19.57■□□□□ 0.72
ATG4D-209ENST00000588857 EDN3P14138 238 aa19.57■□□□□ 0.72
ATG4D-209ENST00000588857 PSMB10P40306 273 aa19.57■□□□□ 0.72
ATG4D-209ENST00000588857 AQP6Q13520 282 aa19.57■□□□□ 0.72
ATG4D-209ENST00000588857 RPL22L1Q6P5R6 122 aaKnown RBP19.57■□□□□ 0.72
ATG4D-209ENST00000588857 DEGS2Q6QHC5 323 aa19.57■□□□□ 0.72
ATG4D-209ENST00000588857 ZNF813Q6ZN06 617 aa19.57■□□□□ 0.72
ATG4D-209ENST00000588857 HIST2H2ABQ8IUE6 130 aaPredicted RBP19.57■□□□□ 0.72
ATG4D-209ENST00000588857 SLC22A24Q8N4F4 322 aa19.57■□□□□ 0.72
ATG4D-209ENST00000588857 OR6K3Q8NGY3 331 aa19.57■□□□□ 0.72
ATG4D-209ENST00000588857 RNF133Q8WVZ7 376 aa19.57■□□□□ 0.72
ATG4D-209ENST00000588857 C12orf43Q96C57 262 aaKnown RBP19.57■□□□□ 0.72
ATG4D-209ENST00000588857 MAP6Q96JE9 813 aa19.57■□□□□ 0.72
ATG4D-209ENST00000588857 BCL7BQ9BQE9 202 aa19.57■□□□□ 0.72
ATG4D-209ENST00000588857 CENPMQ9NSP4 180 aa19.57■□□□□ 0.72
ATG4D-209ENST00000588857 MALT1Q9UDY8 824 aa19.57■□□□□ 0.72
ATG4D-209ENST00000588857 SIRT4Q9Y6E7 314 aaPredicted RBP19.57■□□□□ 0.72
ATG4D-209ENST00000588857 SPENQ96T58 3664 aaKnown RBP19.57■□□□□ 0.72
ATG4D-209ENST00000588857 H3BMQ9 156 aa19.57■□□□□ 0.72
ATG4D-209ENST00000588857 SLC19A2O60779 497 aa19.57■□□□□ 0.72
ATG4D-209ENST00000588857 GABARAPO95166 117 aa19.57■□□□□ 0.72
ATG4D-209ENST00000588857 FARS2O95363 451 aaKnown RBP19.57■□□□□ 0.72
ATG4D-209ENST00000588857 IL2RAP01589 272 aa19.57■□□□□ 0.72
ATG4D-209ENST00000588857 H2BFMP0C1H6 154 aa19.57■□□□□ 0.72
ATG4D-209ENST00000588857 KIR2DL2P43627 348 aaPredicted RBP19.57■□□□□ 0.72
ATG4D-209ENST00000588857 RIDAP52758 137 aaKnown RBP19.57■□□□□ 0.72
ATG4D-209ENST00000588857 ARF1P84077 181 aaKnown RBP19.57■□□□□ 0.72
ATG4D-209ENST00000588857 ENDOGQ14249 297 aaKnown RBP19.57■□□□□ 0.72
ATG4D-209ENST00000588857 EIF2S3LQ2VIR3 472 aaKnown RBP19.57■□□□□ 0.72
ATG4D-209ENST00000588857 NRN1LQ496H8 165 aa19.57■□□□□ 0.72
ATG4D-209ENST00000588857 ARL9Q6T311 187 aa19.57■□□□□ 0.72
ATG4D-209ENST00000588857 CFAP77Q6ZQR2 320 aa19.57■□□□□ 0.72
ATG4D-209ENST00000588857 GJC3Q8NFK1 279 aa19.57■□□□□ 0.72
ATG4D-209ENST00000588857 DOK1Q99704 481 aa19.57■□□□□ 0.72
ATG4D-209ENST00000588857 SH3GL3Q99963 347 aa19.57■□□□□ 0.72
ATG4D-209ENST00000588857 STUB1Q9UNE7 303 aa19.57■□□□□ 0.72
ATG4D-209ENST00000588857 INTS1Q8N201 2190 aaKnown RBP19.57■□□□□ 0.72
ATG4D-209ENST00000588857 CRHP06850 196 aa19.56■□□□□ 0.72
ATG4D-209ENST00000588857 CST2P09228 141 aa19.56■□□□□ 0.72
ATG4D-209ENST00000588857 GABRA5P31644 462 aa19.56■□□□□ 0.72
ATG4D-209ENST00000588857 TGM4P49221 684 aa19.56■□□□□ 0.72
ATG4D-209ENST00000588857 CTF1Q16619 201 aa19.56■□□□□ 0.72
ATG4D-209ENST00000588857 C9orf135Q5VTT2 229 aa19.56■□□□□ 0.72
ATG4D-209ENST00000588857 OR7E24Q6IFN5 339 aa19.56■□□□□ 0.72
ATG4D-209ENST00000588857 C3P1Q6ZMU1 363 aa19.56■□□□□ 0.72
ATG4D-209ENST00000588857 SEM1Q6ZVN7 128 aa19.56■□□□□ 0.72
ATG4D-209ENST00000588857 DOLPP1Q86YN1 238 aa19.56■□□□□ 0.72
ATG4D-209ENST00000588857 TMEM203Q969S6 136 aa19.56■□□□□ 0.72
ATG4D-209ENST00000588857 ZFP3Q96NJ6 502 aa19.56■□□□□ 0.72
ATG4D-209ENST00000588857 CHCHD6Q9BRQ6 235 aa19.56■□□□□ 0.72
ATG4D-209ENST00000588857 OR51E2Q9H255 320 aa19.56■□□□□ 0.72
ATG4D-209ENST00000588857 KCNN2Q9H2S1 579 aa19.56■□□□□ 0.72
ATG4D-209ENST00000588857 ST6GALNAC2Q9UJ37 374 aa19.56■□□□□ 0.72
ATG4D-209ENST00000588857 ZNF835Q9Y2P0 537 aa19.56■□□□□ 0.72
ATG4D-209ENST00000588857 LRP12Q9Y561 859 aa19.56■□□□□ 0.72
ATG4D-209ENST00000588857 HELZ2Q9BYK8 2649 aaKnown RBP19.55■□□□□ 0.72
ATG4D-209ENST00000588857 TRBV2A0A0J9YWF9 115 aa19.55■□□□□ 0.72
ATG4D-209ENST00000588857 LOC100506127A0A0U1RQW1 187 aa19.55■□□□□ 0.72
ATG4D-209ENST00000588857 RER1O15258 196 aa19.55■□□□□ 0.72
ATG4D-209ENST00000588857 OGG1O15527 345 aa19.55■□□□□ 0.72
ATG4D-209ENST00000588857 PLPP2O43688 288 aa19.55■□□□□ 0.72
ATG4D-209ENST00000588857 WNT11O96014 354 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms