RNA–Protein interactions for RNA: ENST00000588713.1

LIG3-211, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-211ENST00000588713 EIF4E2O60573 245 aaKnown RBP3.72□□□□□ -1.81
LIG3-211ENST00000588713 RDH16O75452 317 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 CDC123O75794 336 aaPredicted RBP3.72□□□□□ -1.81
LIG3-211ENST00000588713 ATG12O94817 140 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 OR2F2O95006 317 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 SLC16A8O95907 504 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 EPPINO95925 133 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 PLATP00750 562 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 TGFB1P01137 390 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 IGLV1-40P01703 118 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 APOC3P02656 99 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 FCER2P06734 321 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 HNRNPCL4P0DMR1 293 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 CALCBP10092 127 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 NR2F1P10589 423 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 FOLR2P14207 255 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 ATF1P18846 271 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 PVALBP20472 110 aaPredicted RBP3.72□□□□□ -1.81
LIG3-211ENST00000588713 NT5EP21589 574 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 SHC1P29353 583 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 NTSP30990 170 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 PRKAR1BP31321 381 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 RPL35P42766 123 aaKnown RBP3.72□□□□□ -1.81
LIG3-211ENST00000588713 CAPZBP47756 277 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 PTH2RP49190 550 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 SPINT3P49223 89 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 GPR143P51810 404 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 NR0B1P51843 470 aaKnown RBP3.72□□□□□ -1.81
LIG3-211ENST00000588713 AKR1D1P51857 326 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 CASP9P55211 416 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 SNRPD1P62314 119 aaKnown RBP3.72□□□□□ -1.81
LIG3-211ENST00000588713 RPS26P62854 115 aaKnown RBP3.72□□□□□ -1.81
LIG3-211ENST00000588713 SSBP1Q04837 148 aaKnown RBP3.72□□□□□ -1.81
LIG3-211ENST00000588713 PIN1Q13526 163 aaPredicted RBP3.72□□□□□ -1.81
LIG3-211ENST00000588713 OR2F1Q13607 317 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 GGTLC2Q14390 218 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 INSL4Q14641 139 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 DAZAP2Q15038 168 aaPredicted RBP3.72□□□□□ -1.81
LIG3-211ENST00000588713 GPR68Q15743 365 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 ZSWIM7Q19AV6 140 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 HYAL4Q2M3T9 481 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 TMEM52BQ4KMG9 183 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 FAM74A3Q4VXF1 159 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 EIPR1Q53HC9 387 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 RNASE12Q5GAN4 147 aaKnown RBP3.72□□□□□ -1.81
LIG3-211ENST00000588713 FAM209BQ5JX69 171 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 C1orf189Q5VU69 101 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 ZNF660Q6AZW8 331 aaPredicted RBP3.72□□□□□ -1.81
LIG3-211ENST00000588713 DMKNQ6E0U4 476 aaPredicted RBP3.72□□□□□ -1.81
LIG3-211ENST00000588713 SLC25A25Q6KCM7 469 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 ABHD17CQ6PCB6 329 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 HAGHLQ6PII5 290 aaPredicted RBP3.72□□□□□ -1.81
LIG3-211ENST00000588713 ARL9Q6T311 187 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 ATRAIDQ6UW56 229 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 LCTLQ6UWM7 567 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 B3GLCTQ6Y288 498 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 DNM1P46Q6ZS02 220 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 MBOAT2Q6ZWT7 520 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 MOB3CQ70IA8 216 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 MEPCEQ7L2J0 689 aaKnown RBP3.72□□□□□ -1.81
LIG3-211ENST00000588713 C6orf120Q7Z4R8 191 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 CEACAM19Q7Z692 300 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 KRT77Q7Z794 578 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 COMTD1Q86VU5 262 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 NUDT13Q86X67 352 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 RBM45Q8IUH3 476 aaKnown RBP3.72□□□□□ -1.81
LIG3-211ENST00000588713 SPAG16Q8N0X2 631 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 SHISA5Q8N114 240 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 KRT78Q8N1N4 520 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 SYS1Q8N2H4 156 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 TRAM1L1Q8N609 369 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 TMEM99Q8N816 258 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 POMGNT2Q8NAT1 580 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 BEST4Q8NFU0 473 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 OR2AK2Q8NG84 335 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 OR2AP1Q8NGE2 309 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 OR56A1Q8NGH5 318 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 OR4D10Q8NGI6 311 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 OR51G2Q8NGK0 314 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 OR6T1Q8NGN1 323 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 OR10K1Q8NGX5 313 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 OR6S1Q8NH40 331 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 OR5W2Q8NH69 310 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 LINC01560Q8TB33 94 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 RPS4Y2Q8TD47 263 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 ELP5Q8TE02 316 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 SFT2D1Q8WV19 159 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 NEIL2Q969S2 332 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 ZDHHC12Q96GR4 267 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 FAM46AQ96IP4 442 aaKnown RBP3.72□□□□□ -1.81
LIG3-211ENST00000588713 ARL5BQ96KC2 179 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 C12orf66Q96MD2 445 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 SIGLEC12Q96PQ1 595 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 GPA33Q99795 319 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 SEC22CQ9BRL7 303 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 PDCD10Q9BUL8 212 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 C1QTNF6Q9BXI9 259 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 MS4A8Q9BY19 250 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 CHIAQ9BZP6 476 aa3.72□□□□□ -1.81
LIG3-211ENST00000588713 PITHD1Q9GZP4 211 aaPredicted RBP3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms