RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 OR2Z1Q8NG97 314 aa11.54□□□□□ -0.56
CLPTM1-208ENST00000588274 OR52E2Q8NGJ4 325 aa11.54□□□□□ -0.56
CLPTM1-208ENST00000588274 TMEM239Q8WW34 195 aa11.54□□□□□ -0.56
CLPTM1-208ENST00000588274 SGTBQ96EQ0 304 aa11.54□□□□□ -0.56
CLPTM1-208ENST00000588274 CITED1Q99966 193 aa11.54□□□□□ -0.56
CLPTM1-208ENST00000588274 ALG12Q9BV10 488 aa11.54□□□□□ -0.56
CLPTM1-208ENST00000588274 GCM1Q9NP62 436 aa11.54□□□□□ -0.56
CLPTM1-208ENST00000588274 TBCCD1Q9NVR7 557 aa11.54□□□□□ -0.56
CLPTM1-208ENST00000588274 ARMCX1Q9P291 453 aa11.54□□□□□ -0.56
CLPTM1-208ENST00000588274 STX18Q9P2W9 335 aaKnown RBP11.54□□□□□ -0.56
CLPTM1-208ENST00000588274 OR5V1Q9UGF6 321 aa11.54□□□□□ -0.56
CLPTM1-208ENST00000588274 TIMM10BQ9Y5J6 103 aa11.54□□□□□ -0.56
CLPTM1-208ENST00000588274 FXYD1O00168 92 aa11.53□□□□□ -0.56
CLPTM1-208ENST00000588274 HOXA3O43365 443 aaPredicted RBP11.53□□□□□ -0.56
CLPTM1-208ENST00000588274 OR5F1O95221 314 aa11.53□□□□□ -0.56
CLPTM1-208ENST00000588274 MDH2P40926 338 aaKnown RBP11.53□□□□□ -0.56
CLPTM1-208ENST00000588274 TOP3AQ13472 1001 aaPredicted RBP11.53□□□□□ -0.56
CLPTM1-208ENST00000588274 PIN1Q13526 163 aaPredicted RBP11.53□□□□□ -0.56
CLPTM1-208ENST00000588274 TAF11Q15544 211 aa11.53□□□□□ -0.56
CLPTM1-208ENST00000588274 VMACQ2NL98 169 aa11.53□□□□□ -0.56
CLPTM1-208ENST00000588274 ESCO2Q56NI9 601 aa11.53□□□□□ -0.56
CLPTM1-208ENST00000588274 C16orf87Q6PH81 154 aa11.53□□□□□ -0.56
CLPTM1-208ENST00000588274 UNQ6126/PRO20091Q6UXV3 157 aa11.53□□□□□ -0.56
CLPTM1-208ENST00000588274 SPATC1Q76KD6 591 aa11.53□□□□□ -0.56
CLPTM1-208ENST00000588274 NPEPL1Q8NDH3 523 aa11.53□□□□□ -0.56
CLPTM1-208ENST00000588274 OR2V2Q96R30 315 aa11.53□□□□□ -0.56
CLPTM1-208ENST00000588274 MS4A7Q9GZW8 240 aaPredicted RBP11.53□□□□□ -0.56
CLPTM1-208ENST00000588274 KCNN2Q9H2S1 579 aa11.53□□□□□ -0.56
CLPTM1-208ENST00000588274 TMBIM4Q9HC24 238 aa11.53□□□□□ -0.56
CLPTM1-208ENST00000588274 POLE4Q9NR33 117 aa11.53□□□□□ -0.56
CLPTM1-208ENST00000588274 NKIRAS1Q9NYS0 192 aa11.53□□□□□ -0.56
CLPTM1-208ENST00000588274 IL19Q9UHD0 177 aa11.53□□□□□ -0.56
CLPTM1-208ENST00000588274 RIMS3Q9UJD0 308 aa11.53□□□□□ -0.56
CLPTM1-208ENST00000588274 PPP1R3CQ9UQK1 317 aa11.53□□□□□ -0.56
CLPTM1-208ENST00000588274 A0A1B0GWJ7 208 aa11.52□□□□□ -0.57
CLPTM1-208ENST00000588274 GMNCA6NCL1 334 aa11.52□□□□□ -0.57
CLPTM1-208ENST00000588274 SHOX2O60902 331 aaPredicted RBP11.52□□□□□ -0.57
CLPTM1-208ENST00000588274 ABHD16AO95870 558 aa11.52□□□□□ -0.57
CLPTM1-208ENST00000588274 GPANK1O95872 356 aa11.52□□□□□ -0.57
CLPTM1-208ENST00000588274 COX5BP10606 129 aa11.52□□□□□ -0.57
CLPTM1-208ENST00000588274 ZNF26P17031 533 aaPredicted RBP11.52□□□□□ -0.57
CLPTM1-208ENST00000588274 TNFRSF1AP19438 455 aa11.52□□□□□ -0.57
CLPTM1-208ENST00000588274 MSR1P21757 451 aa11.52□□□□□ -0.57
CLPTM1-208ENST00000588274 RPL27P61353 136 aaKnown RBP11.52□□□□□ -0.57
CLPTM1-208ENST00000588274 DEFB112Q30KQ8 113 aa11.52□□□□□ -0.57
CLPTM1-208ENST00000588274 ALG10Q5BKT4 473 aa11.52□□□□□ -0.57
CLPTM1-208ENST00000588274 VASH1Q7L8A9 365 aaPredicted RBP11.52□□□□□ -0.57
CLPTM1-208ENST00000588274 SYT9Q86SS6 491 aa11.52□□□□□ -0.57
CLPTM1-208ENST00000588274 IGFN1Q86VF2 1251 aa11.52□□□□□ -0.57
CLPTM1-208ENST00000588274 CALHM3Q86XJ0 350 aa11.52□□□□□ -0.57
CLPTM1-208ENST00000588274 KLBQ86Z14 1044 aa11.52□□□□□ -0.57
CLPTM1-208ENST00000588274 SLC30A8Q8IWU4 369 aa11.52□□□□□ -0.57
CLPTM1-208ENST00000588274 OR10A6Q8NH74 314 aa11.52□□□□□ -0.57
CLPTM1-208ENST00000588274 LRRC8CQ8TDW0 803 aa11.52□□□□□ -0.57
CLPTM1-208ENST00000588274 STON2Q8WXE9 905 aa11.52□□□□□ -0.57
CLPTM1-208ENST00000588274 HAVCR1Q96D42 359 aa11.52□□□□□ -0.57
CLPTM1-208ENST00000588274 SSBP3Q9BWW4 388 aaPredicted RBP11.52□□□□□ -0.57
CLPTM1-208ENST00000588274 POLR2J2Q9GZM3 115 aaKnown RBP11.52□□□□□ -0.57
CLPTM1-208ENST00000588274 POLR2J3Q9H1A7 115 aaKnown RBP11.52□□□□□ -0.57
CLPTM1-208ENST00000588274 ELOVL3Q9HB03 270 aa11.52□□□□□ -0.57
CLPTM1-208ENST00000588274 TMEM165Q9HC07 324 aa11.52□□□□□ -0.57
CLPTM1-208ENST00000588274 EMC7Q9NPA0 242 aa11.52□□□□□ -0.57
CLPTM1-208ENST00000588274 MAN2C1Q9NTJ4 1040 aa11.52□□□□□ -0.57
CLPTM1-208ENST00000588274 IL20RAQ9UHF4 553 aa11.52□□□□□ -0.57
CLPTM1-208ENST00000588274 NDRG4Q9ULP0 352 aaKnown RBP11.52□□□□□ -0.57
CLPTM1-208ENST00000588274 STARD10Q9Y365 291 aa11.52□□□□□ -0.57
CLPTM1-208ENST00000588274 SH3GLB1Q9Y371 365 aa11.52□□□□□ -0.57
CLPTM1-208ENST00000588274 KMT2CQ8NEZ4 4911 aaKnown RBP11.52□□□□□ -0.57
CLPTM1-208ENST00000588274 FAM181BA6NEQ2 426 aa11.51□□□□□ -0.57
CLPTM1-208ENST00000588274 FBP2O00757 339 aa11.51□□□□□ -0.57
CLPTM1-208ENST00000588274 FSTL3O95633 263 aa11.51□□□□□ -0.57
CLPTM1-208ENST00000588274 NR2C1P13056 603 aa11.51□□□□□ -0.57
CLPTM1-208ENST00000588274 GSTM3P21266 225 aa11.51□□□□□ -0.57
CLPTM1-208ENST00000588274 MTNR1AP48039 350 aa11.51□□□□□ -0.57
CLPTM1-208ENST00000588274 ARHGDIAP52565 204 aa11.51□□□□□ -0.57
CLPTM1-208ENST00000588274 BRD3OSQ6XYD6 125 aa11.51□□□□□ -0.57
CLPTM1-208ENST00000588274 ZER1Q7Z7L7 766 aa11.51□□□□□ -0.57
CLPTM1-208ENST00000588274 MUC20Q8N307 709 aaPredicted RBP11.51□□□□□ -0.57
CLPTM1-208ENST00000588274 ZNF420Q8TAQ5 688 aaPredicted RBP11.51□□□□□ -0.57
CLPTM1-208ENST00000588274 SLC7A6Q92536 515 aa11.51□□□□□ -0.57
CLPTM1-208ENST00000588274 CMBLQ96DG6 245 aa11.51□□□□□ -0.57
CLPTM1-208ENST00000588274 THOC1Q96FV9 657 aaKnown RBP11.51□□□□□ -0.57
CLPTM1-208ENST00000588274 C1RLQ9NZP8 487 aa11.51□□□□□ -0.57
CLPTM1-208ENST00000588274 KIR2DS1A0A191URI9 304 aa11.5□□□□□ -0.57
CLPTM1-208ENST00000588274 A0A1W2PPL8 197 aa11.5□□□□□ -0.57
CLPTM1-208ENST00000588274 OR6C6A6NF89 314 aa11.5□□□□□ -0.57
CLPTM1-208ENST00000588274 SRRM5B3KS81 715 aa11.5□□□□□ -0.57
CLPTM1-208ENST00000588274 C22orf46C9J442 243 aa11.5□□□□□ -0.57
CLPTM1-208ENST00000588274 H7C1C5 153 aa11.5□□□□□ -0.57
CLPTM1-208ENST00000588274 MLNRO43193 412 aa11.5□□□□□ -0.57
CLPTM1-208ENST00000588274 DOK2O60496 412 aa11.5□□□□□ -0.57
CLPTM1-208ENST00000588274 NDUFA7O95182 113 aa11.5□□□□□ -0.57
CLPTM1-208ENST00000588274 ZNF205O95201 554 aa11.5□□□□□ -0.57
CLPTM1-208ENST00000588274 TUBG1P23258 451 aa11.5□□□□□ -0.57
CLPTM1-208ENST00000588274 PMELP40967 661 aa11.5□□□□□ -0.57
CLPTM1-208ENST00000588274 OR1E2P47887 323 aa11.5□□□□□ -0.57
CLPTM1-208ENST00000588274 RAG2P55895 527 aa11.5□□□□□ -0.57
CLPTM1-208ENST00000588274 TAS2R41P59536 307 aa11.5□□□□□ -0.57
CLPTM1-208ENST00000588274 PCBD1P61457 104 aa11.5□□□□□ -0.57
CLPTM1-208ENST00000588274 LCN6P62502 163 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms