RNA–Protein interactions for RNA: ENST00000587525.5

CACNA1A-209, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 1 (best)

Gene CACNA1A, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-209ENST00000587525 ZNF254O75437 659 aa12.44□□□□□ -0.42
CACNA1A-209ENST00000587525 TPPPO94811 219 aa12.44□□□□□ -0.42
CACNA1A-209ENST00000587525 TMEM225BP0DP42 221 aa12.44□□□□□ -0.42
CACNA1A-209ENST00000587525 DRD1P21728 446 aa12.44□□□□□ -0.42
CACNA1A-209ENST00000587525 EMP2P54851 167 aa12.44□□□□□ -0.42
CACNA1A-209ENST00000587525 TMEM255AQ5JRV8 349 aa12.44□□□□□ -0.42
CACNA1A-209ENST00000587525 WDR38Q5JTN6 314 aa12.44□□□□□ -0.42
CACNA1A-209ENST00000587525 SPIN3Q5JUX0 258 aa12.44□□□□□ -0.42
CACNA1A-209ENST00000587525 SLC16A13Q7RTY0 426 aa12.44□□□□□ -0.42
CACNA1A-209ENST00000587525 TMED6Q8WW62 240 aa12.44□□□□□ -0.42
CACNA1A-209ENST00000587525 MR1Q95460 341 aa12.44□□□□□ -0.42
CACNA1A-209ENST00000587525 GAS2L1Q99501 681 aaPredicted RBP12.44□□□□□ -0.42
CACNA1A-209ENST00000587525 LYRM4Q9HD34 91 aa12.44□□□□□ -0.42
CACNA1A-209ENST00000587525 CYR61O00622 381 aa12.44□□□□□ -0.42
CACNA1A-209ENST00000587525 NUDT21O43809 227 aaKnown RBP12.44□□□□□ -0.42
CACNA1A-209ENST00000587525 GPRIN2O60269 458 aa12.44□□□□□ -0.42
CACNA1A-209ENST00000587525 CSTBP04080 98 aaKnown RBP12.44□□□□□ -0.42
CACNA1A-209ENST00000587525 H3F3CQ6NXT2 135 aa12.44□□□□□ -0.42
CACNA1A-209ENST00000587525 SMIM4Q8WVI0 70 aa12.44□□□□□ -0.42
CACNA1A-209ENST00000587525 MARC2Q969Z3 335 aa12.44□□□□□ -0.42
CACNA1A-209ENST00000587525 SORCS2Q96PQ0 1159 aa12.44□□□□□ -0.42
CACNA1A-209ENST00000587525 STACQ99469 402 aa12.44□□□□□ -0.42
CACNA1A-209ENST00000587525 KLHDC3Q9BQ90 382 aa12.44□□□□□ -0.42
CACNA1A-209ENST00000587525 LRRC61Q9BV99 259 aa12.44□□□□□ -0.42
CACNA1A-209ENST00000587525 NKX6-2Q9C056 277 aaPredicted RBP12.44□□□□□ -0.42
CACNA1A-209ENST00000587525 TMEM200CA6NKL6 621 aa12.44□□□□□ -0.42
CACNA1A-209ENST00000587525 NXPH3O95157 252 aa12.44□□□□□ -0.42
CACNA1A-209ENST00000587525 GAB4Q2WGN9 574 aa12.44□□□□□ -0.42
CACNA1A-209ENST00000587525 C14orf28Q4W4Y0 310 aa12.44□□□□□ -0.42
CACNA1A-209ENST00000587525 ZNF595Q8IYB9 648 aa12.44□□□□□ -0.42
CACNA1A-209ENST00000587525 OR2I1PQ8NGU4 316 aa12.44□□□□□ -0.42
CACNA1A-209ENST00000587525 SCARB1Q8WTV0 552 aa12.44□□□□□ -0.42
CACNA1A-209ENST00000587525 NUDT9Q9BW91 350 aa12.44□□□□□ -0.42
CACNA1A-209ENST00000587525 CST11Q9H112 138 aa12.44□□□□□ -0.42
CACNA1A-209ENST00000587525 SLC22A11Q9NSA0 550 aa12.44□□□□□ -0.42
CACNA1A-209ENST00000587525 EXOGQ9Y2C4 368 aaKnown RBP12.44□□□□□ -0.42
CACNA1A-209ENST00000587525 FAM230AA0A1W2PPH8 454 aa12.43□□□□□ -0.42
CACNA1A-209ENST00000587525 GABARAPH6UMI1 98 aa12.43□□□□□ -0.42
CACNA1A-209ENST00000587525 B3GALNT1O75752 331 aa12.43□□□□□ -0.42
CACNA1A-209ENST00000587525 IGHA1P01876 353 aa12.43□□□□□ -0.42
CACNA1A-209ENST00000587525 HLA-DOBP13765 273 aa12.43□□□□□ -0.42
CACNA1A-209ENST00000587525 GNB3P16520 340 aa12.43□□□□□ -0.42
CACNA1A-209ENST00000587525 DYRK1AQ13627 763 aa12.43□□□□□ -0.42
CACNA1A-209ENST00000587525 RBMS2Q15434 407 aaKnown RBP12.43□□□□□ -0.42
CACNA1A-209ENST00000587525 PAN3Q58A45 887 aaKnown RBP12.43□□□□□ -0.42
CACNA1A-209ENST00000587525 ZNF585AQ6P3V2 769 aa12.43□□□□□ -0.42
CACNA1A-209ENST00000587525 PIGTQ969N2 578 aa12.43□□□□□ -0.42
CACNA1A-209ENST00000587525 MENTQ9BUN1 341 aa12.43□□□□□ -0.42
CACNA1A-209ENST00000587525 EVA1AQ9H8M9 152 aa12.43□□□□□ -0.42
CACNA1A-209ENST00000587525 FRRS1LQ9P0K9 344 aa12.43□□□□□ -0.42
CACNA1A-209ENST00000587525 MRM2Q9UI43 246 aaKnown RBP12.43□□□□□ -0.42
CACNA1A-209ENST00000587525 LSM5Q9Y4Y9 91 aaKnown RBP12.43□□□□□ -0.42
CACNA1A-209ENST00000587525 A0A087WUJ7 227 aa12.43□□□□□ -0.42
CACNA1A-209ENST00000587525 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.43□□□□□ -0.42
CACNA1A-209ENST00000587525 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.43□□□□□ -0.42
CACNA1A-209ENST00000587525 SHOXO15266 292 aa12.43□□□□□ -0.42
CACNA1A-209ENST00000587525 CTLA4P16410 223 aa12.43□□□□□ -0.42
CACNA1A-209ENST00000587525 ZNF43P17038 809 aa12.43□□□□□ -0.42
CACNA1A-209ENST00000587525 RAB6AP20340 208 aa12.43□□□□□ -0.42
CACNA1A-209ENST00000587525 HNRNPKP61978 463 aaKnown RBP eCLIP12.43□□□□□ -0.42
CACNA1A-209ENST00000587525 CSNK2A1P68400 391 aaPredicted RBP12.43□□□□□ -0.42
CACNA1A-209ENST00000587525 SERTAD2Q14140 314 aa12.43□□□□□ -0.42
CACNA1A-209ENST00000587525 SGCBQ16585 318 aa12.43□□□□□ -0.42
CACNA1A-209ENST00000587525 DMKNQ6E0U4 476 aaPredicted RBP12.43□□□□□ -0.42
CACNA1A-209ENST00000587525 SLC16A9Q7RTY1 509 aa12.43□□□□□ -0.42
CACNA1A-209ENST00000587525 ESX1Q8N693 406 aa12.43□□□□□ -0.42
CACNA1A-209ENST00000587525 ARIH2OSQ8N7S6 290 aa12.43□□□□□ -0.42
CACNA1A-209ENST00000587525 NPEPL1Q8NDH3 523 aa12.43□□□□□ -0.42
CACNA1A-209ENST00000587525 CSNK2A3Q8NEV1 391 aa12.43□□□□□ -0.42
CACNA1A-209ENST00000587525 SCMH1Q96GD3 660 aa12.43□□□□□ -0.42
CACNA1A-209ENST00000587525 CMSS1Q9BQ75 279 aaKnown RBP12.43□□□□□ -0.42
CACNA1A-209ENST00000587525 LMF2Q9BU23 707 aaKnown RBP12.43□□□□□ -0.42
CACNA1A-209ENST00000587525 GPN3Q9UHW5 284 aaPredicted RBP12.43□□□□□ -0.42
CACNA1A-209ENST00000587525 LOC107986453A0A1B0GWG9 222 aa12.43□□□□□ -0.42
CACNA1A-209ENST00000587525 NME2P22392 152 aa12.43□□□□□ -0.42
CACNA1A-209ENST00000587525 SDHAP31040 664 aa12.43□□□□□ -0.42
CACNA1A-209ENST00000587525 PPT1P50897 306 aa12.43□□□□□ -0.42
CACNA1A-209ENST00000587525 CAPZA1P52907 286 aa12.43□□□□□ -0.42
CACNA1A-209ENST00000587525 CLINT1Q14677 625 aa12.43□□□□□ -0.42
CACNA1A-209ENST00000587525 MFSD13AQ14CX5 517 aa12.43□□□□□ -0.42
CACNA1A-209ENST00000587525 KIAA0895LQ68EN5 471 aa12.43□□□□□ -0.42
CACNA1A-209ENST00000587525 ANGPTL5Q86XS5 388 aa12.43□□□□□ -0.42
CACNA1A-209ENST00000587525 SLC2A4RGQ9NR83 387 aa12.43□□□□□ -0.42
CACNA1A-209ENST00000587525 SERINC1Q9NRX5 453 aa12.43□□□□□ -0.42
CACNA1A-209ENST00000587525 SHANK1Q9Y566 2161 aa12.42□□□□□ -0.42
CACNA1A-209ENST00000587525 LINC00862A6NCI5 91 aa12.42□□□□□ -0.42
CACNA1A-209ENST00000587525 ACAA2P42765 397 aaKnown RBP12.42□□□□□ -0.42
CACNA1A-209ENST00000587525 C1orf140Q5VVS0 124 aa12.42□□□□□ -0.42
CACNA1A-209ENST00000587525 FAM199XQ6PEV8 388 aaPredicted RBP12.42□□□□□ -0.42
CACNA1A-209ENST00000587525 BRICD5Q6PL45 260 aa12.42□□□□□ -0.42
CACNA1A-209ENST00000587525 MUC20Q8N307 709 aaPredicted RBP12.42□□□□□ -0.42
CACNA1A-209ENST00000587525 OR51E1Q8TCB6 317 aa12.42□□□□□ -0.42
CACNA1A-209ENST00000587525 ARL5BQ96KC2 179 aa12.42□□□□□ -0.42
CACNA1A-209ENST00000587525 PRRG4Q9BZD6 226 aa12.42□□□□□ -0.42
CACNA1A-209ENST00000587525 ZNF230Q9UIE0 474 aaPredicted RBP12.42□□□□□ -0.42
CACNA1A-209ENST00000587525 FAM96BQ9Y3D0 163 aa12.42□□□□□ -0.42
CACNA1A-209ENST00000587525 RNF215Q9Y6U7 377 aa12.42□□□□□ -0.42
CACNA1A-209ENST00000587525 MCRIP1C9JLW8 97 aa12.42□□□□□ -0.42
CACNA1A-209ENST00000587525 DUX1O43812 170 aa12.42□□□□□ -0.42
CACNA1A-209ENST00000587525 NKX2-2O95096 273 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms