RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 SH3GLB1Q9Y371 365 aa9.82□□□□□ -0.84
LIG3-207ENST00000586119 MEGF8Q7Z7M0 2845 aa9.81□□□□□ -0.84
LIG3-207ENST00000586119 J3QLI3 93 aa9.81□□□□□ -0.84
LIG3-207ENST00000586119 CXCR6O00574 342 aa9.81□□□□□ -0.84
LIG3-207ENST00000586119 DNAJC8O75937 253 aaPredicted RBP9.81□□□□□ -0.84
LIG3-207ENST00000586119 HKR1P10072 659 aa9.81□□□□□ -0.84
LIG3-207ENST00000586119 LAP3P28838 519 aa9.81□□□□□ -0.84
LIG3-207ENST00000586119 GCH1P30793 250 aa9.81□□□□□ -0.84
LIG3-207ENST00000586119 OR1E2P47887 323 aa9.81□□□□□ -0.84
LIG3-207ENST00000586119 MRPS34P82930 218 aaKnown RBP9.81□□□□□ -0.84
LIG3-207ENST00000586119 TOP3AQ13472 1001 aaPredicted RBP9.81□□□□□ -0.84
LIG3-207ENST00000586119 TUSC1Q2TAM9 212 aa9.81□□□□□ -0.84
LIG3-207ENST00000586119 NRN1LQ496H8 165 aa9.81□□□□□ -0.84
LIG3-207ENST00000586119 OTPQ5XKR4 325 aa9.81□□□□□ -0.84
LIG3-207ENST00000586119 ZNF774Q6NX45 483 aa9.81□□□□□ -0.84
LIG3-207ENST00000586119 DPPA2Q7Z7J5 298 aa9.81□□□□□ -0.84
LIG3-207ENST00000586119 IGFN1Q86VF2 1251 aa9.81□□□□□ -0.84
LIG3-207ENST00000586119 ABHD4Q8TB40 342 aa9.81□□□□□ -0.84
LIG3-207ENST00000586119 SLC26A7Q8TE54 656 aa9.81□□□□□ -0.84
LIG3-207ENST00000586119 SGTBQ96EQ0 304 aa9.81□□□□□ -0.84
LIG3-207ENST00000586119 SLC19A3Q9BZV2 496 aa9.81□□□□□ -0.84
LIG3-207ENST00000586119 PCDHAC1Q9H158 963 aa9.81□□□□□ -0.84
LIG3-207ENST00000586119 GORASP2Q9H8Y8 452 aa9.81□□□□□ -0.84
LIG3-207ENST00000586119 DDX28Q9NUL7 540 aaKnown RBP9.81□□□□□ -0.84
LIG3-207ENST00000586119 RIMS3Q9UJD0 308 aa9.81□□□□□ -0.84
LIG3-207ENST00000586119 BAG5Q9UL15 447 aa9.81□□□□□ -0.84
LIG3-207ENST00000586119 NPTNQ9Y639 398 aa9.81□□□□□ -0.84
LIG3-207ENST00000586119 IGHV3OR16-10A0A075B7F0 116 aa9.8□□□□□ -0.84
LIG3-207ENST00000586119 GSC2O15499 205 aa9.8□□□□□ -0.84
LIG3-207ENST00000586119 IGHV2-70P01814 119 aa9.8□□□□□ -0.84
LIG3-207ENST00000586119 MT-ND5P03915 603 aa9.8□□□□□ -0.84
LIG3-207ENST00000586119 TSPAN19P0C672 248 aa9.8□□□□□ -0.84
LIG3-207ENST00000586119 FPR2P25090 351 aa9.8□□□□□ -0.84
LIG3-207ENST00000586119 GDI2P50395 445 aaKnown RBP9.8□□□□□ -0.84
LIG3-207ENST00000586119 ERFP50548 548 aa9.8□□□□□ -0.84
LIG3-207ENST00000586119 PPP1CBP62140 327 aa9.8□□□□□ -0.84
LIG3-207ENST00000586119 CD47Q08722 323 aa9.8□□□□□ -0.84
LIG3-207ENST00000586119 PSG7Q13046 419 aa9.8□□□□□ -0.84
LIG3-207ENST00000586119 MOGQ16653 247 aa9.8□□□□□ -0.84
LIG3-207ENST00000586119 FAM209AQ5JX71 171 aa9.8□□□□□ -0.84
LIG3-207ENST00000586119 MBNL2Q5VZF2 373 aaKnown RBP9.8□□□□□ -0.84
LIG3-207ENST00000586119 GLYATQ6IB77 296 aa9.8□□□□□ -0.84
LIG3-207ENST00000586119 Q6ZR03 302 aa9.8□□□□□ -0.84
LIG3-207ENST00000586119 TMEM239Q8WW34 195 aa9.8□□□□□ -0.84
LIG3-207ENST00000586119 LZICQ8WZA0 190 aa9.8□□□□□ -0.84
LIG3-207ENST00000586119 THTPAQ9BU02 230 aa9.8□□□□□ -0.84
LIG3-207ENST00000586119 OR2H1Q9GZK4 316 aa9.8□□□□□ -0.84
LIG3-207ENST00000586119 KCNN2Q9H2S1 579 aa9.8□□□□□ -0.84
LIG3-207ENST00000586119 EIF3KQ9UBQ5 218 aaKnown RBP9.8□□□□□ -0.84
LIG3-207ENST00000586119 RPS6KA6Q9UK32 745 aa9.8□□□□□ -0.84
LIG3-207ENST00000586119 SNX13Q9Y5W8 968 aa9.8□□□□□ -0.84
LIG3-207ENST00000586119 PLSCR5A0PG75 271 aa9.79□□□□□ -0.84
LIG3-207ENST00000586119 DNAJC9-AS1A6NH13 148 aa9.79□□□□□ -0.84
LIG3-207ENST00000586119 ENTPD5O75356 428 aa9.79□□□□□ -0.84
LIG3-207ENST00000586119 ZNF205O95201 554 aa9.79□□□□□ -0.84
LIG3-207ENST00000586119 TAS2R41P59536 307 aa9.79□□□□□ -0.84
LIG3-207ENST00000586119 SELENOWP63302 87 aa9.79□□□□□ -0.84
LIG3-207ENST00000586119 TNFAIP6P98066 277 aaPredicted RBP9.79□□□□□ -0.84
LIG3-207ENST00000586119 TRAP1Q12931 704 aaKnown RBP9.79□□□□□ -0.84
LIG3-207ENST00000586119 ZNF154Q13106 437 aa9.79□□□□□ -0.84
LIG3-207ENST00000586119 ENDOGQ14249 297 aaKnown RBP9.79□□□□□ -0.84
LIG3-207ENST00000586119 TRIM25Q14258 630 aaKnown RBP9.79□□□□□ -0.84
LIG3-207ENST00000586119 MTX3Q5HYI7 312 aa9.79□□□□□ -0.84
LIG3-207ENST00000586119 PRR31Q5SQ13 230 aa9.79□□□□□ -0.84
LIG3-207ENST00000586119 FAM27BQ5VT28 67 aa9.79□□□□□ -0.84
LIG3-207ENST00000586119 PGM2L1Q6PCE3 622 aa9.79□□□□□ -0.84
LIG3-207ENST00000586119 CBLL1Q75N03 491 aa9.79□□□□□ -0.84
LIG3-207ENST00000586119 TEX29Q8N6K0 151 aa9.79□□□□□ -0.84
LIG3-207ENST00000586119 RNF148Q8N7C7 305 aa9.79□□□□□ -0.84
LIG3-207ENST00000586119 LRRC75AQ8NAA5 344 aa9.79□□□□□ -0.84
LIG3-207ENST00000586119 ST7LQ8TDW4 575 aa9.79□□□□□ -0.84
LIG3-207ENST00000586119 SLC7A6Q92536 515 aa9.79□□□□□ -0.84
LIG3-207ENST00000586119 FAM162AQ96A26 154 aa9.79□□□□□ -0.84
LIG3-207ENST00000586119 MCUR1Q96AQ8 359 aa9.79□□□□□ -0.84
LIG3-207ENST00000586119 ASB9Q96DX5 294 aa9.79□□□□□ -0.84
LIG3-207ENST00000586119 C4orf45Q96LM5 186 aa9.79□□□□□ -0.84
LIG3-207ENST00000586119 EGLN1Q9GZT9 426 aa9.79□□□□□ -0.84
LIG3-207ENST00000586119 TXNIPQ9H3M7 391 aa9.79□□□□□ -0.84
LIG3-207ENST00000586119 EMC7Q9NPA0 242 aa9.79□□□□□ -0.84
LIG3-207ENST00000586119 TMEM106BQ9NUM4 274 aa9.79□□□□□ -0.84
LIG3-207ENST00000586119 ACTR3BQ9P1U1 418 aa9.79□□□□□ -0.84
LIG3-207ENST00000586119 GMPR2Q9P2T1 348 aaKnown RBP9.79□□□□□ -0.84
LIG3-207ENST00000586119 PURGQ9UJV8 347 aaKnown RBP9.79□□□□□ -0.84
LIG3-207ENST00000586119 SAMD4AQ9UPU9 718 aaKnown RBP9.79□□□□□ -0.84
LIG3-207ENST00000586119 CENPBD1B2RD01 187 aa9.78□□□□□ -0.84
LIG3-207ENST00000586119 H7C1C5 153 aa9.78□□□□□ -0.84
LIG3-207ENST00000586119 ARPC2O15144 300 aa9.78□□□□□ -0.84
LIG3-207ENST00000586119 FOXH1O75593 365 aa9.78□□□□□ -0.84
LIG3-207ENST00000586119 CD55P08174 381 aa9.78□□□□□ -0.84
LIG3-207ENST00000586119 ADH4P08319 380 aa9.78□□□□□ -0.84
LIG3-207ENST00000586119 ZNF12P17014 697 aa9.78□□□□□ -0.84
LIG3-207ENST00000586119 GATA3P23771 443 aa9.78□□□□□ -0.84
LIG3-207ENST00000586119 PRTN3P24158 256 aa9.78□□□□□ -0.84
LIG3-207ENST00000586119 YAP1P46937 504 aaKnown RBP9.78□□□□□ -0.84
LIG3-207ENST00000586119 SLC6A9P48067 706 aa9.78□□□□□ -0.84
LIG3-207ENST00000586119 DAP3P51398 398 aaKnown RBP9.78□□□□□ -0.84
LIG3-207ENST00000586119 CTXN1P60606 82 aa9.78□□□□□ -0.84
LIG3-207ENST00000586119 LCN6P62502 163 aa9.78□□□□□ -0.84
LIG3-207ENST00000586119 FOXL1Q12952 345 aa9.78□□□□□ -0.84
LIG3-207ENST00000586119 CDK5R2Q13319 367 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms