RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 OR52N5Q8NH56 324 aa12.75□□□□□ -0.37
CDK5RAP3-237ENST00000585163 OR1S1Q8NH92 325 aa12.75□□□□□ -0.37
CDK5RAP3-237ENST00000585163 DMRTA2Q96SC8 542 aa12.75□□□□□ -0.37
CDK5RAP3-237ENST00000585163 PCNX3Q9H6A9 2034 aa12.74□□□□□ -0.37
CDK5RAP3-237ENST00000585163 PCDH15Q96QU1 1955 aa12.74□□□□□ -0.37
CDK5RAP3-237ENST00000585163 A0A0A6YYH2 397 aa12.74□□□□□ -0.37
CDK5RAP3-237ENST00000585163 MEGF11A6BM72 1044 aa12.74□□□□□ -0.37
CDK5RAP3-237ENST00000585163 A6NJ64 397 aa12.74□□□□□ -0.37
CDK5RAP3-237ENST00000585163 PLPP3O14495 311 aa12.74□□□□□ -0.37
CDK5RAP3-237ENST00000585163 PTGS2P35354 604 aa12.74□□□□□ -0.37
CDK5RAP3-237ENST00000585163 EFNA3P52797 238 aa12.74□□□□□ -0.37
CDK5RAP3-237ENST00000585163 PLCXD2Q0VAA5 305 aa12.74□□□□□ -0.37
CDK5RAP3-237ENST00000585163 HLA-DQA1Q5Y7H0 255 aa12.74□□□□□ -0.37
CDK5RAP3-237ENST00000585163 HSD17B13Q7Z5P4 300 aaPredicted RBP12.74□□□□□ -0.37
CDK5RAP3-237ENST00000585163 ADGRE4PQ86SQ3 457 aa12.74□□□□□ -0.37
CDK5RAP3-237ENST00000585163 PDZD9Q8IXQ8 264 aa12.74□□□□□ -0.37
CDK5RAP3-237ENST00000585163 ARL6IP6Q8N6S5 226 aa12.74□□□□□ -0.37
CDK5RAP3-237ENST00000585163 BVESQ8NE79 360 aa12.74□□□□□ -0.37
CDK5RAP3-237ENST00000585163 OR51A2Q8NGJ7 313 aa12.74□□□□□ -0.37
CDK5RAP3-237ENST00000585163 LHFPL5Q8TAF8 219 aa12.74□□□□□ -0.37
CDK5RAP3-237ENST00000585163 STK35Q8TDR2 534 aa12.74□□□□□ -0.37
CDK5RAP3-237ENST00000585163 EDAQ92838 391 aa12.74□□□□□ -0.37
CDK5RAP3-237ENST00000585163 TINAGL1Q9GZM7 467 aaPredicted RBP12.74□□□□□ -0.37
CDK5RAP3-237ENST00000585163 CGGBP1Q9UFW8 167 aaPredicted RBP12.74□□□□□ -0.37
CDK5RAP3-237ENST00000585163 ZNF107Q9UII5 783 aaPredicted RBP12.74□□□□□ -0.37
CDK5RAP3-237ENST00000585163 COL5A1P20908 1838 aaPredicted RBP12.74□□□□□ -0.37
CDK5RAP3-237ENST00000585163 TRAV14DV4A0A0A6YYC5 116 aa12.73□□□□□ -0.37
CDK5RAP3-237ENST00000585163 TCRBV16S1A1N1A0A5B0 115 aa12.73□□□□□ -0.37
CDK5RAP3-237ENST00000585163 DCDC2BA2VCK2 349 aa12.73□□□□□ -0.37
CDK5RAP3-237ENST00000585163 M0QYG6 137 aa12.73□□□□□ -0.37
CDK5RAP3-237ENST00000585163 CD74P04233 296 aa12.73□□□□□ -0.37
CDK5RAP3-237ENST00000585163 AMY2AP04746 511 aa12.73□□□□□ -0.37
CDK5RAP3-237ENST00000585163 ZNF735P0CB33 412 aa12.73□□□□□ -0.37
CDK5RAP3-237ENST00000585163 CRABP1P29762 137 aa12.73□□□□□ -0.37
CDK5RAP3-237ENST00000585163 CLVS2Q5SYC1 327 aa12.73□□□□□ -0.37
CDK5RAP3-237ENST00000585163 EIF4E3Q8N5X7 224 aaKnown RBP12.73□□□□□ -0.37
CDK5RAP3-237ENST00000585163 EDEM2Q9BV94 578 aa12.73□□□□□ -0.37
CDK5RAP3-237ENST00000585163 WWTR1Q9GZV5 400 aa12.73□□□□□ -0.37
CDK5RAP3-237ENST00000585163 HHLA2Q9UM44 414 aa12.73□□□□□ -0.37
CDK5RAP3-237ENST00000585163 COA3Q9Y2R0 106 aaPredicted RBP12.73□□□□□ -0.37
CDK5RAP3-237ENST00000585163 R4GMQ9 66 aa12.73□□□□□ -0.37
CDK5RAP3-237ENST00000585163 MPZL1O95297 269 aa12.73□□□□□ -0.37
CDK5RAP3-237ENST00000585163 CYB5AP00167 134 aa12.73□□□□□ -0.37
CDK5RAP3-237ENST00000585163 CD8AP01732 235 aa12.73□□□□□ -0.37
CDK5RAP3-237ENST00000585163 ISG15P05161 165 aa12.73□□□□□ -0.37
CDK5RAP3-237ENST00000585163 NME1P15531 152 aaKnown RBP12.73□□□□□ -0.37
CDK5RAP3-237ENST00000585163 ABCD3P28288 659 aa12.73□□□□□ -0.37
CDK5RAP3-237ENST00000585163 PNLIPRP2P54317 469 aa12.73□□□□□ -0.37
CDK5RAP3-237ENST00000585163 MELKQ14680 651 aa12.73□□□□□ -0.37
CDK5RAP3-237ENST00000585163 NR0B2Q15466 257 aa12.73□□□□□ -0.37
CDK5RAP3-237ENST00000585163 ATPAF1Q5TC12 328 aaPredicted RBP12.73□□□□□ -0.37
CDK5RAP3-237ENST00000585163 GRINAQ7Z429 371 aa12.73□□□□□ -0.37
CDK5RAP3-237ENST00000585163 TMED4Q7Z7H5 227 aa12.73□□□□□ -0.37
CDK5RAP3-237ENST00000585163 GKN2Q86XP6 184 aa12.73□□□□□ -0.37
CDK5RAP3-237ENST00000585163 FAM174AQ8TBP5 190 aa12.73□□□□□ -0.37
CDK5RAP3-237ENST00000585163 GPR119Q8TDV5 335 aa12.73□□□□□ -0.37
CDK5RAP3-237ENST00000585163 LMX1AQ8TE12 382 aa12.73□□□□□ -0.37
CDK5RAP3-237ENST00000585163 MVB12AQ96EY5 273 aa12.73□□□□□ -0.37
CDK5RAP3-237ENST00000585163 GAL3ST1Q99999 423 aa12.73□□□□□ -0.37
CDK5RAP3-237ENST00000585163 MKL2Q9ULH7 1088 aa12.73□□□□□ -0.37
CDK5RAP3-237ENST00000585163 EMC9Q9Y3B6 208 aa12.73□□□□□ -0.37
CDK5RAP3-237ENST00000585163 FREM3P0C091 2139 aa12.73□□□□□ -0.37
CDK5RAP3-237ENST00000585163 KIF26BQ2KJY2 2108 aa12.73□□□□□ -0.37
CDK5RAP3-237ENST00000585163 LOC390937A0A1W2PQ73 354 aa12.72□□□□□ -0.37
CDK5RAP3-237ENST00000585163 ZNF736B4DX44 427 aaPredicted RBP12.72□□□□□ -0.37
CDK5RAP3-237ENST00000585163 ALOX12BO75342 701 aa12.72□□□□□ -0.37
CDK5RAP3-237ENST00000585163 SPDEFO95238 335 aa12.72□□□□□ -0.37
CDK5RAP3-237ENST00000585163 PRKACAP17612 351 aa12.72□□□□□ -0.37
CDK5RAP3-237ENST00000585163 PMPCAQ10713 525 aa12.72□□□□□ -0.37
CDK5RAP3-237ENST00000585163 BTN1A1Q13410 526 aa12.72□□□□□ -0.37
CDK5RAP3-237ENST00000585163 Q6ZS52 159 aa12.72□□□□□ -0.37
CDK5RAP3-237ENST00000585163 OR13C3Q8NGS6 347 aa12.72□□□□□ -0.37
CDK5RAP3-237ENST00000585163 DAZLQ92904 295 aaKnown RBP12.72□□□□□ -0.37
CDK5RAP3-237ENST00000585163 PTX4Q96A99 478 aa12.72□□□□□ -0.37
CDK5RAP3-237ENST00000585163 CMKLR1Q99788 373 aa12.72□□□□□ -0.37
CDK5RAP3-237ENST00000585163 OR11A1Q9GZK7 315 aa12.72□□□□□ -0.37
CDK5RAP3-237ENST00000585163 G6PC2Q9NQR9 355 aa12.72□□□□□ -0.37
CDK5RAP3-237ENST00000585163 DHCR7Q9UBM7 475 aaKnown RBP12.72□□□□□ -0.37
CDK5RAP3-237ENST00000585163 MSRAQ9UJ68 235 aa12.72□□□□□ -0.37
CDK5RAP3-237ENST00000585163 SEC16AO15027 2179 aa12.72□□□□□ -0.37
CDK5RAP3-237ENST00000585163 A0A1B0GTI1 187 aa12.72□□□□□ -0.37
CDK5RAP3-237ENST00000585163 TRIM77I1YAP6 450 aa12.72□□□□□ -0.37
CDK5RAP3-237ENST00000585163 LGALS8O00214 317 aa12.72□□□□□ -0.37
CDK5RAP3-237ENST00000585163 SDC3O75056 442 aa12.72□□□□□ -0.37
CDK5RAP3-237ENST00000585163 RLN2P04090 185 aa12.72□□□□□ -0.37
CDK5RAP3-237ENST00000585163 AGTR1P30556 359 aa12.72□□□□□ -0.37
CDK5RAP3-237ENST00000585163 DNASE1L1P49184 302 aa12.72□□□□□ -0.37
CDK5RAP3-237ENST00000585163 ARRB1P49407 418 aaPredicted RBP12.72□□□□□ -0.37
CDK5RAP3-237ENST00000585163 SPOCK1Q08629 439 aa12.72□□□□□ -0.37
CDK5RAP3-237ENST00000585163 MOGAT2Q3SYC2 334 aa12.72□□□□□ -0.37
CDK5RAP3-237ENST00000585163 C1orf100Q5SVJ3 147 aa12.72□□□□□ -0.37
CDK5RAP3-237ENST00000585163 ALKBH2Q6NS38 261 aa12.72□□□□□ -0.37
CDK5RAP3-237ENST00000585163 ZNF546Q86UE3 836 aa12.72□□□□□ -0.37
CDK5RAP3-237ENST00000585163 C17orf82Q86X59 251 aaPredicted RBP12.72□□□□□ -0.37
CDK5RAP3-237ENST00000585163 LYPD6Q86Y78 171 aa12.72□□□□□ -0.37
CDK5RAP3-237ENST00000585163 ZMAT3Q9HA38 289 aaKnown RBP12.72□□□□□ -0.37
CDK5RAP3-237ENST00000585163 FBXL2Q9UKC9 423 aa12.72□□□□□ -0.37
CDK5RAP3-237ENST00000585163 RP1P56715 2156 aa12.72□□□□□ -0.37
CDK5RAP3-237ENST00000585163 EYSQ5T1H1 3165 aa12.72□□□□□ -0.37
CDK5RAP3-237ENST00000585163 LOC107986453A0A1B0GWG9 222 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms