RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 TCRBV3S1A0A5B6 114 aa15.15■□□□□ 0.02
TOP3A-220ENST00000585031 FAM220BPB1ANY3 271 aa15.15■□□□□ 0.02
TOP3A-220ENST00000585031 SRRM5B3KS81 715 aa15.15■□□□□ 0.02
TOP3A-220ENST00000585031 DHHO43323 396 aa15.15■□□□□ 0.02
TOP3A-220ENST00000585031 TPST1O60507 370 aa15.15■□□□□ 0.02
TOP3A-220ENST00000585031 MT-ND5P03915 603 aa15.15■□□□□ 0.02
TOP3A-220ENST00000585031 CYP2R1Q6VVX0 501 aa15.15■□□□□ 0.02
TOP3A-220ENST00000585031 MSRB3Q8IXL7 192 aa15.15■□□□□ 0.02
TOP3A-220ENST00000585031 OR2T12Q8NG77 320 aa15.15■□□□□ 0.02
TOP3A-220ENST00000585031 OR6X1Q8NH79 312 aa15.15■□□□□ 0.02
TOP3A-220ENST00000585031 FAM110DQ8TAY7 271 aaPredicted RBP15.15■□□□□ 0.02
TOP3A-220ENST00000585031 SLC25A40Q8TBP6 338 aa15.15■□□□□ 0.02
TOP3A-220ENST00000585031 KLF14Q8TD94 323 aaPredicted RBP15.15■□□□□ 0.02
TOP3A-220ENST00000585031 SLC35B4Q969S0 331 aa15.15■□□□□ 0.02
TOP3A-220ENST00000585031 ASPNQ9BXN1 380 aa15.15■□□□□ 0.02
TOP3A-220ENST00000585031 OR2J1Q9GZK6 312 aa15.15■□□□□ 0.02
TOP3A-220ENST00000585031 TMEM106BQ9NUM4 274 aa15.15■□□□□ 0.02
TOP3A-220ENST00000585031 SLC25A37Q9NYZ2 338 aa15.15■□□□□ 0.02
TOP3A-220ENST00000585031 DNAH9Q9NYC9 4486 aa15.15■□□□□ 0.02
TOP3A-220ENST00000585031 G3V4G9 280 aa15.14■□□□□ 0.01
TOP3A-220ENST00000585031 CD55P08174 381 aa15.14■□□□□ 0.01
TOP3A-220ENST00000585031 THRBP10828 461 aa15.14■□□□□ 0.01
TOP3A-220ENST00000585031 UMPSP11172 480 aa15.14■□□□□ 0.01
TOP3A-220ENST00000585031 HOXB9P17482 250 aaPredicted RBP15.14■□□□□ 0.01
TOP3A-220ENST00000585031 CCNOP22674 350 aa15.14■□□□□ 0.01
TOP3A-220ENST00000585031 SELPLGQ14242 412 aa15.14■□□□□ 0.01
TOP3A-220ENST00000585031 MELKQ14680 651 aa15.14■□□□□ 0.01
TOP3A-220ENST00000585031 ZNF718Q3SXZ3 478 aa15.14■□□□□ 0.01
TOP3A-220ENST00000585031 TMEM155Q4W5P6 130 aa15.14■□□□□ 0.01
TOP3A-220ENST00000585031 KPRPQ5T749 579 aaPredicted RBP15.14■□□□□ 0.01
TOP3A-220ENST00000585031 ZNF774Q6NX45 483 aa15.14■□□□□ 0.01
TOP3A-220ENST00000585031 SLC35D2Q76EJ3 337 aa15.14■□□□□ 0.01
TOP3A-220ENST00000585031 SLC16A14Q7RTX9 510 aa15.14■□□□□ 0.01
TOP3A-220ENST00000585031 PQLC1Q8N2U9 271 aa15.14■□□□□ 0.01
TOP3A-220ENST00000585031 LRRC18Q8N456 261 aa15.14■□□□□ 0.01
TOP3A-220ENST00000585031 OR10S1Q8NGN2 331 aa15.14■□□□□ 0.01
TOP3A-220ENST00000585031 OR1J2Q8NGS2 313 aa15.14■□□□□ 0.01
TOP3A-220ENST00000585031 POM121L2Q96KW2 1035 aa15.14■□□□□ 0.01
TOP3A-220ENST00000585031 NSMCE2Q96MF7 247 aa15.14■□□□□ 0.01
TOP3A-220ENST00000585031 ARHGDIGQ99819 225 aa15.14■□□□□ 0.01
TOP3A-220ENST00000585031 C1orf198Q9H425 327 aa15.14■□□□□ 0.01
TOP3A-220ENST00000585031 RAD21L1Q9H4I0 556 aa15.14■□□□□ 0.01
TOP3A-220ENST00000585031 TPT1P8Q9HAU6 139 aa15.14■□□□□ 0.01
TOP3A-220ENST00000585031 BCL2L10Q9HD36 194 aa15.14■□□□□ 0.01
TOP3A-220ENST00000585031 TAS2R5Q9NYW4 299 aa15.14■□□□□ 0.01
TOP3A-220ENST00000585031 ELOVL7A1L3X0 281 aa15.13■□□□□ 0.01
TOP3A-220ENST00000585031 H3BNX3 289 aa15.13■□□□□ 0.01
TOP3A-220ENST00000585031 PIN1P1O15428 100 aa15.13■□□□□ 0.01
TOP3A-220ENST00000585031 QDPRP09417 244 aa15.13■□□□□ 0.01
TOP3A-220ENST00000585031 PGA4P0DJD7 388 aa15.13■□□□□ 0.01
TOP3A-220ENST00000585031 PGA3P0DJD8 388 aa15.13■□□□□ 0.01
TOP3A-220ENST00000585031 ADORA3P0DMS8 318 aa15.13■□□□□ 0.01
TOP3A-220ENST00000585031 PPIAL4GP0DN37 164 aa15.13■□□□□ 0.01
TOP3A-220ENST00000585031 ATP6V1B2P21281 511 aa15.13■□□□□ 0.01
TOP3A-220ENST00000585031 PABPC1L2AQ5JQF8 200 aa15.13■□□□□ 0.01
TOP3A-220ENST00000585031 MBNL2Q5VZF2 373 aaKnown RBP15.13■□□□□ 0.01
TOP3A-220ENST00000585031 ERICH5Q6P6B1 374 aa15.13■□□□□ 0.01
TOP3A-220ENST00000585031 ULK3Q6PHR2 472 aa15.13■□□□□ 0.01
TOP3A-220ENST00000585031 RFPL4BQ6ZWI9 263 aa15.13■□□□□ 0.01
TOP3A-220ENST00000585031 MICU2Q8IYU8 434 aa15.13■□□□□ 0.01
TOP3A-220ENST00000585031 KLHL36Q8N4N3 616 aa15.13■□□□□ 0.01
TOP3A-220ENST00000585031 SPICQ8N5J4 248 aa15.13■□□□□ 0.01
TOP3A-220ENST00000585031 ZNF283Q8N7M2 679 aa15.13■□□□□ 0.01
TOP3A-220ENST00000585031 OR10A6Q8NH74 314 aa15.13■□□□□ 0.01
TOP3A-220ENST00000585031 LINC01006Q8NI28 216 aa15.13■□□□□ 0.01
TOP3A-220ENST00000585031 DNAJA4Q8WW22 397 aaPredicted RBP15.13■□□□□ 0.01
TOP3A-220ENST00000585031 ZNF583Q96ND8 569 aa15.13■□□□□ 0.01
TOP3A-220ENST00000585031 EGLN1Q9GZT9 426 aa15.13■□□□□ 0.01
TOP3A-220ENST00000585031 ARMC7Q9H6L4 198 aa15.13■□□□□ 0.01
TOP3A-220ENST00000585031 KAT8Q9H7Z6 458 aaKnown RBP15.13■□□□□ 0.01
TOP3A-220ENST00000585031 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.13■□□□□ 0.01
TOP3A-220ENST00000585031 AP4S1Q9Y587 144 aa15.13■□□□□ 0.01
TOP3A-220ENST00000585031 A0A0B4J2E0 115 aa15.12■□□□□ 0.01
TOP3A-220ENST00000585031 IQCMA0A1B0GVH7 501 aa15.12■□□□□ 0.01
TOP3A-220ENST00000585031 A0A1B0GX12 115 aa15.12■□□□□ 0.01
TOP3A-220ENST00000585031 DHRS12A0PJE2 317 aa15.12■□□□□ 0.01
TOP3A-220ENST00000585031 CLIC1O00299 241 aa15.12■□□□□ 0.01
TOP3A-220ENST00000585031 CLPXO76031 633 aa15.12■□□□□ 0.01
TOP3A-220ENST00000585031 CRYBA1P05813 215 aa15.12■□□□□ 0.01
TOP3A-220ENST00000585031 WNT2P09544 360 aa15.12■□□□□ 0.01
TOP3A-220ENST00000585031 HOXB6P17509 224 aaKnown RBP15.12■□□□□ 0.01
TOP3A-220ENST00000585031 PROK1P58294 105 aa15.12■□□□□ 0.01
TOP3A-220ENST00000585031 BTG1P62324 171 aa15.12■□□□□ 0.01
TOP3A-220ENST00000585031 SLC36A2Q495M3 483 aa15.12■□□□□ 0.01
TOP3A-220ENST00000585031 GLYATQ6IB77 296 aa15.12■□□□□ 0.01
TOP3A-220ENST00000585031 Q6YL49 198 aa15.12■□□□□ 0.01
TOP3A-220ENST00000585031 CALHM3Q86XJ0 350 aa15.12■□□□□ 0.01
TOP3A-220ENST00000585031 C10orf53Q8N6V4 93 aa15.12■□□□□ 0.01
TOP3A-220ENST00000585031 OR5J2Q8NH18 312 aa15.12■□□□□ 0.01
TOP3A-220ENST00000585031 SLC47A1Q96FL8 570 aa15.12■□□□□ 0.01
TOP3A-220ENST00000585031 ZNF347Q96SE7 839 aa15.12■□□□□ 0.01
TOP3A-220ENST00000585031 GMPR2Q9P2T1 348 aaKnown RBP15.12■□□□□ 0.01
TOP3A-220ENST00000585031 RNF114Q9Y508 228 aa15.12■□□□□ 0.01
TOP3A-220ENST00000585031 GMEB1Q9Y692 573 aa15.12■□□□□ 0.01
TOP3A-220ENST00000585031 TENM3Q9P273 2699 aa15.11■□□□□ 0.01
TOP3A-220ENST00000585031 NOTCH3Q9UM47 2321 aa15.11■□□□□ 0.01
TOP3A-220ENST00000585031 PLSCR5A0PG75 271 aa15.11■□□□□ 0.01
TOP3A-220ENST00000585031 CEACAM18A8MTB9 384 aa15.11■□□□□ 0.01
TOP3A-220ENST00000585031 CASQ2O14958 399 aaPredicted RBP15.11■□□□□ 0.01
TOP3A-220ENST00000585031 FARS2O95363 451 aaKnown RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms