RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 FOXL2NBQ6ZUU3 175 aa12.06□□□□□ -0.48
TRAF4-215ENST00000584944 TRUB1Q8WWH5 349 aaKnown RBP12.06□□□□□ -0.48
TRAF4-215ENST00000584944 FBXO17Q96EF6 278 aa12.06□□□□□ -0.48
TRAF4-215ENST00000584944 HRASLS5Q96KN8 279 aa12.06□□□□□ -0.48
TRAF4-215ENST00000584944 PITX2Q99697 317 aa12.06□□□□□ -0.48
TRAF4-215ENST00000584944 B3GNT2Q9NY97 397 aa12.06□□□□□ -0.48
TRAF4-215ENST00000584944 NDRG4Q9ULP0 352 aaKnown RBP12.06□□□□□ -0.48
TRAF4-215ENST00000584944 ALPK2Q86TB3 2170 aa12.06□□□□□ -0.48
TRAF4-215ENST00000584944 LOC100130705A0A1B0GUX0 176 aa12.05□□□□□ -0.48
TRAF4-215ENST00000584944 C5orf49A4QMS7 147 aa12.05□□□□□ -0.48
TRAF4-215ENST00000584944 DPRXA6NFQ7 191 aa12.05□□□□□ -0.48
TRAF4-215ENST00000584944 SLC22A31A6NKX4 558 aa12.05□□□□□ -0.48
TRAF4-215ENST00000584944 ATP6V1G2-DDX39BF2Z307 99 aa12.05□□□□□ -0.48
TRAF4-215ENST00000584944 M0R129 80 aa12.05□□□□□ -0.48
TRAF4-215ENST00000584944 ZNF593O00488 134 aaPredicted RBP12.05□□□□□ -0.48
TRAF4-215ENST00000584944 CASQ2O14958 399 aaPredicted RBP12.05□□□□□ -0.48
TRAF4-215ENST00000584944 IGKV3-15P01624 115 aa12.05□□□□□ -0.48
TRAF4-215ENST00000584944 ENTPD1P49961 510 aa12.05□□□□□ -0.48
TRAF4-215ENST00000584944 RPS23P62266 143 aaKnown RBP12.05□□□□□ -0.48
TRAF4-215ENST00000584944 NAAAQ02083 359 aa12.05□□□□□ -0.48
TRAF4-215ENST00000584944 RIPK1Q13546 671 aa12.05□□□□□ -0.48
TRAF4-215ENST00000584944 ENDOGQ14249 297 aaKnown RBP12.05□□□□□ -0.48
TRAF4-215ENST00000584944 KCNMB1Q16558 191 aa12.05□□□□□ -0.48
TRAF4-215ENST00000584944 ZNF362Q5T0B9 420 aaPredicted RBP12.05□□□□□ -0.48
TRAF4-215ENST00000584944 OGFRL1Q5TC84 451 aaPredicted RBP12.05□□□□□ -0.48
TRAF4-215ENST00000584944 TTC23Q5W5X9 447 aa12.05□□□□□ -0.48
TRAF4-215ENST00000584944 ZNF774Q6NX45 483 aa12.05□□□□□ -0.48
TRAF4-215ENST00000584944 UGT2A3Q6UWM9 527 aa12.05□□□□□ -0.48
TRAF4-215ENST00000584944 SHFQ7M4L6 423 aa12.05□□□□□ -0.48
TRAF4-215ENST00000584944 LINC00346Q8IVM7 164 aa12.05□□□□□ -0.48
TRAF4-215ENST00000584944 DHRSXQ8N5I4 330 aa12.05□□□□□ -0.48
TRAF4-215ENST00000584944 ZNF511Q8NB15 262 aa12.05□□□□□ -0.48
TRAF4-215ENST00000584944 SETD9Q8NE22 299 aa12.05□□□□□ -0.48
TRAF4-215ENST00000584944 OR4F15Q8NGB8 312 aa12.05□□□□□ -0.48
TRAF4-215ENST00000584944 OR6N2Q8NGY6 317 aa12.05□□□□□ -0.48
TRAF4-215ENST00000584944 AKR7LQ8NHP1 331 aa12.05□□□□□ -0.48
TRAF4-215ENST00000584944 ZMYND19Q96E35 227 aaPredicted RBP12.05□□□□□ -0.48
TRAF4-215ENST00000584944 MS4A3Q96HJ5 214 aa12.05□□□□□ -0.48
TRAF4-215ENST00000584944 Q96MT0 163 aa12.05□□□□□ -0.48
TRAF4-215ENST00000584944 NMNAT2Q9BZQ4 307 aa12.05□□□□□ -0.48
TRAF4-215ENST00000584944 HINT3Q9NQE9 182 aaKnown RBP12.05□□□□□ -0.48
TRAF4-215ENST00000584944 FAM118AQ9NWS6 357 aa12.05□□□□□ -0.48
TRAF4-215ENST00000584944 CLN6Q9NWW5 311 aa12.05□□□□□ -0.48
TRAF4-215ENST00000584944 CRNNQ9UBG3 495 aaPredicted RBP12.05□□□□□ -0.48
TRAF4-215ENST00000584944 NKX1-2Q9UD57 310 aaPredicted RBP12.05□□□□□ -0.48
TRAF4-215ENST00000584944 PRRC2AP48634 2157 aaKnown RBP12.05□□□□□ -0.48
TRAF4-215ENST00000584944 ZNF503-AS2A6NEH8 195 aa12.04□□□□□ -0.48
TRAF4-215ENST00000584944 ATP6V1G2O95670 118 aa12.04□□□□□ -0.48
TRAF4-215ENST00000584944 TFP02787 698 aa12.04□□□□□ -0.48
TRAF4-215ENST00000584944 CELA3BP08861 270 aa12.04□□□□□ -0.48
TRAF4-215ENST00000584944 GAAP10253 952 aa12.04□□□□□ -0.48
TRAF4-215ENST00000584944 APEX1P27695 318 aaKnown RBP12.04□□□□□ -0.48
TRAF4-215ENST00000584944 SLC15A1P46059 708 aa12.04□□□□□ -0.48
TRAF4-215ENST00000584944 PSG4Q00888 419 aa12.04□□□□□ -0.48
TRAF4-215ENST00000584944 IL5RAQ01344 420 aa12.04□□□□□ -0.48
TRAF4-215ENST00000584944 ECH1Q13011 328 aa12.04□□□□□ -0.48
TRAF4-215ENST00000584944 RAB35Q15286 201 aa12.04□□□□□ -0.48
TRAF4-215ENST00000584944 MEDAGQ5VYS4 303 aa12.04□□□□□ -0.48
TRAF4-215ENST00000584944 NXNL2Q5VZ03 156 aa12.04□□□□□ -0.48
TRAF4-215ENST00000584944 OTPQ5XKR4 325 aa12.04□□□□□ -0.48
TRAF4-215ENST00000584944 CORO6Q6QEF8 472 aa12.04□□□□□ -0.48
TRAF4-215ENST00000584944 VHLLQ6RSH7 139 aa12.04□□□□□ -0.48
TRAF4-215ENST00000584944 SEZ6L2Q6UXD5 910 aa12.04□□□□□ -0.48
TRAF4-215ENST00000584944 CDC20BQ86Y33 519 aa12.04□□□□□ -0.48
TRAF4-215ENST00000584944 KBTBD8Q8NFY9 601 aa12.04□□□□□ -0.48
TRAF4-215ENST00000584944 AKAP1Q92667 903 aaKnown RBP eCLIP12.04□□□□□ -0.48
TRAF4-215ENST00000584944 PTP4A1Q93096 173 aa12.04□□□□□ -0.48
TRAF4-215ENST00000584944 FBXW5Q969U6 566 aa12.04□□□□□ -0.48
TRAF4-215ENST00000584944 MBOAT4Q96T53 435 aa12.04□□□□□ -0.48
TRAF4-215ENST00000584944 HCAR1Q9BXC0 346 aa12.04□□□□□ -0.48
TRAF4-215ENST00000584944 HDHD2Q9H0R4 259 aa12.04□□□□□ -0.48
TRAF4-215ENST00000584944 ZNF224Q9NZL3 707 aa12.04□□□□□ -0.48
TRAF4-215ENST00000584944 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.04□□□□□ -0.48
TRAF4-215ENST00000584944 COMMD3-BMI1R4GMX3 469 aa12.04□□□□□ -0.48
TRAF4-215ENST00000584944 MAP1AP78559 2803 aaPredicted RBP12.03□□□□□ -0.48
TRAF4-215ENST00000584944 IGHV2OR16-5A0A0B4J2B6 119 aa12.03□□□□□ -0.48
TRAF4-215ENST00000584944 OR6C6A6NF89 314 aa12.03□□□□□ -0.48
TRAF4-215ENST00000584944 RER1O15258 196 aa12.03□□□□□ -0.48
TRAF4-215ENST00000584944 IGLV1-44P01699 117 aa12.03□□□□□ -0.48
TRAF4-215ENST00000584944 MMP7P09237 267 aaPredicted RBP12.03□□□□□ -0.48
TRAF4-215ENST00000584944 BMP4P12644 408 aa12.03□□□□□ -0.48
TRAF4-215ENST00000584944 ZNF14P17017 642 aaPredicted RBP12.03□□□□□ -0.48
TRAF4-215ENST00000584944 NAA10P41227 235 aaPredicted RBP12.03□□□□□ -0.48
TRAF4-215ENST00000584944 RAD52P43351 418 aa12.03□□□□□ -0.48
TRAF4-215ENST00000584944 ART1P52961 327 aa12.03□□□□□ -0.48
TRAF4-215ENST00000584944 SELENOVP59797 346 aa12.03□□□□□ -0.48
TRAF4-215ENST00000584944 SPOCK1Q08629 439 aa12.03□□□□□ -0.48
TRAF4-215ENST00000584944 DBPQ10586 325 aaPredicted RBP12.03□□□□□ -0.48
TRAF4-215ENST00000584944 POU4F2Q12837 409 aa12.03□□□□□ -0.48
TRAF4-215ENST00000584944 KEAP1Q14145 624 aa12.03□□□□□ -0.48
TRAF4-215ENST00000584944 EIF2B1Q14232 305 aaKnown RBP12.03□□□□□ -0.48
TRAF4-215ENST00000584944 ELFN2Q5R3F8 820 aa12.03□□□□□ -0.48
TRAF4-215ENST00000584944 KRT80Q6KB66 452 aa12.03□□□□□ -0.48
TRAF4-215ENST00000584944 SLC18B1Q6NT16 456 aa12.03□□□□□ -0.48
TRAF4-215ENST00000584944 MEPCEQ7L2J0 689 aaKnown RBP12.03□□□□□ -0.48
TRAF4-215ENST00000584944 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.03□□□□□ -0.48
TRAF4-215ENST00000584944 FBXL14Q8N1E6 418 aa12.03□□□□□ -0.48
TRAF4-215ENST00000584944 ZNF454Q8N9F8 522 aa12.03□□□□□ -0.48
TRAF4-215ENST00000584944 BBS1Q8NFJ9 593 aa12.03□□□□□ -0.48
TRAF4-215ENST00000584944 OR1F12Q8NHA8 337 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms