RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 IGKV1D-43A0A0B4J1Z2 117 aa13.44□□□□□ -0.26
SKA2-209ENST00000583976 POU1F1P28069 291 aa13.44□□□□□ -0.26
SKA2-209ENST00000583976 ARR3P36575 388 aa13.44□□□□□ -0.26
SKA2-209ENST00000583976 SRP14P37108 136 aaKnown RBP13.44□□□□□ -0.26
SKA2-209ENST00000583976 COX10Q12887 443 aa13.44□□□□□ -0.26
SKA2-209ENST00000583976 SLC36A3Q495N2 470 aa13.44□□□□□ -0.26
SKA2-209ENST00000583976 ELFN2Q5R3F8 820 aa13.44□□□□□ -0.26
SKA2-209ENST00000583976 GPR139Q6DWJ6 353 aa13.44□□□□□ -0.26
SKA2-209ENST00000583976 RPL13AP3Q6NVV1 102 aa13.44□□□□□ -0.26
SKA2-209ENST00000583976 CD300LDQ6UXZ3 194 aa13.44□□□□□ -0.26
SKA2-209ENST00000583976 ZNF813Q6ZN06 617 aa13.44□□□□□ -0.26
SKA2-209ENST00000583976 PTCHD4Q6ZW05 846 aa13.44□□□□□ -0.26
SKA2-209ENST00000583976 LINC01356Q8N9X3 169 aa13.44□□□□□ -0.26
SKA2-209ENST00000583976 ZNF540Q8NDQ6 660 aa13.44□□□□□ -0.26
SKA2-209ENST00000583976 OR4K13Q8NH42 304 aa13.44□□□□□ -0.26
SKA2-209ENST00000583976 UBASH3BQ8TF42 649 aa13.44□□□□□ -0.26
SKA2-209ENST00000583976 FOXB1Q99853 325 aa13.44□□□□□ -0.26
SKA2-209ENST00000583976 RERGLQ9H628 205 aa13.44□□□□□ -0.26
SKA2-209ENST00000583976 SMURF2Q9HAU4 748 aa13.44□□□□□ -0.26
SKA2-209ENST00000583976 ZNF224Q9NZL3 707 aa13.44□□□□□ -0.26
SKA2-209ENST00000583976 MYEF2Q9P2K5 600 aaKnown RBP13.44□□□□□ -0.26
SKA2-209ENST00000583976 REV1Q9UBZ9 1251 aa13.44□□□□□ -0.26
SKA2-209ENST00000583976 OAZ3Q9UMX2 235 aa13.44□□□□□ -0.26
SKA2-209ENST00000583976 PRSS37A4D1T9 235 aa13.43□□□□□ -0.26
SKA2-209ENST00000583976 CENPBD1B2RD01 187 aa13.43□□□□□ -0.26
SKA2-209ENST00000583976 BHLHE40O14503 412 aa13.43□□□□□ -0.26
SKA2-209ENST00000583976 WNT9BO14905 357 aa13.43□□□□□ -0.26
SKA2-209ENST00000583976 TCF21O43680 179 aa13.43□□□□□ -0.26
SKA2-209ENST00000583976 BAG2O95816 211 aa13.43□□□□□ -0.26
SKA2-209ENST00000583976 TXNDC12O95881 172 aa13.43□□□□□ -0.26
SKA2-209ENST00000583976 ERCC1P07992 297 aaPredicted RBP13.43□□□□□ -0.26
SKA2-209ENST00000583976 CD79AP11912 226 aa13.43□□□□□ -0.26
SKA2-209ENST00000583976 HIST1H1CP16403 213 aaKnown RBP13.43□□□□□ -0.26
SKA2-209ENST00000583976 CDAP32320 146 aa13.43□□□□□ -0.26
SKA2-209ENST00000583976 CDKN2AP42771 156 aaKnown RBP13.43□□□□□ -0.26
SKA2-209ENST00000583976 ALDH3B1P43353 468 aa13.43□□□□□ -0.26
SKA2-209ENST00000583976 ZNF84P51523 738 aa13.43□□□□□ -0.26
SKA2-209ENST00000583976 PIGFQ07326 219 aa13.43□□□□□ -0.26
SKA2-209ENST00000583976 DBPQ10586 325 aaPredicted RBP13.43□□□□□ -0.26
SKA2-209ENST00000583976 THEM4Q5T1C6 240 aa13.43□□□□□ -0.26
SKA2-209ENST00000583976 LEG1Q6P5S2 330 aa13.43□□□□□ -0.26
SKA2-209ENST00000583976 SLC25A47Q6Q0C1 308 aa13.43□□□□□ -0.26
SKA2-209ENST00000583976 LRP11Q86VZ4 500 aa13.43□□□□□ -0.26
SKA2-209ENST00000583976 JAZF1Q86VZ6 243 aa13.43□□□□□ -0.26
SKA2-209ENST00000583976 IQCF1Q8N6M8 205 aa13.43□□□□□ -0.26
SKA2-209ENST00000583976 OR52E2Q8NGJ4 325 aa13.43□□□□□ -0.26
SKA2-209ENST00000583976 OR4Q3Q8NH05 313 aa13.43□□□□□ -0.26
SKA2-209ENST00000583976 TEX47Q8TBZ9 253 aa13.43□□□□□ -0.26
SKA2-209ENST00000583976 MRPL24Q96A35 216 aaKnown RBP13.43□□□□□ -0.26
SKA2-209ENST00000583976 NMD3Q96D46 503 aaKnown RBP13.43□□□□□ -0.26
SKA2-209ENST00000583976 ZNF75AQ96N20 296 aa13.43□□□□□ -0.26
SKA2-209ENST00000583976 NMNAT3Q96T66 252 aa13.43□□□□□ -0.26
SKA2-209ENST00000583976 ALG12Q9BV10 488 aa13.43□□□□□ -0.26
SKA2-209ENST00000583976 LPAR2Q9HBW0 351 aa13.43□□□□□ -0.26
SKA2-209ENST00000583976 MOV10Q9HCE1 1003 aaKnown RBP13.43□□□□□ -0.26
SKA2-209ENST00000583976 B3GNT2Q9NY97 397 aa13.43□□□□□ -0.26
SKA2-209ENST00000583976 TMEFF2Q9UIK5 374 aaPredicted RBP13.43□□□□□ -0.26
SKA2-209ENST00000583976 SLC22A23A1A5C7 686 aa13.42□□□□□ -0.26
SKA2-209ENST00000583976 M0R233 179 aa13.42□□□□□ -0.26
SKA2-209ENST00000583976 ARPC3O15145 178 aa13.42□□□□□ -0.26
SKA2-209ENST00000583976 MITFO75030 526 aaPredicted RBP13.42□□□□□ -0.26
SKA2-209ENST00000583976 NCR1O76036 304 aa13.42□□□□□ -0.26
SKA2-209ENST00000583976 HPXP02790 462 aa13.42□□□□□ -0.26
SKA2-209ENST00000583976 NR2C1P13056 603 aa13.42□□□□□ -0.26
SKA2-209ENST00000583976 OSMP13725 252 aa13.42□□□□□ -0.26
SKA2-209ENST00000583976 HOXB1P14653 301 aaPredicted RBP13.42□□□□□ -0.26
SKA2-209ENST00000583976 ZNF14P17017 642 aaPredicted RBP13.42□□□□□ -0.26
SKA2-209ENST00000583976 NR4A1P22736 598 aa13.42□□□□□ -0.26
SKA2-209ENST00000583976 PAX7P23759 505 aa13.42□□□□□ -0.26
SKA2-209ENST00000583976 PTDSS1P48651 473 aaKnown RBP13.42□□□□□ -0.26
SKA2-209ENST00000583976 GSG1Q2KHT4 349 aa13.42□□□□□ -0.26
SKA2-209ENST00000583976 FAHD1Q6P587 224 aa13.42□□□□□ -0.26
SKA2-209ENST00000583976 RFLNBQ8N5W9 214 aa13.42□□□□□ -0.26
SKA2-209ENST00000583976 SDR9C7Q8NEX9 313 aa13.42□□□□□ -0.26
SKA2-209ENST00000583976 OR2T33Q8NG76 320 aa13.42□□□□□ -0.26
SKA2-209ENST00000583976 CLDND2Q8NHS1 167 aa13.42□□□□□ -0.26
SKA2-209ENST00000583976 HPS1Q92902 700 aa13.42□□□□□ -0.26
SKA2-209ENST00000583976 SYT4Q9H2B2 425 aa13.42□□□□□ -0.26
SKA2-209ENST00000583976 PAPOLBQ9NRJ5 636 aaKnown RBP13.42□□□□□ -0.26
SKA2-209ENST00000583976 CMAHPQ9Y471 501 aa13.42□□□□□ -0.26
SKA2-209ENST00000583976 A0A1W2PPL8 197 aa13.41□□□□□ -0.26
SKA2-209ENST00000583976 FAM157AC9JC47 383 aa13.41□□□□□ -0.26
SKA2-209ENST00000583976 IDH3BO43837 385 aa13.41□□□□□ -0.26
SKA2-209ENST00000583976 SLC16A7O60669 478 aa13.41□□□□□ -0.26
SKA2-209ENST00000583976 RGS9O75916 674 aaPredicted RBP13.41□□□□□ -0.26
SKA2-209ENST00000583976 PATE4P0C8F1 98 aa13.41□□□□□ -0.26
SKA2-209ENST00000583976 GIPRP48546 466 aa13.41□□□□□ -0.26
SKA2-209ENST00000583976 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.41□□□□□ -0.26
SKA2-209ENST00000583976 SGCAQ16586 387 aa13.41□□□□□ -0.26
SKA2-209ENST00000583976 ALKBH6Q3KRA9 238 aa13.41□□□□□ -0.26
SKA2-209ENST00000583976 C10orf128Q5T292 105 aa13.41□□□□□ -0.26
SKA2-209ENST00000583976 LIPNQ5VXI9 398 aa13.41□□□□□ -0.26
SKA2-209ENST00000583976 ADCK1Q86TW2 530 aa13.41□□□□□ -0.26
SKA2-209ENST00000583976 LRRC18Q8N456 261 aa13.41□□□□□ -0.26
SKA2-209ENST00000583976 SLC22A24Q8N4F4 322 aa13.41□□□□□ -0.26
SKA2-209ENST00000583976 FNDC8Q8TC99 324 aa13.41□□□□□ -0.26
SKA2-209ENST00000583976 YIPF5Q969M3 257 aa13.41□□□□□ -0.26
SKA2-209ENST00000583976 TSSK2Q96PF2 358 aa13.41□□□□□ -0.26
SKA2-209ENST00000583976 CIB1Q99828 191 aa13.41□□□□□ -0.26
SKA2-209ENST00000583976 SH3GL3Q99963 347 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms