RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 UBAP1Q9NZ09 502 aa6.6□□□□□ -1.35
SMCHD1-210ENST00000583800 U3KQE9 123 aa6.6□□□□□ -1.35
SMCHD1-210ENST00000583800 PKD1L1Q8TDX9 2849 aa6.6□□□□□ -1.35
SMCHD1-210ENST00000583800 TRBV5-3A0A0A0MS03 114 aa6.59□□□□□ -1.35
SMCHD1-210ENST00000583800 IQCMA0A1B0GVH7 501 aa6.59□□□□□ -1.35
SMCHD1-210ENST00000583800 PRORSD1PA6NEY8 169 aa6.59□□□□□ -1.35
SMCHD1-210ENST00000583800 ZSCAN5BA6NJL1 495 aa6.59□□□□□ -1.35
SMCHD1-210ENST00000583800 CHP2O43745 196 aa6.59□□□□□ -1.35
SMCHD1-210ENST00000583800 ENTPD5O75356 428 aa6.59□□□□□ -1.35
SMCHD1-210ENST00000583800 MFN2O95140 757 aa6.59□□□□□ -1.35
SMCHD1-210ENST00000583800 LYPD3O95274 346 aa6.59□□□□□ -1.35
SMCHD1-210ENST00000583800 IGHV3-13P01766 116 aa6.59□□□□□ -1.35
SMCHD1-210ENST00000583800 IGHG1P01857 330 aa6.59□□□□□ -1.35
SMCHD1-210ENST00000583800 MT-ND5P03915 603 aa6.59□□□□□ -1.35
SMCHD1-210ENST00000583800 ANXA2P07355 339 aaKnown RBP6.59□□□□□ -1.35
SMCHD1-210ENST00000583800 MMP7P09237 267 aaPredicted RBP6.59□□□□□ -1.35
SMCHD1-210ENST00000583800 HKR1P10072 659 aa6.59□□□□□ -1.35
SMCHD1-210ENST00000583800 UMPSP11172 480 aa6.59□□□□□ -1.35
SMCHD1-210ENST00000583800 FAHP16930 419 aa6.59□□□□□ -1.35
SMCHD1-210ENST00000583800 CCNOP22674 350 aa6.59□□□□□ -1.35
SMCHD1-210ENST00000583800 SLC6A2P23975 617 aa6.59□□□□□ -1.35
SMCHD1-210ENST00000583800 APLNRP35414 380 aa6.59□□□□□ -1.35
SMCHD1-210ENST00000583800 MPV17P39210 176 aa6.59□□□□□ -1.35
SMCHD1-210ENST00000583800 ZNF81P51508 661 aa6.59□□□□□ -1.35
SMCHD1-210ENST00000583800 CLRN1P58418 232 aa6.59□□□□□ -1.35
SMCHD1-210ENST00000583800 STX1BP61266 288 aa6.59□□□□□ -1.35
SMCHD1-210ENST00000583800 HSF2Q03933 536 aa6.59□□□□□ -1.35
SMCHD1-210ENST00000583800 EGR3Q06889 387 aa6.59□□□□□ -1.35
SMCHD1-210ENST00000583800 DBPQ10586 325 aaPredicted RBP6.59□□□□□ -1.35
SMCHD1-210ENST00000583800 FOXL1Q12952 345 aa6.59□□□□□ -1.35
SMCHD1-210ENST00000583800 TIGD6Q17RP2 521 aa6.59□□□□□ -1.35
SMCHD1-210ENST00000583800 SPRNQ5BIV9 151 aa6.59□□□□□ -1.35
SMCHD1-210ENST00000583800 ENTPD8Q5MY95 495 aa6.59□□□□□ -1.35
SMCHD1-210ENST00000583800 LIN54Q6MZP7 749 aa6.59□□□□□ -1.35
SMCHD1-210ENST00000583800 ZNF613Q6PF04 617 aa6.59□□□□□ -1.35
SMCHD1-210ENST00000583800 ARMC8Q8IUR7 673 aa6.59□□□□□ -1.35
SMCHD1-210ENST00000583800 FUNDC1Q8IVP5 155 aa6.59□□□□□ -1.35
SMCHD1-210ENST00000583800 ZNF101Q8IZC7 436 aa6.59□□□□□ -1.35
SMCHD1-210ENST00000583800 SIGLECL1Q8N7X8 197 aa6.59□□□□□ -1.35
SMCHD1-210ENST00000583800 CPEB3Q8NE35 698 aaKnown RBP6.59□□□□□ -1.35
SMCHD1-210ENST00000583800 NOXO1Q8NFA2 376 aa6.59□□□□□ -1.35
SMCHD1-210ENST00000583800 GPR32P1Q8NGA4 272 aa6.59□□□□□ -1.35
SMCHD1-210ENST00000583800 OR4D11Q8NGI4 311 aa6.59□□□□□ -1.35
SMCHD1-210ENST00000583800 OR6T1Q8NGN1 323 aa6.59□□□□□ -1.35
SMCHD1-210ENST00000583800 OR1J2Q8NGS2 313 aa6.59□□□□□ -1.35
SMCHD1-210ENST00000583800 VANGL1Q8TAA9 524 aaPredicted RBP6.59□□□□□ -1.35
SMCHD1-210ENST00000583800 GEMIN6Q8WXD5 167 aaKnown RBP6.59□□□□□ -1.35
SMCHD1-210ENST00000583800 CCL17Q92583 94 aa6.59□□□□□ -1.35
SMCHD1-210ENST00000583800 TAF15Q92804 592 aaKnown RBP eCLIP6.59□□□□□ -1.35
SMCHD1-210ENST00000583800 RAB1CQ92928 201 aa6.59□□□□□ -1.35
SMCHD1-210ENST00000583800 DVL3Q92997 716 aaPredicted RBP6.59□□□□□ -1.35
SMCHD1-210ENST00000583800 MCHR2Q969V1 340 aa6.59□□□□□ -1.35
SMCHD1-210ENST00000583800 SPDL1Q96EA4 605 aa6.59□□□□□ -1.35
SMCHD1-210ENST00000583800 ELMOD3Q96FG2 381 aa6.59□□□□□ -1.35
SMCHD1-210ENST00000583800 SNX22Q96L94 193 aa6.59□□□□□ -1.35
SMCHD1-210ENST00000583800 C1orf147Q96MC9 270 aaPredicted RBP6.59□□□□□ -1.35
SMCHD1-210ENST00000583800 ZNF607Q96SK3 696 aa6.59□□□□□ -1.35
SMCHD1-210ENST00000583800 ARHGDIGQ99819 225 aa6.59□□□□□ -1.35
SMCHD1-210ENST00000583800 TMEM38AQ9H6F2 299 aa6.59□□□□□ -1.35
SMCHD1-210ENST00000583800 ZNF696Q9H7X3 374 aa6.59□□□□□ -1.35
SMCHD1-210ENST00000583800 NTN4Q9HB63 628 aa6.59□□□□□ -1.35
SMCHD1-210ENST00000583800 SLCO1B3Q9NPD5 702 aa6.59□□□□□ -1.35
SMCHD1-210ENST00000583800 NANSQ9NR45 359 aa6.59□□□□□ -1.35
SMCHD1-210ENST00000583800 DCAF16Q9NXF7 216 aa6.59□□□□□ -1.35
SMCHD1-210ENST00000583800 CCDC167Q9P0B6 97 aa6.59□□□□□ -1.35
SMCHD1-210ENST00000583800 KIF17Q9P2E2 1029 aa6.59□□□□□ -1.35
SMCHD1-210ENST00000583800 LEF1Q9UJU2 399 aaPredicted RBP6.59□□□□□ -1.35
SMCHD1-210ENST00000583800 ANGPT4Q9Y264 503 aa6.59□□□□□ -1.35
SMCHD1-210ENST00000583800 USH1CQ9Y6N9 552 aa6.59□□□□□ -1.35
SMCHD1-210ENST00000583800 DNAJC9-AS1A6NH13 148 aa6.58□□□□□ -1.36
SMCHD1-210ENST00000583800 FMO6PO60774 539 aa6.58□□□□□ -1.36
SMCHD1-210ENST00000583800 SERPINB7O75635 380 aa6.58□□□□□ -1.36
SMCHD1-210ENST00000583800 SLC2A10O95528 541 aa6.58□□□□□ -1.36
SMCHD1-210ENST00000583800 PTHP01270 115 aa6.58□□□□□ -1.36
SMCHD1-210ENST00000583800 ASAH2BP0C7U1 165 aa6.58□□□□□ -1.36
SMCHD1-210ENST00000583800 GPX2P18283 190 aa6.58□□□□□ -1.36
SMCHD1-210ENST00000583800 MALP21145 153 aa6.58□□□□□ -1.36
SMCHD1-210ENST00000583800 PPIBP23284 216 aaKnown RBP6.58□□□□□ -1.36
SMCHD1-210ENST00000583800 GATA3P23771 443 aa6.58□□□□□ -1.36
SMCHD1-210ENST00000583800 ZFP36P26651 326 aaKnown RBP6.58□□□□□ -1.36
SMCHD1-210ENST00000583800 CDAP32320 146 aa6.58□□□□□ -1.36
SMCHD1-210ENST00000583800 WNT5AP41221 380 aa6.58□□□□□ -1.36
SMCHD1-210ENST00000583800 MMP15P51511 669 aa6.58□□□□□ -1.36
SMCHD1-210ENST00000583800 ZNF84P51523 738 aa6.58□□□□□ -1.36
SMCHD1-210ENST00000583800 RPS16P62249 146 aaKnown RBP6.58□□□□□ -1.36
SMCHD1-210ENST00000583800 DEFA6Q01524 100 aa6.58□□□□□ -1.36
SMCHD1-210ENST00000583800 PLP2Q04941 152 aa6.58□□□□□ -1.36
SMCHD1-210ENST00000583800 HIST3H3Q16695 136 aa6.58□□□□□ -1.36
SMCHD1-210ENST00000583800 DUSP7Q16829 419 aa6.58□□□□□ -1.36
SMCHD1-210ENST00000583800 PDLIM3Q53GG5 364 aaPredicted RBP6.58□□□□□ -1.36
SMCHD1-210ENST00000583800 ARMCX4Q5H9R4 360 aa6.58□□□□□ -1.36
SMCHD1-210ENST00000583800 PABPC1L2AQ5JQF8 200 aa6.58□□□□□ -1.36
SMCHD1-210ENST00000583800 KHDC1LQ5JSQ8 128 aa6.58□□□□□ -1.36
SMCHD1-210ENST00000583800 THEM4Q5T1C6 240 aa6.58□□□□□ -1.36
SMCHD1-210ENST00000583800 TTC33Q6PID6 262 aaPredicted RBP6.58□□□□□ -1.36
SMCHD1-210ENST00000583800 EPGNQ6UW88 154 aa6.58□□□□□ -1.36
SMCHD1-210ENST00000583800 RFPL4BQ6ZWI9 263 aa6.58□□□□□ -1.36
SMCHD1-210ENST00000583800 NANOGNBQ7Z5D8 188 aa6.58□□□□□ -1.36
SMCHD1-210ENST00000583800 DPPA2Q7Z7J5 298 aa6.58□□□□□ -1.36
SMCHD1-210ENST00000583800 PTOV1Q86YD1 416 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms