RNA–Protein interactions for RNA: ENST00000583667.1

GGA3-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-217ENST00000583667 VBP1P61758 197 aa10.55□□□□□ -0.72
GGA3-217ENST00000583667 SIRPAP78324 504 aa10.55□□□□□ -0.72
GGA3-217ENST00000583667 DBPQ10586 325 aaPredicted RBP10.55□□□□□ -0.72
GGA3-217ENST00000583667 STK11Q15831 433 aa10.55□□□□□ -0.72
GGA3-217ENST00000583667 DGUOKQ16854 277 aa10.55□□□□□ -0.72
GGA3-217ENST00000583667 SLC18B1Q6NT16 456 aa10.55□□□□□ -0.72
GGA3-217ENST00000583667 LRFN4Q6PJG9 635 aa10.55□□□□□ -0.72
GGA3-217ENST00000583667 CLEC9AQ6UXN8 241 aa10.55□□□□□ -0.72
GGA3-217ENST00000583667 TRILQ7L0X0 811 aa10.55□□□□□ -0.72
GGA3-217ENST00000583667 GPAT4Q86UL3 456 aa10.55□□□□□ -0.72
GGA3-217ENST00000583667 GHDCQ8N2G8 530 aa10.55□□□□□ -0.72
GGA3-217ENST00000583667 SYT14Q8NB59 555 aa10.55□□□□□ -0.72
GGA3-217ENST00000583667 PHYHIPQ92561 330 aa10.55□□□□□ -0.72
GGA3-217ENST00000583667 ABTB1Q969K4 478 aaPredicted RBP10.55□□□□□ -0.72
GGA3-217ENST00000583667 TMEM45BQ96B21 275 aa10.55□□□□□ -0.72
GGA3-217ENST00000583667 OR2M2Q96R28 347 aa10.55□□□□□ -0.72
GGA3-217ENST00000583667 TAAR6Q96RI8 345 aa10.55□□□□□ -0.72
GGA3-217ENST00000583667 UCN2Q96RP3 112 aa10.55□□□□□ -0.72
GGA3-217ENST00000583667 TBX5Q99593 518 aa10.55□□□□□ -0.72
GGA3-217ENST00000583667 CHCHD6Q9BRQ6 235 aa10.55□□□□□ -0.72
GGA3-217ENST00000583667 CENPOQ9BU64 300 aa10.55□□□□□ -0.72
GGA3-217ENST00000583667 MED18Q9BUE0 208 aa10.55□□□□□ -0.72
GGA3-217ENST00000583667 EMC6Q9BV81 110 aa10.55□□□□□ -0.72
GGA3-217ENST00000583667 NXF2Q9GZY0 626 aaKnown RBP10.55□□□□□ -0.72
GGA3-217ENST00000583667 DCSTAMPQ9H295 470 aa10.55□□□□□ -0.72
GGA3-217ENST00000583667 GP6Q9HCN6 339 aa10.55□□□□□ -0.72
GGA3-217ENST00000583667 LAMP5Q9UJQ1 280 aa10.55□□□□□ -0.72
GGA3-217ENST00000583667 FOXD3Q9UJU5 478 aaPredicted RBP10.55□□□□□ -0.72
GGA3-217ENST00000583667 GSTK1Q9Y2Q3 226 aa10.55□□□□□ -0.72
GGA3-217ENST00000583667 SIRT4Q9Y6E7 314 aaPredicted RBP10.55□□□□□ -0.72
GGA3-217ENST00000583667 NCOA6Q14686 2063 aaPredicted RBP10.54□□□□□ -0.72
GGA3-217ENST00000583667 TVP23AA6NH52 213 aa10.54□□□□□ -0.72
GGA3-217ENST00000583667 E9PI62 339 aa10.54□□□□□ -0.72
GGA3-217ENST00000583667 NPIPA2E9PIF3 369 aa10.54□□□□□ -0.72
GGA3-217ENST00000583667 NPIPA3F8WFD2 350 aa10.54□□□□□ -0.72
GGA3-217ENST00000583667 GPR171O14626 319 aa10.54□□□□□ -0.72
GGA3-217ENST00000583667 TMCC2O75069 709 aa10.54□□□□□ -0.72
GGA3-217ENST00000583667 ZNF254O75437 659 aa10.54□□□□□ -0.72
GGA3-217ENST00000583667 UPK3AO75631 287 aa10.54□□□□□ -0.72
GGA3-217ENST00000583667 SC5DO75845 299 aa10.54□□□□□ -0.72
GGA3-217ENST00000583667 IL1AP01583 271 aa10.54□□□□□ -0.72
GGA3-217ENST00000583667 CELA3AP09093 270 aa10.54□□□□□ -0.72
GGA3-217ENST00000583667 NR4A1P22736 598 aa10.54□□□□□ -0.72
GGA3-217ENST00000583667 DCTDP32321 178 aa10.54□□□□□ -0.72
GGA3-217ENST00000583667 CLDN17P56750 224 aa10.54□□□□□ -0.72
GGA3-217ENST00000583667 CLRN1P58418 232 aa10.54□□□□□ -0.72
GGA3-217ENST00000583667 ETFDHQ16134 617 aa10.54□□□□□ -0.72
GGA3-217ENST00000583667 RNFT1Q5M7Z0 435 aa10.54□□□□□ -0.72
GGA3-217ENST00000583667 RIPPLY2Q5TAB7 128 aa10.54□□□□□ -0.72
GGA3-217ENST00000583667 KCTD18Q6PI47 426 aaPredicted RBP10.54□□□□□ -0.72
GGA3-217ENST00000583667 LYPD4Q6UWN0 246 aa10.54□□□□□ -0.72
GGA3-217ENST00000583667 DPY19L4Q7Z388 723 aa10.54□□□□□ -0.72
GGA3-217ENST00000583667 TMEM200AQ86VY9 491 aa10.54□□□□□ -0.72
GGA3-217ENST00000583667 C20orf196Q8IYI0 205 aa10.54□□□□□ -0.72
GGA3-217ENST00000583667 NDNFQ8TB73 568 aa10.54□□□□□ -0.72
GGA3-217ENST00000583667 SMAP2Q8WU79 429 aaPredicted RBP10.54□□□□□ -0.72
GGA3-217ENST00000583667 MCHR2Q969V1 340 aa10.54□□□□□ -0.72
GGA3-217ENST00000583667 RNF166Q96A37 237 aaPredicted RBP10.54□□□□□ -0.72
GGA3-217ENST00000583667 C18orf12Q96KH6 178 aa10.54□□□□□ -0.72
GGA3-217ENST00000583667 OR8B4Q96RC9 309 aa10.54□□□□□ -0.72
GGA3-217ENST00000583667 TTYH2Q9BSA4 534 aa10.54□□□□□ -0.72
GGA3-217ENST00000583667 DCUN1D5Q9BTE7 237 aa10.54□□□□□ -0.72
GGA3-217ENST00000583667 TXNL4BQ9NX01 149 aaKnown RBP10.54□□□□□ -0.72
GGA3-217ENST00000583667 GLTPQ9NZD2 209 aa10.54□□□□□ -0.72
GGA3-217ENST00000583667 CCDC59Q9P031 241 aaKnown RBP10.54□□□□□ -0.72
GGA3-217ENST00000583667 MRM2Q9UI43 246 aaKnown RBP10.54□□□□□ -0.72
GGA3-217ENST00000583667 ING1Q9UK53 422 aaPredicted RBP10.54□□□□□ -0.72
GGA3-217ENST00000583667 FLVCR1Q9Y5Y0 555 aa10.54□□□□□ -0.72
GGA3-217ENST00000583667 CACNA1CQ13936 2221 aa10.54□□□□□ -0.72
GGA3-217ENST00000583667 TRGV5A0A0B4J1U4 118 aa10.53□□□□□ -0.72
GGA3-217ENST00000583667 IGKV1D-43A0A0B4J1Z2 117 aa10.53□□□□□ -0.72
GGA3-217ENST00000583667 FAM166BA8MTA8 275 aa10.53□□□□□ -0.72
GGA3-217ENST00000583667 ZNF724A8MTY0 619 aa10.53□□□□□ -0.72
GGA3-217ENST00000583667 H0YC42 278 aa10.53□□□□□ -0.72
GGA3-217ENST00000583667 CLPXO76031 633 aa10.53□□□□□ -0.72
GGA3-217ENST00000583667 SERPINA3P01011 423 aa10.53□□□□□ -0.72
GGA3-217ENST00000583667 KRT8P05787 483 aa10.53□□□□□ -0.72
GGA3-217ENST00000583667 HEXAP06865 529 aa10.53□□□□□ -0.72
GGA3-217ENST00000583667 ZNF823P16415 610 aa10.53□□□□□ -0.72
GGA3-217ENST00000583667 EIF1AXP47813 144 aaKnown RBP10.53□□□□□ -0.72
GGA3-217ENST00000583667 SERPINB10P48595 397 aa10.53□□□□□ -0.72
GGA3-217ENST00000583667 CSNK1A1P48729 337 aa10.53□□□□□ -0.72
GGA3-217ENST00000583667 CCR9P51686 369 aa10.53□□□□□ -0.72
GGA3-217ENST00000583667 LSM3P62310 102 aaKnown RBP10.53□□□□□ -0.72
GGA3-217ENST00000583667 LSM6P62312 80 aaKnown RBP10.53□□□□□ -0.72
GGA3-217ENST00000583667 RPS25P62851 125 aaKnown RBP10.53□□□□□ -0.72
GGA3-217ENST00000583667 FABP5Q01469 135 aa10.53□□□□□ -0.72
GGA3-217ENST00000583667 CAMK2DQ13557 499 aa10.53□□□□□ -0.72
GGA3-217ENST00000583667 CDK5R1Q15078 307 aa10.53□□□□□ -0.72
GGA3-217ENST00000583667 TP53I3Q53FA7 332 aa10.53□□□□□ -0.72
GGA3-217ENST00000583667 LIPNQ5VXI9 398 aa10.53□□□□□ -0.72
GGA3-217ENST00000583667 PAMR1Q6UXH9 720 aa10.53□□□□□ -0.72
GGA3-217ENST00000583667 UNQ9370/PRO34162Q6UXP9 181 aa10.53□□□□□ -0.72
GGA3-217ENST00000583667 TMEM91Q6ZNR0 172 aa10.53□□□□□ -0.72
GGA3-217ENST00000583667 FCRLAQ7L513 359 aa10.53□□□□□ -0.72
GGA3-217ENST00000583667 ZNF679Q8IYX0 411 aa10.53□□□□□ -0.72
GGA3-217ENST00000583667 RFLNBQ8N5W9 214 aa10.53□□□□□ -0.72
GGA3-217ENST00000583667 OR6N2Q8NGY6 317 aa10.53□□□□□ -0.72
GGA3-217ENST00000583667 RNF128Q8TEB7 428 aa10.53□□□□□ -0.72
GGA3-217ENST00000583667 SMIM19Q96E16 107 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms