RNA–Protein interactions for RNA: ENST00000583182.5

CDK5RAP3-226, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 709 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-226ENST00000583182 KITLGP21583 273 aa12.38□□□□□ -0.43
CDK5RAP3-226ENST00000583182 TNFSF4P23510 183 aa12.38□□□□□ -0.43
CDK5RAP3-226ENST00000583182 RBM34P42696 430 aaKnown RBP12.38□□□□□ -0.43
CDK5RAP3-226ENST00000583182 KIR3DL3Q8N743 410 aa12.38□□□□□ -0.43
CDK5RAP3-226ENST00000583182 POU5F2Q8N7G0 328 aa12.38□□□□□ -0.43
CDK5RAP3-226ENST00000583182 SLC26A7Q8TE54 656 aa12.38□□□□□ -0.43
CDK5RAP3-226ENST00000583182 TMEM239Q8WW34 195 aa12.38□□□□□ -0.43
CDK5RAP3-226ENST00000583182 DACT3Q96B18 629 aaPredicted RBP12.38□□□□□ -0.43
CDK5RAP3-226ENST00000583182 C7orf26Q96N11 449 aa12.38□□□□□ -0.43
CDK5RAP3-226ENST00000583182 CGREF1Q99674 301 aa12.38□□□□□ -0.43
CDK5RAP3-226ENST00000583182 ALG12Q9BV10 488 aa12.38□□□□□ -0.43
CDK5RAP3-226ENST00000583182 SSBP3Q9BWW4 388 aaPredicted RBP12.38□□□□□ -0.43
CDK5RAP3-226ENST00000583182 KAT8Q9H7Z6 458 aaKnown RBP12.38□□□□□ -0.43
CDK5RAP3-226ENST00000583182 MAN2C1Q9NTJ4 1040 aa12.38□□□□□ -0.43
CDK5RAP3-226ENST00000583182 IL19Q9UHD0 177 aa12.38□□□□□ -0.43
CDK5RAP3-226ENST00000583182 IL20RAQ9UHF4 553 aa12.38□□□□□ -0.43
CDK5RAP3-226ENST00000583182 RAB21Q9UL25 225 aa12.38□□□□□ -0.43
CDK5RAP3-226ENST00000583182 LRCH1Q9Y2L9 728 aa12.38□□□□□ -0.43
CDK5RAP3-226ENST00000583182 GMNCA6NCL1 334 aa12.37□□□□□ -0.43
CDK5RAP3-226ENST00000583182 FAM181BA6NEQ2 426 aa12.37□□□□□ -0.43
CDK5RAP3-226ENST00000583182 PIP5K1CO60331 668 aa12.37□□□□□ -0.43
CDK5RAP3-226ENST00000583182 SHOX2O60902 331 aaPredicted RBP12.37□□□□□ -0.43
CDK5RAP3-226ENST00000583182 ZNF205O95201 554 aa12.37□□□□□ -0.43
CDK5RAP3-226ENST00000583182 KNG1P01042 644 aa12.37□□□□□ -0.43
CDK5RAP3-226ENST00000583182 NR2C1P13056 603 aa12.37□□□□□ -0.43
CDK5RAP3-226ENST00000583182 GSTM3P21266 225 aa12.37□□□□□ -0.43
CDK5RAP3-226ENST00000583182 ERFP50548 548 aa12.37□□□□□ -0.43
CDK5RAP3-226ENST00000583182 MMP16P51512 607 aa12.37□□□□□ -0.43
CDK5RAP3-226ENST00000583182 TAS2R41P59536 307 aa12.37□□□□□ -0.43
CDK5RAP3-226ENST00000583182 PCBD1P61457 104 aa12.37□□□□□ -0.43
CDK5RAP3-226ENST00000583182 DEFB112Q30KQ8 113 aa12.37□□□□□ -0.43
CDK5RAP3-226ENST00000583182 ALG10Q5BKT4 473 aa12.37□□□□□ -0.43
CDK5RAP3-226ENST00000583182 LRRN1Q6UXK5 716 aa12.37□□□□□ -0.43
CDK5RAP3-226ENST00000583182 SLC30A8Q8IWU4 369 aa12.37□□□□□ -0.43
CDK5RAP3-226ENST00000583182 MUC20Q8N307 709 aaPredicted RBP12.37□□□□□ -0.43
CDK5RAP3-226ENST00000583182 DPP10Q8N608 796 aa12.37□□□□□ -0.43
CDK5RAP3-226ENST00000583182 NPEPL1Q8NDH3 523 aa12.37□□□□□ -0.43
CDK5RAP3-226ENST00000583182 TLCD1Q96CP7 247 aa12.37□□□□□ -0.43
CDK5RAP3-226ENST00000583182 CMBLQ96DG6 245 aa12.37□□□□□ -0.43
CDK5RAP3-226ENST00000583182 RBP7Q96R05 134 aa12.37□□□□□ -0.43
CDK5RAP3-226ENST00000583182 OR2V2Q96R30 315 aa12.37□□□□□ -0.43
CDK5RAP3-226ENST00000583182 GCM1Q9NP62 436 aa12.37□□□□□ -0.43
CDK5RAP3-226ENST00000583182 TBCCD1Q9NVR7 557 aa12.37□□□□□ -0.43
CDK5RAP3-226ENST00000583182 RIMS3Q9UJD0 308 aa12.37□□□□□ -0.43
CDK5RAP3-226ENST00000583182 NDRG4Q9ULP0 352 aaKnown RBP12.37□□□□□ -0.43
CDK5RAP3-226ENST00000583182 HIF3AQ9Y2N7 669 aa12.37□□□□□ -0.43
CDK5RAP3-226ENST00000583182 SH3GLB1Q9Y371 365 aa12.37□□□□□ -0.43
CDK5RAP3-226ENST00000583182 IGHV2-70DA0A0C4DH43 119 aa12.36□□□□□ -0.43
CDK5RAP3-226ENST00000583182 A0A1W2PPL8 197 aa12.36□□□□□ -0.43
CDK5RAP3-226ENST00000583182 THRBP10828 461 aa12.36□□□□□ -0.43
CDK5RAP3-226ENST00000583182 RPS2P15880 293 aaKnown RBP12.36□□□□□ -0.43
CDK5RAP3-226ENST00000583182 MSR1P21757 451 aa12.36□□□□□ -0.43
CDK5RAP3-226ENST00000583182 GZMMP51124 257 aa12.36□□□□□ -0.43
CDK5RAP3-226ENST00000583182 RPL27P61353 136 aaKnown RBP12.36□□□□□ -0.43
CDK5RAP3-226ENST00000583182 RELBQ01201 579 aa12.36□□□□□ -0.43
CDK5RAP3-226ENST00000583182 PIN1Q13526 163 aaPredicted RBP12.36□□□□□ -0.43
CDK5RAP3-226ENST00000583182 ARL9Q6T311 187 aa12.36□□□□□ -0.43
CDK5RAP3-226ENST00000583182 BTNL3Q6UXE8 466 aa12.36□□□□□ -0.43
CDK5RAP3-226ENST00000583182 BRD3OSQ6XYD6 125 aa12.36□□□□□ -0.43
CDK5RAP3-226ENST00000583182 SYT9Q86SS6 491 aa12.36□□□□□ -0.43
CDK5RAP3-226ENST00000583182 IGFN1Q86VF2 1251 aa12.36□□□□□ -0.43
CDK5RAP3-226ENST00000583182 KLBQ86Z14 1044 aa12.36□□□□□ -0.43
CDK5RAP3-226ENST00000583182 OR10A6Q8NH74 314 aa12.36□□□□□ -0.43
CDK5RAP3-226ENST00000583182 ZNF420Q8TAQ5 688 aaPredicted RBP12.36□□□□□ -0.43
CDK5RAP3-226ENST00000583182 RAB40AQ8WXH6 277 aa12.36□□□□□ -0.43
CDK5RAP3-226ENST00000583182 THOC1Q96FV9 657 aaKnown RBP12.36□□□□□ -0.43
CDK5RAP3-226ENST00000583182 PRDM13Q9H4Q3 707 aa12.36□□□□□ -0.43
CDK5RAP3-226ENST00000583182 TMEM165Q9HC07 324 aa12.36□□□□□ -0.43
CDK5RAP3-226ENST00000583182 EMC7Q9NPA0 242 aa12.36□□□□□ -0.43
CDK5RAP3-226ENST00000583182 POLE4Q9NR33 117 aa12.36□□□□□ -0.43
CDK5RAP3-226ENST00000583182 STARD10Q9Y365 291 aa12.36□□□□□ -0.43
CDK5RAP3-226ENST00000583182 NDUFAF1Q9Y375 327 aa12.36□□□□□ -0.43
CDK5RAP3-226ENST00000583182 MED31Q9Y3C7 131 aa12.36□□□□□ -0.43
CDK5RAP3-226ENST00000583182 C12orf71A8MTZ7 269 aa12.35□□□□□ -0.43
CDK5RAP3-226ENST00000583182 SRRM5B3KS81 715 aa12.35□□□□□ -0.43
CDK5RAP3-226ENST00000583182 SURF4O15260 269 aa12.35□□□□□ -0.43
CDK5RAP3-226ENST00000583182 OR5F1O95221 314 aa12.35□□□□□ -0.43
CDK5RAP3-226ENST00000583182 VIMP08670 466 aaKnown RBP12.35□□□□□ -0.43
CDK5RAP3-226ENST00000583182 COX5BP10606 129 aa12.35□□□□□ -0.43
CDK5RAP3-226ENST00000583182 RAG2P55895 527 aa12.35□□□□□ -0.43
CDK5RAP3-226ENST00000583182 GNB2P62879 340 aa12.35□□□□□ -0.43
CDK5RAP3-226ENST00000583182 VMACQ2NL98 169 aa12.35□□□□□ -0.43
CDK5RAP3-226ENST00000583182 INTS11Q5TA45 600 aaKnown RBP12.35□□□□□ -0.43
CDK5RAP3-226ENST00000583182 C17orf107Q6ZR85 190 aa12.35□□□□□ -0.43
CDK5RAP3-226ENST00000583182 CCDC80Q76M96 950 aa12.35□□□□□ -0.43
CDK5RAP3-226ENST00000583182 RHOUQ7L0Q8 258 aa12.35□□□□□ -0.43
CDK5RAP3-226ENST00000583182 LRRC75AQ8NAA5 344 aa12.35□□□□□ -0.43
CDK5RAP3-226ENST00000583182 OR10S1Q8NGN2 331 aa12.35□□□□□ -0.43
CDK5RAP3-226ENST00000583182 FNDC8Q8TC99 324 aa12.35□□□□□ -0.43
CDK5RAP3-226ENST00000583182 RASSF5Q8WWW0 418 aa12.35□□□□□ -0.43
CDK5RAP3-226ENST00000583182 HAVCR1Q96D42 359 aa12.35□□□□□ -0.43
CDK5RAP3-226ENST00000583182 CITED1Q99966 193 aa12.35□□□□□ -0.43
CDK5RAP3-226ENST00000583182 TNFRSF19Q9NS68 423 aa12.35□□□□□ -0.43
CDK5RAP3-226ENST00000583182 C1RLQ9NZP8 487 aa12.35□□□□□ -0.43
CDK5RAP3-226ENST00000583182 ARMCX1Q9P291 453 aa12.35□□□□□ -0.43
CDK5RAP3-226ENST00000583182 KIR2DS1A0A191URI9 304 aa12.34□□□□□ -0.43
CDK5RAP3-226ENST00000583182 A0A1B0GUS0 222 aa12.34□□□□□ -0.43
CDK5RAP3-226ENST00000583182 DOK2O60496 412 aa12.34□□□□□ -0.43
CDK5RAP3-226ENST00000583182 CYB5R3P00387 301 aaPredicted RBP12.34□□□□□ -0.43
CDK5RAP3-226ENST00000583182 TUBG1P23258 451 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms