RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 UPRTQ96BW1 309 aa13.54□□□□□ -0.24
SREBF1-221ENST00000583080 OR2V2Q96R30 315 aa13.54□□□□□ -0.24
SREBF1-221ENST00000583080 ALG12Q9BV10 488 aa13.54□□□□□ -0.24
SREBF1-221ENST00000583080 KAT8Q9H7Z6 458 aaKnown RBP13.54□□□□□ -0.24
SREBF1-221ENST00000583080 RAB21Q9UL25 225 aa13.54□□□□□ -0.24
SREBF1-221ENST00000583080 PPP1R3CQ9UQK1 317 aa13.54□□□□□ -0.24
SREBF1-221ENST00000583080 LRCH1Q9Y2L9 728 aa13.54□□□□□ -0.24
SREBF1-221ENST00000583080 TIMM10BQ9Y5J6 103 aa13.54□□□□□ -0.24
SREBF1-221ENST00000583080 GMNCA6NCL1 334 aa13.53□□□□□ -0.24
SREBF1-221ENST00000583080 TMEM178BH3BS89 294 aa13.53□□□□□ -0.24
SREBF1-221ENST00000583080 HOXA3O43365 443 aaPredicted RBP13.53□□□□□ -0.24
SREBF1-221ENST00000583080 THRBP10828 461 aa13.53□□□□□ -0.24
SREBF1-221ENST00000583080 GSTM3P21266 225 aa13.53□□□□□ -0.24
SREBF1-221ENST00000583080 KITLGP21583 273 aa13.53□□□□□ -0.24
SREBF1-221ENST00000583080 TNFSF4P23510 183 aa13.53□□□□□ -0.24
SREBF1-221ENST00000583080 ALG10Q5BKT4 473 aa13.53□□□□□ -0.24
SREBF1-221ENST00000583080 C16orf87Q6PH81 154 aa13.53□□□□□ -0.24
SREBF1-221ENST00000583080 ZER1Q7Z7L7 766 aa13.53□□□□□ -0.24
SREBF1-221ENST00000583080 IGFN1Q86VF2 1251 aa13.53□□□□□ -0.24
SREBF1-221ENST00000583080 DPP10Q8N608 796 aa13.53□□□□□ -0.24
SREBF1-221ENST00000583080 POU5F2Q8N7G0 328 aa13.53□□□□□ -0.24
SREBF1-221ENST00000583080 OR10A6Q8NH74 314 aa13.53□□□□□ -0.24
SREBF1-221ENST00000583080 LIPHQ8WWY8 451 aa13.53□□□□□ -0.24
SREBF1-221ENST00000583080 THOC1Q96FV9 657 aaKnown RBP13.53□□□□□ -0.24
SREBF1-221ENST00000583080 SSBP3Q9BWW4 388 aaPredicted RBP13.53□□□□□ -0.24
SREBF1-221ENST00000583080 EMC7Q9NPA0 242 aa13.53□□□□□ -0.24
SREBF1-221ENST00000583080 TNFRSF19Q9NS68 423 aa13.53□□□□□ -0.24
SREBF1-221ENST00000583080 SH3GLB1Q9Y371 365 aa13.53□□□□□ -0.24
SREBF1-221ENST00000583080 MMP24Q9Y5R2 645 aa13.53□□□□□ -0.24
SREBF1-221ENST00000583080 IGHV2-70DA0A0C4DH43 119 aa13.52□□□□□ -0.25
SREBF1-221ENST00000583080 H7C1C5 153 aa13.52□□□□□ -0.25
SREBF1-221ENST00000583080 OR5F1O95221 314 aa13.52□□□□□ -0.25
SREBF1-221ENST00000583080 IGF2P01344 180 aa13.52□□□□□ -0.25
SREBF1-221ENST00000583080 WNT2P09544 360 aa13.52□□□□□ -0.25
SREBF1-221ENST00000583080 PPIAL4GP0DN37 164 aa13.52□□□□□ -0.25
SREBF1-221ENST00000583080 NR2C1P13056 603 aa13.52□□□□□ -0.25
SREBF1-221ENST00000583080 RPS2P15880 293 aaKnown RBP13.52□□□□□ -0.25
SREBF1-221ENST00000583080 MSR1P21757 451 aa13.52□□□□□ -0.25
SREBF1-221ENST00000583080 GZMMP51124 257 aa13.52□□□□□ -0.25
SREBF1-221ENST00000583080 RPL27P61353 136 aaKnown RBP13.52□□□□□ -0.25
SREBF1-221ENST00000583080 PCBD1P61457 104 aa13.52□□□□□ -0.25
SREBF1-221ENST00000583080 LCN6P62502 163 aa13.52□□□□□ -0.25
SREBF1-221ENST00000583080 PIN1Q13526 163 aaPredicted RBP13.52□□□□□ -0.25
SREBF1-221ENST00000583080 DEFB112Q30KQ8 113 aa13.52□□□□□ -0.25
SREBF1-221ENST00000583080 BRD3OSQ6XYD6 125 aa13.52□□□□□ -0.25
SREBF1-221ENST00000583080 SLC30A8Q8IWU4 369 aa13.52□□□□□ -0.25
SREBF1-221ENST00000583080 MUC20Q8N307 709 aaPredicted RBP13.52□□□□□ -0.25
SREBF1-221ENST00000583080 KIR3DL3Q8N743 410 aa13.52□□□□□ -0.25
SREBF1-221ENST00000583080 NPEPL1Q8NDH3 523 aa13.52□□□□□ -0.25
SREBF1-221ENST00000583080 ZNF420Q8TAQ5 688 aaPredicted RBP13.52□□□□□ -0.25
SREBF1-221ENST00000583080 CMBLQ96DG6 245 aa13.52□□□□□ -0.25
SREBF1-221ENST00000583080 GCM1Q9NP62 436 aa13.52□□□□□ -0.25
SREBF1-221ENST00000583080 MAN2C1Q9NTJ4 1040 aa13.52□□□□□ -0.25
SREBF1-221ENST00000583080 IL19Q9UHD0 177 aa13.52□□□□□ -0.25
SREBF1-221ENST00000583080 IL20RAQ9UHF4 553 aa13.52□□□□□ -0.25
SREBF1-221ENST00000583080 RIMS3Q9UJD0 308 aa13.52□□□□□ -0.25
SREBF1-221ENST00000583080 NDRG4Q9ULP0 352 aaKnown RBP13.52□□□□□ -0.25
SREBF1-221ENST00000583080 HIF3AQ9Y2N7 669 aa13.52□□□□□ -0.25
SREBF1-221ENST00000583080 FAM181BA6NEQ2 426 aa13.51□□□□□ -0.25
SREBF1-221ENST00000583080 DOK2O60496 412 aa13.51□□□□□ -0.25
SREBF1-221ENST00000583080 CYB5R3P00387 301 aaPredicted RBP13.51□□□□□ -0.25
SREBF1-221ENST00000583080 KNG1P01042 644 aa13.51□□□□□ -0.25
SREBF1-221ENST00000583080 FUT4P22083 530 aa13.51□□□□□ -0.25
SREBF1-221ENST00000583080 HTR5AP47898 357 aa13.51□□□□□ -0.25
SREBF1-221ENST00000583080 RAG2P55895 527 aa13.51□□□□□ -0.25
SREBF1-221ENST00000583080 RELBQ01201 579 aa13.51□□□□□ -0.25
SREBF1-221ENST00000583080 OCLNQ16625 522 aa13.51□□□□□ -0.25
SREBF1-221ENST00000583080 VMACQ2NL98 169 aa13.51□□□□□ -0.25
SREBF1-221ENST00000583080 INTS11Q5TA45 600 aaKnown RBP13.51□□□□□ -0.25
SREBF1-221ENST00000583080 OTPQ5XKR4 325 aa13.51□□□□□ -0.25
SREBF1-221ENST00000583080 BTNL3Q6UXE8 466 aa13.51□□□□□ -0.25
SREBF1-221ENST00000583080 LRRN1Q6UXK5 716 aa13.51□□□□□ -0.25
SREBF1-221ENST00000583080 KLBQ86Z14 1044 aa13.51□□□□□ -0.25
SREBF1-221ENST00000583080 MICU2Q8IYU8 434 aa13.51□□□□□ -0.25
SREBF1-221ENST00000583080 OR5AS1Q8N127 324 aa13.51□□□□□ -0.25
SREBF1-221ENST00000583080 LRRC75AQ8NAA5 344 aa13.51□□□□□ -0.25
SREBF1-221ENST00000583080 OR10AD1Q8NGE0 317 aa13.51□□□□□ -0.25
SREBF1-221ENST00000583080 SLC7A6Q92536 515 aa13.51□□□□□ -0.25
SREBF1-221ENST00000583080 RBP7Q96R05 134 aa13.51□□□□□ -0.25
SREBF1-221ENST00000583080 MARCH7Q9H992 704 aa13.51□□□□□ -0.25
SREBF1-221ENST00000583080 TMBIM4Q9HC24 238 aa13.51□□□□□ -0.25
SREBF1-221ENST00000583080 POLE4Q9NR33 117 aa13.51□□□□□ -0.25
SREBF1-221ENST00000583080 TBCCD1Q9NVR7 557 aa13.51□□□□□ -0.25
SREBF1-221ENST00000583080 STARD10Q9Y365 291 aa13.51□□□□□ -0.25
SREBF1-221ENST00000583080 NDUFAF1Q9Y375 327 aa13.51□□□□□ -0.25
SREBF1-221ENST00000583080 MED31Q9Y3C7 131 aa13.51□□□□□ -0.25
SREBF1-221ENST00000583080 IGHV3-64DA0A0J9YX35 117 aa13.5□□□□□ -0.25
SREBF1-221ENST00000583080 ANGPT2O15123 496 aa13.5□□□□□ -0.25
SREBF1-221ENST00000583080 VIMP08670 466 aaKnown RBP13.5□□□□□ -0.25
SREBF1-221ENST00000583080 OR1E2P47887 323 aa13.5□□□□□ -0.25
SREBF1-221ENST00000583080 CTXN1P60606 82 aa13.5□□□□□ -0.25
SREBF1-221ENST00000583080 GNB2P62879 340 aa13.5□□□□□ -0.25
SREBF1-221ENST00000583080 NFYCQ13952 458 aa13.5□□□□□ -0.25
SREBF1-221ENST00000583080 ARL9Q6T311 187 aa13.5□□□□□ -0.25
SREBF1-221ENST00000583080 C17orf107Q6ZR85 190 aa13.5□□□□□ -0.25
SREBF1-221ENST00000583080 CCDC80Q76M96 950 aa13.5□□□□□ -0.25
SREBF1-221ENST00000583080 RHOUQ7L0Q8 258 aa13.5□□□□□ -0.25
SREBF1-221ENST00000583080 OR10S1Q8NGN2 331 aa13.5□□□□□ -0.25
SREBF1-221ENST00000583080 RAB40AQ8WXH6 277 aa13.5□□□□□ -0.25
SREBF1-221ENST00000583080 TMEM165Q9HC07 324 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms