RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 PPP1CBP62140 327 aa16.67■□□□□ 0.26
SREBF1-220ENST00000581707 AQP6Q13520 282 aa16.67■□□□□ 0.26
SREBF1-220ENST00000581707 OTPQ5XKR4 325 aa16.67■□□□□ 0.26
SREBF1-220ENST00000581707 DNM1P34Q6PK57 102 aa16.67■□□□□ 0.26
SREBF1-220ENST00000581707 ARL9Q6T311 187 aa16.67■□□□□ 0.26
SREBF1-220ENST00000581707 ZNF620Q6ZNG0 422 aa16.67■□□□□ 0.26
SREBF1-220ENST00000581707 JAZF1Q86VZ6 243 aa16.67■□□□□ 0.26
SREBF1-220ENST00000581707 PRIMA1Q86XR5 153 aa16.67■□□□□ 0.26
SREBF1-220ENST00000581707 HIPK1Q86Z02 1210 aa16.67■□□□□ 0.26
SREBF1-220ENST00000581707 LINC00471Q8N535 108 aa16.67■□□□□ 0.26
SREBF1-220ENST00000581707 ABHD4Q8TB40 342 aa16.67■□□□□ 0.26
SREBF1-220ENST00000581707 SLC25A40Q8TBP6 338 aa16.67■□□□□ 0.26
SREBF1-220ENST00000581707 POP5Q969H6 163 aaKnown RBP16.67■□□□□ 0.26
SREBF1-220ENST00000581707 MARS2Q96GW9 593 aaKnown RBP16.67■□□□□ 0.26
SREBF1-220ENST00000581707 C4orf45Q96LM5 186 aa16.67■□□□□ 0.26
SREBF1-220ENST00000581707 TSSK2Q96PF2 358 aa16.67■□□□□ 0.26
SREBF1-220ENST00000581707 ASH2LQ9UBL3 628 aa16.67■□□□□ 0.26
SREBF1-220ENST00000581707 LRP5LA4QPB2 252 aa16.66■□□□□ 0.26
SREBF1-220ENST00000581707 IDH3BO43837 385 aa16.66■□□□□ 0.26
SREBF1-220ENST00000581707 DOK2O60496 412 aa16.66■□□□□ 0.26
SREBF1-220ENST00000581707 NCR1O76036 304 aa16.66■□□□□ 0.26
SREBF1-220ENST00000581707 RENP00797 406 aa16.66■□□□□ 0.26
SREBF1-220ENST00000581707 NGFP01138 241 aa16.66■□□□□ 0.26
SREBF1-220ENST00000581707 MT-ND5P03915 603 aa16.66■□□□□ 0.26
SREBF1-220ENST00000581707 TACSTD2P09758 323 aa16.66■□□□□ 0.26
SREBF1-220ENST00000581707 HIST1H1CP16403 213 aaKnown RBP16.66■□□□□ 0.26
SREBF1-220ENST00000581707 ZNF16P17020 682 aaPredicted RBP16.66■□□□□ 0.26
SREBF1-220ENST00000581707 MPV17P39210 176 aa16.66■□□□□ 0.26
SREBF1-220ENST00000581707 MAGEB1P43366 347 aa16.66■□□□□ 0.26
SREBF1-220ENST00000581707 HTR5AP47898 357 aa16.66■□□□□ 0.26
SREBF1-220ENST00000581707 CENPAP49450 140 aa16.66■□□□□ 0.26
SREBF1-220ENST00000581707 ARHGDIAP52565 204 aa16.66■□□□□ 0.26
SREBF1-220ENST00000581707 CHN2P52757 468 aa16.66■□□□□ 0.26
SREBF1-220ENST00000581707 MRPS11P82912 194 aaKnown RBP16.66■□□□□ 0.26
SREBF1-220ENST00000581707 KCNMB1Q16558 191 aa16.66■□□□□ 0.26
SREBF1-220ENST00000581707 PCGF3Q3KNV8 242 aa16.66■□□□□ 0.26
SREBF1-220ENST00000581707 FAM98BQ52LJ0 330 aaKnown RBP16.66■□□□□ 0.26
SREBF1-220ENST00000581707 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.66■□□□□ 0.263e-14■■□□□ 14.2
SREBF1-220ENST00000581707 LEG1Q6P5S2 330 aa16.66■□□□□ 0.26
SREBF1-220ENST00000581707 RFPL4BQ6ZWI9 263 aa16.66■□□□□ 0.26
SREBF1-220ENST00000581707 VASH1Q7L8A9 365 aaPredicted RBP16.66■□□□□ 0.26
SREBF1-220ENST00000581707 TRPM8Q7Z2W7 1104 aa16.66■□□□□ 0.26
SREBF1-220ENST00000581707 OR9Q2Q8NGE9 314 aa16.66■□□□□ 0.26
SREBF1-220ENST00000581707 OR4C15Q8NGM1 316 aa16.66■□□□□ 0.26
SREBF1-220ENST00000581707 OR4K13Q8NH42 304 aa16.66■□□□□ 0.26
SREBF1-220ENST00000581707 KLF14Q8TD94 323 aaPredicted RBP16.66■□□□□ 0.26
SREBF1-220ENST00000581707 BCAS4Q8TDM0 211 aa16.66■□□□□ 0.26
SREBF1-220ENST00000581707 MSI2Q96DH6 328 aaKnown RBP16.66■□□□□ 0.26
SREBF1-220ENST00000581707 ASB9Q96DX5 294 aa16.66■□□□□ 0.26
SREBF1-220ENST00000581707 CLPTM1LQ96KA5 538 aa16.66■□□□□ 0.26
SREBF1-220ENST00000581707 NMNAT3Q96T66 252 aa16.66■□□□□ 0.26
SREBF1-220ENST00000581707 THTPAQ9BU02 230 aa16.66■□□□□ 0.26
SREBF1-220ENST00000581707 OR2J1Q9GZK6 312 aa16.66■□□□□ 0.26
SREBF1-220ENST00000581707 CHODLQ9H9P2 273 aa16.66■□□□□ 0.26
SREBF1-220ENST00000581707 SRA1Q9HD15 236 aaKnown RBP16.66■□□□□ 0.26
SREBF1-220ENST00000581707 PLEK2Q9NYT0 353 aa16.66■□□□□ 0.26
SREBF1-220ENST00000581707 DCTN6O00399 190 aa16.65■□□□□ 0.26
SREBF1-220ENST00000581707 LILRA1O75019 489 aa16.65■□□□□ 0.26
SREBF1-220ENST00000581707 CCNB2O95067 398 aa16.65■□□□□ 0.26
SREBF1-220ENST00000581707 ABHD16AO95870 558 aa16.65■□□□□ 0.26
SREBF1-220ENST00000581707 ACHEP22303 614 aa16.65■□□□□ 0.26
SREBF1-220ENST00000581707 CCL8P80075 99 aa16.65■□□□□ 0.26
SREBF1-220ENST00000581707 GLO1Q04760 184 aa16.65■□□□□ 0.26
SREBF1-220ENST00000581707 MBNL2Q5VZF2 373 aaKnown RBP16.65■□□□□ 0.26
SREBF1-220ENST00000581707 OR6V1Q8N148 313 aa16.65■□□□□ 0.26
SREBF1-220ENST00000581707 IPCEF1Q8WWN9 437 aaPredicted RBP16.65■□□□□ 0.26
SREBF1-220ENST00000581707 CCDC124Q96CT7 223 aaKnown RBP16.65■□□□□ 0.26
SREBF1-220ENST00000581707 LRGUKQ96M69 825 aa16.65■□□□□ 0.26
SREBF1-220ENST00000581707 SNX18Q96RF0 628 aa16.65■□□□□ 0.26
SREBF1-220ENST00000581707 BTBD10Q9BSF8 475 aa16.65■□□□□ 0.26
SREBF1-220ENST00000581707 NKIRAS2Q9NYR9 191 aa16.65■□□□□ 0.26
SREBF1-220ENST00000581707 B9D1Q9UPM9 204 aa16.65■□□□□ 0.26
SREBF1-220ENST00000581707 ANK3Q12955 4377 aaKnown RBP16.65■□□□□ 0.26
SREBF1-220ENST00000581707 IGLV1-36A0A0B4J1U3 117 aa16.64■□□□□ 0.25
SREBF1-220ENST00000581707 LOC100289279A0A1B0GTE1 492 aa16.64■□□□□ 0.25
SREBF1-220ENST00000581707 H3BSA7 217 aa16.64■□□□□ 0.25
SREBF1-220ENST00000581707 GPANK1O95872 356 aa16.64■□□□□ 0.25
SREBF1-220ENST00000581707 GASTP01350 101 aa16.64■□□□□ 0.25
SREBF1-220ENST00000581707 ZNF81P51508 661 aa16.64■□□□□ 0.25
SREBF1-220ENST00000581707 TMEM33P57088 247 aa16.64■□□□□ 0.25
SREBF1-220ENST00000581707 PPP1R8Q12972 351 aaKnown RBP16.64■□□□□ 0.25
SREBF1-220ENST00000581707 TRIP10Q15642 601 aa16.64■□□□□ 0.25
SREBF1-220ENST00000581707 SLC35F1Q5T1Q4 408 aa16.64■□□□□ 0.25
SREBF1-220ENST00000581707 OR2T5Q6IEZ7 315 aa16.64■□□□□ 0.25
SREBF1-220ENST00000581707 ZNF770Q6IQ21 691 aaPredicted RBP16.64■□□□□ 0.25
SREBF1-220ENST00000581707 RPL13AP3Q6NVV1 102 aa16.64■□□□□ 0.25
SREBF1-220ENST00000581707 PGM2L1Q6PCE3 622 aa16.64■□□□□ 0.25
SREBF1-220ENST00000581707 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.64■□□□□ 0.25
SREBF1-220ENST00000581707 OR2T29Q8NH02 315 aa16.64■□□□□ 0.25
SREBF1-220ENST00000581707 GTF3AQ92664 365 aaKnown RBP16.64■□□□□ 0.25
SREBF1-220ENST00000581707 YIPF5Q969M3 257 aa16.64■□□□□ 0.25
SREBF1-220ENST00000581707 EGLN3Q9H6Z9 239 aa16.64■□□□□ 0.25
SREBF1-220ENST00000581707 RPRD1BQ9NQG5 326 aaKnown RBP16.64■□□□□ 0.25
SREBF1-220ENST00000581707 TBCCD1Q9NVR7 557 aa16.64■□□□□ 0.25
SREBF1-220ENST00000581707 POLR1DQ9Y2S0 133 aa16.64■□□□□ 0.25
SREBF1-220ENST00000581707 GRIP1Q9Y3R0 1128 aa16.64■□□□□ 0.25
SREBF1-220ENST00000581707 CDH10Q9Y6N8 788 aa16.64■□□□□ 0.25
SREBF1-220ENST00000581707 PLSCR5A0PG75 271 aa16.63■□□□□ 0.25
SREBF1-220ENST00000581707 ACOT8O14734 319 aa16.63■□□□□ 0.25
SREBF1-220ENST00000581707 RER1O15258 196 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms