RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 ZNF688P0C7X2 276 aa1.34□□□□□ -2.19
SMCHD1-206ENST00000581631 GPR89BP0CG08 455 aa1.34□□□□□ -2.19
SMCHD1-206ENST00000581631 ME2P23368 584 aa1.34□□□□□ -2.19
SMCHD1-206ENST00000581631 WARSP23381 471 aaKnown RBP1.34□□□□□ -2.19
SMCHD1-206ENST00000581631 IFNA8P32881 189 aa1.34□□□□□ -2.19
SMCHD1-206ENST00000581631 CCNG1P51959 295 aa1.34□□□□□ -2.19
SMCHD1-206ENST00000581631 TAS2R31P59538 309 aa1.34□□□□□ -2.19
SMCHD1-206ENST00000581631 RBX1P62877 108 aa1.34□□□□□ -2.19
SMCHD1-206ENST00000581631 KCNJ2P63252 427 aa1.34□□□□□ -2.19
SMCHD1-206ENST00000581631 CRADDP78560 199 aa1.34□□□□□ -2.19
SMCHD1-206ENST00000581631 MPV17L2Q567V2 206 aa1.34□□□□□ -2.19
SMCHD1-206ENST00000581631 CCDC73Q6ZRK6 1079 aa1.34□□□□□ -2.19
SMCHD1-206ENST00000581631 TGIF2LXQ8IUE1 241 aa1.34□□□□□ -2.19
SMCHD1-206ENST00000581631 LIX1Q8N485 282 aa1.34□□□□□ -2.19
SMCHD1-206ENST00000581631 C1orf64Q8NEQ6 169 aa1.34□□□□□ -2.19
SMCHD1-206ENST00000581631 OR5M1Q8NGP8 315 aa1.34□□□□□ -2.19
SMCHD1-206ENST00000581631 OR1S2Q8NGQ3 325 aa1.34□□□□□ -2.19
SMCHD1-206ENST00000581631 PIBF1Q8WXW3 757 aa1.34□□□□□ -2.19
SMCHD1-206ENST00000581631 SLC41A3Q96GZ6 507 aa1.34□□□□□ -2.19
SMCHD1-206ENST00000581631 ANGPTL4Q9BY76 406 aa1.34□□□□□ -2.19
SMCHD1-206ENST00000581631 FRMD8P1Q9BZ68 369 aaPredicted RBP1.34□□□□□ -2.19
SMCHD1-206ENST00000581631 FGF23Q9GZV9 251 aaPredicted RBP1.34□□□□□ -2.19
SMCHD1-206ENST00000581631 VCX2Q9H322 139 aa1.34□□□□□ -2.19
SMCHD1-206ENST00000581631 ZNF639Q9UID6 485 aa1.34□□□□□ -2.19
SMCHD1-206ENST00000581631 CBY1Q9Y3M2 126 aa1.34□□□□□ -2.19
SMCHD1-206ENST00000581631 NPTNQ9Y639 398 aa1.34□□□□□ -2.19
SMCHD1-206ENST00000581631 LTBP4Q8N2S1 1624 aa1.33□□□□□ -2.2
SMCHD1-206ENST00000581631 TMEM120BA0PK00 339 aa1.33□□□□□ -2.2
SMCHD1-206ENST00000581631 OR6C74A6NCV1 312 aa1.33□□□□□ -2.2
SMCHD1-206ENST00000581631 FAM47DPA6NHR8 397 aa1.33□□□□□ -2.2
SMCHD1-206ENST00000581631 BTNL10A8MVZ5 291 aa1.33□□□□□ -2.2
SMCHD1-206ENST00000581631 CHST10O43529 356 aa1.33□□□□□ -2.2
SMCHD1-206ENST00000581631 EEDO75530 441 aaKnown RBP1.33□□□□□ -2.2
SMCHD1-206ENST00000581631 CLIC3O95833 236 aa1.33□□□□□ -2.2
SMCHD1-206ENST00000581631 KITLGP21583 273 aa1.33□□□□□ -2.2
SMCHD1-206ENST00000581631 F2RP25116 425 aa1.33□□□□□ -2.2
SMCHD1-206ENST00000581631 RND2P52198 227 aa1.33□□□□□ -2.2
SMCHD1-206ENST00000581631 CDKN2DP55273 166 aa1.33□□□□□ -2.2
SMCHD1-206ENST00000581631 RPS11P62280 158 aaKnown RBP eCLIP1.33□□□□□ -2.2
SMCHD1-206ENST00000581631 MRPS22P82650 360 aaKnown RBP1.33□□□□□ -2.2
SMCHD1-206ENST00000581631 CDK5Q00535 292 aa1.33□□□□□ -2.2
SMCHD1-206ENST00000581631 SLC25A11Q02978 314 aaKnown RBP1.33□□□□□ -2.2
SMCHD1-206ENST00000581631 FUT5Q11128 374 aa1.33□□□□□ -2.2
SMCHD1-206ENST00000581631 TGFBIQ15582 683 aa1.33□□□□□ -2.2
SMCHD1-206ENST00000581631 RNASE13Q5GAN3 156 aaKnown RBP1.33□□□□□ -2.2
SMCHD1-206ENST00000581631 AVPI1Q5T686 147 aa1.33□□□□□ -2.2
SMCHD1-206ENST00000581631 MS4A15Q8N5U1 240 aa1.33□□□□□ -2.2
SMCHD1-206ENST00000581631 APCDD1LQ8NCL9 501 aa1.33□□□□□ -2.2
SMCHD1-206ENST00000581631 GALNT14Q96FL9 552 aa1.33□□□□□ -2.2
SMCHD1-206ENST00000581631 PKNOX2Q96KN3 472 aa1.33□□□□□ -2.2
SMCHD1-206ENST00000581631 TSGA13Q96PP4 275 aa1.33□□□□□ -2.2
SMCHD1-206ENST00000581631 HSD17B10Q99714 261 aaKnown RBP1.33□□□□□ -2.2
SMCHD1-206ENST00000581631 SHANK2-AS3Q9BTD1 123 aa1.33□□□□□ -2.2
SMCHD1-206ENST00000581631 GORASP2Q9H8Y8 452 aa1.33□□□□□ -2.2
SMCHD1-206ENST00000581631 SGK2Q9HBY8 427 aa1.33□□□□□ -2.2
SMCHD1-206ENST00000581631 C8orf17Q9NRJ1 99 aa1.33□□□□□ -2.2
SMCHD1-206ENST00000581631 LSM7Q9UK45 103 aaKnown RBP1.33□□□□□ -2.2
SMCHD1-206ENST00000581631 GOLT1BQ9Y3E0 138 aa1.33□□□□□ -2.2
SMCHD1-206ENST00000581631 SHROOM3Q8TF72 1996 aa1.33□□□□□ -2.2
SMCHD1-206ENST00000581631 MAPK8IP3Q9UPT6 1336 aa1.33□□□□□ -2.2
SMCHD1-206ENST00000581631 TRAV6A0A075B6T7 132 aa1.32□□□□□ -2.2
SMCHD1-206ENST00000581631 TRAV19A0A0A6YYK7 116 aa1.32□□□□□ -2.2
SMCHD1-206ENST00000581631 CDC7O00311 574 aa1.32□□□□□ -2.2
SMCHD1-206ENST00000581631 FOXE1O00358 373 aaPredicted RBP1.32□□□□□ -2.2
SMCHD1-206ENST00000581631 H6PDO95479 791 aa1.32□□□□□ -2.2
SMCHD1-206ENST00000581631 IL1BP01584 269 aa1.32□□□□□ -2.2
SMCHD1-206ENST00000581631 IGLV3-25P01717 112 aa1.32□□□□□ -2.2
SMCHD1-206ENST00000581631 SERPIND1P05546 499 aa1.32□□□□□ -2.2
SMCHD1-206ENST00000581631 ZNF250P15622 560 aa1.32□□□□□ -2.2
SMCHD1-206ENST00000581631 DESP17661 470 aa1.32□□□□□ -2.2
SMCHD1-206ENST00000581631 LGALS3P17931 250 aaKnown RBP1.32□□□□□ -2.2
SMCHD1-206ENST00000581631 LOXP28300 417 aaPredicted RBP1.32□□□□□ -2.2
SMCHD1-206ENST00000581631 TNFSF9P41273 254 aa1.32□□□□□ -2.2
SMCHD1-206ENST00000581631 IFNAR2P48551 515 aa1.32□□□□□ -2.2
SMCHD1-206ENST00000581631 HCAR3P49019 387 aa1.32□□□□□ -2.2
SMCHD1-206ENST00000581631 CEBPDP49716 269 aaPredicted RBP1.32□□□□□ -2.2
SMCHD1-206ENST00000581631 SSR4P51571 173 aa1.32□□□□□ -2.2
SMCHD1-206ENST00000581631 AIF1P55008 147 aa1.32□□□□□ -2.2
SMCHD1-206ENST00000581631 UBE2HP62256 183 aa1.32□□□□□ -2.2
SMCHD1-206ENST00000581631 PRKCDQ05655 676 aa1.32□□□□□ -2.2
SMCHD1-206ENST00000581631 C6orf226Q5I0X4 101 aa1.32□□□□□ -2.2
SMCHD1-206ENST00000581631 CASP12Q6UXS9 341 aa1.32□□□□□ -2.2
SMCHD1-206ENST00000581631 SPANXA2-OT1Q8N9U9 137 aa1.32□□□□□ -2.2
SMCHD1-206ENST00000581631 TTLQ8NG68 377 aa1.32□□□□□ -2.2
SMCHD1-206ENST00000581631 PLPPR1Q8TBJ4 325 aa1.32□□□□□ -2.2
SMCHD1-206ENST00000581631 LRRC29Q8WV35 223 aa1.32□□□□□ -2.2
SMCHD1-206ENST00000581631 UBE2Q2Q8WVN8 375 aa1.32□□□□□ -2.2
SMCHD1-206ENST00000581631 SLC39A3Q9BRY0 314 aa1.32□□□□□ -2.2
SMCHD1-206ENST00000581631 ROPN1BQ9BZX4 212 aaPredicted RBP1.32□□□□□ -2.2
SMCHD1-206ENST00000581631 EDA2RQ9HAV5 297 aa1.32□□□□□ -2.2
SMCHD1-206ENST00000581631 SAMSN1Q9NSI8 373 aaKnown RBP1.32□□□□□ -2.2
SMCHD1-206ENST00000581631 SIGLEC7Q9Y286 467 aa1.32□□□□□ -2.2
SMCHD1-206ENST00000581631 ATP6V0A2Q9Y487 856 aa1.32□□□□□ -2.2
SMCHD1-206ENST00000581631 NLRC5Q86WI3 1866 aa1.31□□□□□ -2.2
SMCHD1-206ENST00000581631 IGLV1-36A0A0B4J1U3 117 aa1.31□□□□□ -2.2
SMCHD1-206ENST00000581631 GLYATL1P3A0A0U1RQE8 302 aa1.31□□□□□ -2.2
SMCHD1-206ENST00000581631 CLRN2A0PK11 232 aa1.31□□□□□ -2.2
SMCHD1-206ENST00000581631 OR52A4PA6NMU1 304 aa1.31□□□□□ -2.2
SMCHD1-206ENST00000581631 RDH16O75452 317 aa1.31□□□□□ -2.2
SMCHD1-206ENST00000581631 CLPXO76031 633 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms