RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 LHFPL6Q9Y693 200 aa13.51□□□□□ -0.25
SLC6A4-205ENST00000579221 ATP23Q9Y6H3 246 aa13.51□□□□□ -0.25
SLC6A4-205ENST00000579221 COMMD3-BMI1R4GMX3 469 aa13.51□□□□□ -0.25
SLC6A4-205ENST00000579221 SLC22A31A6NKX4 558 aa13.5□□□□□ -0.25
SLC6A4-205ENST00000579221 RER1O15258 196 aa13.5□□□□□ -0.25
SLC6A4-205ENST00000579221 SPARCP09486 303 aa13.5□□□□□ -0.25
SLC6A4-205ENST00000579221 COX5BP10606 129 aa13.5□□□□□ -0.25
SLC6A4-205ENST00000579221 PRF1P14222 555 aa13.5□□□□□ -0.25
SLC6A4-205ENST00000579221 STOMP27105 288 aa13.5□□□□□ -0.25
SLC6A4-205ENST00000579221 APEX1P27695 318 aaKnown RBP13.5□□□□□ -0.25
SLC6A4-205ENST00000579221 GDI2P50395 445 aaKnown RBP13.5□□□□□ -0.25
SLC6A4-205ENST00000579221 HIST1H3AP68431 136 aa13.5□□□□□ -0.25
SLC6A4-205ENST00000579221 OCLNQ16625 522 aa13.5□□□□□ -0.25
SLC6A4-205ENST00000579221 PCK2Q16822 640 aa13.5□□□□□ -0.25
SLC6A4-205ENST00000579221 CCDC92Q53HC0 331 aaPredicted RBP13.5□□□□□ -0.25
SLC6A4-205ENST00000579221 SLC25A30Q5SVS4 291 aa13.5□□□□□ -0.25
SLC6A4-205ENST00000579221 HIST2H3PS2Q5TEC6 136 aa13.5□□□□□ -0.25
SLC6A4-205ENST00000579221 MEDAGQ5VYS4 303 aa13.5□□□□□ -0.25
SLC6A4-205ENST00000579221 SLC18B1Q6NT16 456 aa13.5□□□□□ -0.25
SLC6A4-205ENST00000579221 ADAM5Q6NVV9 412 aa13.5□□□□□ -0.25
SLC6A4-205ENST00000579221 ZNF774Q6NX45 483 aa13.5□□□□□ -0.25
SLC6A4-205ENST00000579221 CORO6Q6QEF8 472 aa13.5□□□□□ -0.25
SLC6A4-205ENST00000579221 LYPD4Q6UWN0 246 aa13.5□□□□□ -0.25
SLC6A4-205ENST00000579221 HIST2H3AQ71DI3 136 aa13.5□□□□□ -0.25
SLC6A4-205ENST00000579221 ZNF584Q8IVC4 421 aa13.5□□□□□ -0.25
SLC6A4-205ENST00000579221 LINC00346Q8IVM7 164 aa13.5□□□□□ -0.25
SLC6A4-205ENST00000579221 OR4F15Q8NGB8 312 aa13.5□□□□□ -0.25
SLC6A4-205ENST00000579221 OR6N2Q8NGY6 317 aa13.5□□□□□ -0.25
SLC6A4-205ENST00000579221 RFKQ969G6 155 aa13.5□□□□□ -0.25
SLC6A4-205ENST00000579221 CDH20Q9HBT6 801 aa13.5□□□□□ -0.25
SLC6A4-205ENST00000579221 GDF2Q9UK05 429 aaPredicted RBP13.5□□□□□ -0.25
SLC6A4-205ENST00000579221 POU2F3Q9UKI9 436 aa13.5□□□□□ -0.25
SLC6A4-205ENST00000579221 IGHV2OR16-5A0A0B4J2B6 119 aa13.49□□□□□ -0.25
SLC6A4-205ENST00000579221 CCDC182A6NF36 153 aa13.49□□□□□ -0.25
SLC6A4-205ENST00000579221 SNTNA6NMZ2 147 aa13.49□□□□□ -0.25
SLC6A4-205ENST00000579221 SHISA9B4DS77 424 aa13.49□□□□□ -0.25
SLC6A4-205ENST00000579221 H0YAE9 185 aa13.49□□□□□ -0.25
SLC6A4-205ENST00000579221 DOK2O60496 412 aa13.49□□□□□ -0.25
SLC6A4-205ENST00000579221 ZNF35P13682 527 aa13.49□□□□□ -0.25
SLC6A4-205ENST00000579221 CALCRP30988 508 aa13.49□□□□□ -0.25
SLC6A4-205ENST00000579221 CAPGP40121 348 aa13.49□□□□□ -0.25
SLC6A4-205ENST00000579221 CDH11P55287 796 aa13.49□□□□□ -0.25
SLC6A4-205ENST00000579221 ADARB1P78563 741 aaKnown RBP13.49□□□□□ -0.25
SLC6A4-205ENST00000579221 GALK2Q01415 458 aa13.49□□□□□ -0.25
SLC6A4-205ENST00000579221 TMED1Q13445 227 aa13.49□□□□□ -0.25
SLC6A4-205ENST00000579221 RAB35Q15286 201 aa13.49□□□□□ -0.25
SLC6A4-205ENST00000579221 ZNF672Q499Z4 452 aaPredicted RBP13.49□□□□□ -0.25
SLC6A4-205ENST00000579221 ELFN2Q5R3F8 820 aa13.49□□□□□ -0.25
SLC6A4-205ENST00000579221 B3GLCTQ6Y288 498 aa13.49□□□□□ -0.25
SLC6A4-205ENST00000579221 VASH1Q7L8A9 365 aaPredicted RBP13.49□□□□□ -0.25
SLC6A4-205ENST00000579221 MYPOPQ86VE0 399 aaPredicted RBP13.49□□□□□ -0.25
SLC6A4-205ENST00000579221 TIGD4Q8IY51 512 aa13.49□□□□□ -0.25
SLC6A4-205ENST00000579221 OR1F12Q8NHA8 337 aa13.49□□□□□ -0.25
SLC6A4-205ENST00000579221 RHOXF1Q8NHV9 184 aa13.49□□□□□ -0.25
SLC6A4-205ENST00000579221 AKAP1Q92667 903 aaKnown RBP eCLIP13.49□□□□□ -0.25
SLC6A4-205ENST00000579221 Q96MT0 163 aa13.49□□□□□ -0.25
SLC6A4-205ENST00000579221 ZNF582Q96NG8 517 aaPredicted RBP13.49□□□□□ -0.25
SLC6A4-205ENST00000579221 ADI1Q9BV57 179 aa13.49□□□□□ -0.25
SLC6A4-205ENST00000579221 CLN6Q9NWW5 311 aa13.49□□□□□ -0.25
SLC6A4-205ENST00000579221 HAO2Q9NYQ3 351 aa13.49□□□□□ -0.25
SLC6A4-205ENST00000579221 CISD1Q9NZ45 108 aaKnown RBP13.49□□□□□ -0.25
SLC6A4-205ENST00000579221 EIF3KQ9UBQ5 218 aaKnown RBP13.49□□□□□ -0.25
SLC6A4-205ENST00000579221 WARS2Q9UGM6 360 aaKnown RBP13.49□□□□□ -0.25
SLC6A4-205ENST00000579221 VSTM5A8MXK1 200 aa13.48□□□□□ -0.25
SLC6A4-205ENST00000579221 ATP6V1G2-DDX39BF2Z307 99 aa13.48□□□□□ -0.25
SLC6A4-205ENST00000579221 SYNGR3O43761 229 aa13.48□□□□□ -0.25
SLC6A4-205ENST00000579221 CCNOP22674 350 aa13.48□□□□□ -0.25
SLC6A4-205ENST00000579221 HTR1FP30939 366 aa13.48□□□□□ -0.25
SLC6A4-205ENST00000579221 RPS27P42677 84 aaKnown RBP13.48□□□□□ -0.25
SLC6A4-205ENST00000579221 HTR5AP47898 357 aa13.48□□□□□ -0.25
SLC6A4-205ENST00000579221 IL5RAQ01344 420 aa13.48□□□□□ -0.25
SLC6A4-205ENST00000579221 SPOCK1Q08629 439 aa13.48□□□□□ -0.25
SLC6A4-205ENST00000579221 ECH1Q13011 328 aa13.48□□□□□ -0.25
SLC6A4-205ENST00000579221 IL18R1Q13478 541 aa13.48□□□□□ -0.25
SLC6A4-205ENST00000579221 EIF2B1Q14232 305 aaKnown RBP13.48□□□□□ -0.25
SLC6A4-205ENST00000579221 TMEM154Q6P9G4 183 aa13.48□□□□□ -0.25
SLC6A4-205ENST00000579221 ARL9Q6T311 187 aa13.48□□□□□ -0.25
SLC6A4-205ENST00000579221 SLC16A9Q7RTY1 509 aa13.48□□□□□ -0.25
SLC6A4-205ENST00000579221 DCXRQ7Z4W1 244 aa13.48□□□□□ -0.25
SLC6A4-205ENST00000579221 ENTHD1Q8IYW4 607 aa13.48□□□□□ -0.25
SLC6A4-205ENST00000579221 ZNF454Q8N9F8 522 aa13.48□□□□□ -0.25
SLC6A4-205ENST00000579221 SETD9Q8NE22 299 aa13.48□□□□□ -0.25
SLC6A4-205ENST00000579221 KBTBD8Q8NFY9 601 aa13.48□□□□□ -0.25
SLC6A4-205ENST00000579221 LILRB1Q8NHL6 650 aaPredicted RBP13.48□□□□□ -0.25
SLC6A4-205ENST00000579221 POM121L2Q96KW2 1035 aa13.48□□□□□ -0.25
SLC6A4-205ENST00000579221 COQ7Q99807 217 aa13.48□□□□□ -0.25
SLC6A4-205ENST00000579221 YIPF3Q9GZM5 350 aa13.48□□□□□ -0.25
SLC6A4-205ENST00000579221 HDHD2Q9H0R4 259 aa13.48□□□□□ -0.25
SLC6A4-205ENST00000579221 PLEKHF2Q9H8W4 249 aa13.48□□□□□ -0.25
SLC6A4-205ENST00000579221 DNAJC27Q9NZQ0 273 aa13.48□□□□□ -0.25
SLC6A4-205ENST00000579221 ATPIF1Q9UII2 106 aa13.48□□□□□ -0.25
SLC6A4-205ENST00000579221 EDARQ9UNE0 448 aa13.48□□□□□ -0.25
SLC6A4-205ENST00000579221 COL12A1Q99715 3063 aa13.48□□□□□ -0.25
SLC6A4-205ENST00000579221 LOC100509620A0A075B734 347 aa13.47□□□□□ -0.25
SLC6A4-205ENST00000579221 C5orf49A4QMS7 147 aa13.47□□□□□ -0.25
SLC6A4-205ENST00000579221 OR6C6A6NF89 314 aa13.47□□□□□ -0.25
SLC6A4-205ENST00000579221 HS3ST1O14792 307 aa13.47□□□□□ -0.25
SLC6A4-205ENST00000579221 SELENOFO60613 162 aa13.47□□□□□ -0.25
SLC6A4-205ENST00000579221 ENTPD6O75354 484 aa13.47□□□□□ -0.25
SLC6A4-205ENST00000579221 CCL2P13500 99 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms