RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 RASD2Q96D21 266 aa7.54□□□□□ -1.2
GGA3-207ENST00000578896 SIKE1Q9BRV8 207 aa7.54□□□□□ -1.2
GGA3-207ENST00000578896 POLR2J2Q9GZM3 115 aaKnown RBP7.54□□□□□ -1.2
GGA3-207ENST00000578896 EGLN1Q9GZT9 426 aa7.54□□□□□ -1.2
GGA3-207ENST00000578896 POLR2J3Q9H1A7 115 aaKnown RBP7.54□□□□□ -1.2
GGA3-207ENST00000578896 GID8Q9NWU2 228 aa7.54□□□□□ -1.2
GGA3-207ENST00000578896 IL20RAQ9UHF4 553 aa7.54□□□□□ -1.2
GGA3-207ENST00000578896 NPTNQ9Y639 398 aa7.54□□□□□ -1.2
GGA3-207ENST00000578896 TEX13CA0A0J9YWL9 993 aa7.53□□□□□ -1.2
GGA3-207ENST00000578896 A6NIZ1 184 aa7.53□□□□□ -1.2
GGA3-207ENST00000578896 NPIPB13A6NJU9 1138 aa7.53□□□□□ -1.2
GGA3-207ENST00000578896 BBIP1A8MTZ0 92 aa7.53□□□□□ -1.2
GGA3-207ENST00000578896 NPIPB4C9JG80 1138 aa7.53□□□□□ -1.2
GGA3-207ENST00000578896 CXCR6O00574 342 aa7.53□□□□□ -1.2
GGA3-207ENST00000578896 SPRY1O43609 319 aaPredicted RBP7.53□□□□□ -1.2
GGA3-207ENST00000578896 DOK2O60496 412 aa7.53□□□□□ -1.2
GGA3-207ENST00000578896 FSHBP01225 129 aa7.53□□□□□ -1.2
GGA3-207ENST00000578896 IGHV2-70P01814 119 aa7.53□□□□□ -1.2
GGA3-207ENST00000578896 IFNW1P05000 195 aa7.53□□□□□ -1.2
GGA3-207ENST00000578896 VIMP08670 466 aaKnown RBP7.53□□□□□ -1.2
GGA3-207ENST00000578896 TROVE2P10155 538 aaKnown RBP eCLIP7.53□□□□□ -1.2
GGA3-207ENST00000578896 NCK1P16333 377 aa7.53□□□□□ -1.2
GGA3-207ENST00000578896 CTLA4P16410 223 aa7.53□□□□□ -1.2
GGA3-207ENST00000578896 GUCA1AP43080 201 aaPredicted RBP7.53□□□□□ -1.2
GGA3-207ENST00000578896 COMPP49747 757 aaPredicted RBP7.53□□□□□ -1.2
GGA3-207ENST00000578896 ARHGDIAP52565 204 aa7.53□□□□□ -1.2
GGA3-207ENST00000578896 RAP1BP61224 184 aa7.53□□□□□ -1.2
GGA3-207ENST00000578896 PCBD1P61457 104 aa7.53□□□□□ -1.2
GGA3-207ENST00000578896 RAP1AP62834 184 aa7.53□□□□□ -1.2
GGA3-207ENST00000578896 LIPEQ05469 1076 aa7.53□□□□□ -1.2
GGA3-207ENST00000578896 CDK5R2Q13319 367 aa7.53□□□□□ -1.2
GGA3-207ENST00000578896 HLXQ14774 488 aaPredicted RBP7.53□□□□□ -1.2
GGA3-207ENST00000578896 TRAM2Q15035 370 aa7.53□□□□□ -1.2
GGA3-207ENST00000578896 ZMYND11Q15326 602 aa7.53□□□□□ -1.2
GGA3-207ENST00000578896 AWAT1Q58HT5 328 aa7.53□□□□□ -1.2
GGA3-207ENST00000578896 COQ5Q5HYK3 327 aa7.53□□□□□ -1.2
GGA3-207ENST00000578896 KLF17Q5JT82 389 aaPredicted RBP7.53□□□□□ -1.2
GGA3-207ENST00000578896 USP43Q70EL4 1123 aa7.53□□□□□ -1.2
GGA3-207ENST00000578896 FKBP9P1Q75LS8 142 aa7.53□□□□□ -1.2
GGA3-207ENST00000578896 VASH1Q7L8A9 365 aaPredicted RBP7.53□□□□□ -1.2
GGA3-207ENST00000578896 TSEN54Q7Z6J9 526 aaKnown RBP7.53□□□□□ -1.2
GGA3-207ENST00000578896 SLC15A3Q8IY34 581 aa7.53□□□□□ -1.2
GGA3-207ENST00000578896 OFCC1Q8IZS5 231 aa7.53□□□□□ -1.2
GGA3-207ENST00000578896 SIGLECL1Q8N7X8 197 aa7.53□□□□□ -1.2
GGA3-207ENST00000578896 PCYOX1LQ8NBM8 494 aa7.53□□□□□ -1.2
GGA3-207ENST00000578896 DEFB108BQ8NET1 73 aa7.53□□□□□ -1.2
GGA3-207ENST00000578896 ZNF420Q8TAQ5 688 aaPredicted RBP7.53□□□□□ -1.2
GGA3-207ENST00000578896 ST7LQ8TDW4 575 aa7.53□□□□□ -1.2
GGA3-207ENST00000578896 DVL3Q92997 716 aaPredicted RBP7.53□□□□□ -1.2
GGA3-207ENST00000578896 FAM46AQ96IP4 442 aaKnown RBP7.53□□□□□ -1.2
GGA3-207ENST00000578896 HSH2DQ96JZ2 352 aa7.53□□□□□ -1.2
GGA3-207ENST00000578896 RBM4Q9BWF3 364 aaKnown RBP7.53□□□□□ -1.2
GGA3-207ENST00000578896 SUCNR1Q9BXA5 334 aa7.53□□□□□ -1.2
GGA3-207ENST00000578896 ELOVL3Q9HB03 270 aa7.53□□□□□ -1.2
GGA3-207ENST00000578896 CYSLTR2Q9NS75 346 aa7.53□□□□□ -1.2
GGA3-207ENST00000578896 TMEM106BQ9NUM4 274 aa7.53□□□□□ -1.2
GGA3-207ENST00000578896 PTTG3PQ9NZH4 202 aa7.53□□□□□ -1.2
GGA3-207ENST00000578896 GRHPRQ9UBQ7 328 aa7.53□□□□□ -1.2
GGA3-207ENST00000578896 ZNF69Q9UC07 566 aa7.53□□□□□ -1.2
GGA3-207ENST00000578896 PURGQ9UJV8 347 aaKnown RBP7.53□□□□□ -1.2
GGA3-207ENST00000578896 COA3Q9Y2R0 106 aaPredicted RBP7.53□□□□□ -1.2
GGA3-207ENST00000578896 PCDHGB1Q9Y5G3 927 aa7.53□□□□□ -1.2
GGA3-207ENST00000578896 CAPN7Q9Y6W3 813 aa7.53□□□□□ -1.2
GGA3-207ENST00000578896 PRSS37A4D1T9 235 aa7.52□□□□□ -1.21
GGA3-207ENST00000578896 GMNCA6NCL1 334 aa7.52□□□□□ -1.21
GGA3-207ENST00000578896 C12orf71A8MTZ7 269 aa7.52□□□□□ -1.21
GGA3-207ENST00000578896 H0YL77 283 aa7.52□□□□□ -1.21
GGA3-207ENST00000578896 J3QLI3 93 aa7.52□□□□□ -1.21
GGA3-207ENST00000578896 NME4O00746 187 aa7.52□□□□□ -1.21
GGA3-207ENST00000578896 GSTA4O15217 222 aa7.52□□□□□ -1.21
GGA3-207ENST00000578896 SGCEO43556 437 aa7.52□□□□□ -1.21
GGA3-207ENST00000578896 SLC16A7O60669 478 aa7.52□□□□□ -1.21
GGA3-207ENST00000578896 FOXH1O75593 365 aa7.52□□□□□ -1.21
GGA3-207ENST00000578896 DIRAS1O95057 198 aa7.52□□□□□ -1.21
GGA3-207ENST00000578896 SERPINA1P01009 418 aa7.52□□□□□ -1.21
GGA3-207ENST00000578896 NPPAP01160 153 aa7.52□□□□□ -1.21
GGA3-207ENST00000578896 CD55P08174 381 aa7.52□□□□□ -1.21
GGA3-207ENST00000578896 ADH4P08319 380 aa7.52□□□□□ -1.21
GGA3-207ENST00000578896 CD14P08571 375 aa7.52□□□□□ -1.21
GGA3-207ENST00000578896 NR2C1P13056 603 aa7.52□□□□□ -1.21
GGA3-207ENST00000578896 H2AFXP16104 143 aaPredicted RBP7.52□□□□□ -1.21
GGA3-207ENST00000578896 IFNA8P32881 189 aa7.52□□□□□ -1.21
GGA3-207ENST00000578896 CENPAP49450 140 aa7.52□□□□□ -1.21
GGA3-207ENST00000578896 SLC7A2P52569 658 aa7.52□□□□□ -1.21
GGA3-207ENST00000578896 UBA52P62987 128 aaKnown RBP7.52□□□□□ -1.21
GGA3-207ENST00000578896 HOXA4Q00056 320 aaPredicted RBP7.52□□□□□ -1.21
GGA3-207ENST00000578896 GUCY1A3Q02108 690 aa7.52□□□□□ -1.21
GGA3-207ENST00000578896 SLC3A1Q07837 685 aa7.52□□□□□ -1.21
GGA3-207ENST00000578896 SCGB2A2Q13296 93 aa7.52□□□□□ -1.21
GGA3-207ENST00000578896 MAPRE2Q15555 327 aa7.52□□□□□ -1.21
GGA3-207ENST00000578896 MEP1BQ16820 701 aa7.52□□□□□ -1.21
GGA3-207ENST00000578896 ZBED5Q49AG3 693 aa7.52□□□□□ -1.21
GGA3-207ENST00000578896 IFI44LQ53G44 452 aa7.52□□□□□ -1.21
GGA3-207ENST00000578896 CCDC92Q53HC0 331 aaPredicted RBP7.52□□□□□ -1.21
GGA3-207ENST00000578896 FAM201AQ5SY85 155 aa7.52□□□□□ -1.21
GGA3-207ENST00000578896 OR2T2Q6IF00 324 aa7.52□□□□□ -1.21
GGA3-207ENST00000578896 UNQ6126/PRO20091Q6UXV3 157 aa7.52□□□□□ -1.21
GGA3-207ENST00000578896 MBOAT2Q6ZWT7 520 aa7.52□□□□□ -1.21
GGA3-207ENST00000578896 ATG16L2Q8NAA4 619 aa7.52□□□□□ -1.21
GGA3-207ENST00000578896 ACOT11Q8WXI4 607 aaPredicted RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms