RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 CELP19835 753 aa8.99□□□□□ -0.97
SS18-210ENST00000578700 CEACAM8P31997 349 aaPredicted RBP8.99□□□□□ -0.97
SS18-210ENST00000578700 PYCR1P32322 319 aa8.99□□□□□ -0.97
SS18-210ENST00000578700 TIMP3P35625 211 aa8.99□□□□□ -0.97
SS18-210ENST00000578700 RPS3AP61247 264 aaKnown RBP8.99□□□□□ -0.97
SS18-210ENST00000578700 NCS1P62166 190 aa8.99□□□□□ -0.97
SS18-210ENST00000578700 RUNX1T1Q06455 604 aa8.99□□□□□ -0.97
SS18-210ENST00000578700 MELKQ14680 651 aa8.99□□□□□ -0.97
SS18-210ENST00000578700 MS4A18Q3C1V0 323 aa8.99□□□□□ -0.97
SS18-210ENST00000578700 ACSF3Q4G176 576 aaPredicted RBP8.99□□□□□ -0.97
SS18-210ENST00000578700 Q5PR19 223 aa8.99□□□□□ -0.97
SS18-210ENST00000578700 ZNF544Q6NX49 715 aa8.99□□□□□ -0.97
SS18-210ENST00000578700 LUZP2Q86TE4 346 aa8.99□□□□□ -0.97
SS18-210ENST00000578700 YRDCQ86U90 279 aaKnown RBP8.99□□□□□ -0.97
SS18-210ENST00000578700 KRTAP1-3Q8IUG1 177 aa8.99□□□□□ -0.97
SS18-210ENST00000578700 NDNFQ8TB73 568 aa8.99□□□□□ -0.97
SS18-210ENST00000578700 ZPLD1Q8TCW7 415 aa8.99□□□□□ -0.97
SS18-210ENST00000578700 ASB10Q8WXI3 467 aa8.99□□□□□ -0.97
SS18-210ENST00000578700 ASB17Q8WXJ9 295 aa8.99□□□□□ -0.97
SS18-210ENST00000578700 NANOS1Q8WY41 292 aaKnown RBP8.99□□□□□ -0.97
SS18-210ENST00000578700 RPL3LQ92901 407 aaKnown RBP8.99□□□□□ -0.97
SS18-210ENST00000578700 C4orf36Q96KX1 117 aa8.99□□□□□ -0.97
SS18-210ENST00000578700 Q96MF0 132 aa8.99□□□□□ -0.97
SS18-210ENST00000578700 TIMP4Q99727 224 aa8.99□□□□□ -0.97
SS18-210ENST00000578700 OR2B2Q9GZK3 357 aa8.99□□□□□ -0.97
SS18-210ENST00000578700 NUAK2Q9H093 628 aa8.99□□□□□ -0.97
SS18-210ENST00000578700 OR51E2Q9H255 320 aa8.99□□□□□ -0.97
SS18-210ENST00000578700 KCNN2Q9H2S1 579 aa8.99□□□□□ -0.97
SS18-210ENST00000578700 ZNF703Q9H7S9 590 aaPredicted RBP8.99□□□□□ -0.97
SS18-210ENST00000578700 WDR76Q9H967 626 aa8.99□□□□□ -0.97
SS18-210ENST00000578700 SIAEQ9HAT2 523 aa8.99□□□□□ -0.97
SS18-210ENST00000578700 LRRC3CA6NJW4 275 aa8.98□□□□□ -0.97
SS18-210ENST00000578700 EIF1AYO14602 144 aaKnown RBP8.98□□□□□ -0.97
SS18-210ENST00000578700 SELENOFO60613 162 aa8.98□□□□□ -0.97
SS18-210ENST00000578700 SMPD2O60906 423 aa8.98□□□□□ -0.97
SS18-210ENST00000578700 FZD7O75084 574 aa8.98□□□□□ -0.97
SS18-210ENST00000578700 KHDRBS3O75525 346 aaKnown RBP8.98□□□□□ -0.97
SS18-210ENST00000578700 CLPXO76031 633 aa8.98□□□□□ -0.97
SS18-210ENST00000578700 HRGP04196 525 aa8.98□□□□□ -0.97
SS18-210ENST00000578700 GALP22466 123 aa8.98□□□□□ -0.97
SS18-210ENST00000578700 CTSSP25774 331 aa8.98□□□□□ -0.97
SS18-210ENST00000578700 GUCA1AP43080 201 aaPredicted RBP8.98□□□□□ -0.97
SS18-210ENST00000578700 BIDP55957 195 aa8.98□□□□□ -0.97
SS18-210ENST00000578700 CARD18P57730 90 aa8.98□□□□□ -0.97
SS18-210ENST00000578700 AQP6Q13520 282 aa8.98□□□□□ -0.97
SS18-210ENST00000578700 SSX1Q16384 188 aa8.98□□□□□ -0.97
SS18-210ENST00000578700 ZNF239Q16600 458 aaKnown RBP8.98□□□□□ -0.97
SS18-210ENST00000578700 FBXL19-AS1Q494R0 122 aa8.98□□□□□ -0.97
SS18-210ENST00000578700 CCDC58Q4VC31 144 aa8.98□□□□□ -0.97
SS18-210ENST00000578700 THEM4Q5T1C6 240 aa8.98□□□□□ -0.97
SS18-210ENST00000578700 HBMQ6B0K9 141 aa8.98□□□□□ -0.97
SS18-210ENST00000578700 LINC00299Q6ZSB3 139 aa8.98□□□□□ -0.97
SS18-210ENST00000578700 ESPNLQ6ZVH7 1005 aa8.98□□□□□ -0.97
SS18-210ENST00000578700 VASH1Q7L8A9 365 aaPredicted RBP8.98□□□□□ -0.97
SS18-210ENST00000578700 ZBTB46Q86UZ6 589 aa8.98□□□□□ -0.97
SS18-210ENST00000578700 LSRQ86X29 649 aaPredicted RBP8.98□□□□□ -0.97
SS18-210ENST00000578700 OR6V1Q8N148 313 aa8.98□□□□□ -0.97
SS18-210ENST00000578700 KDM8Q8N371 416 aa8.98□□□□□ -0.97
SS18-210ENST00000578700 ZNF454Q8N9F8 522 aa8.98□□□□□ -0.97
SS18-210ENST00000578700 FAM83FQ8NEG4 500 aaPredicted RBP8.98□□□□□ -0.97
SS18-210ENST00000578700 OR10H5Q8NGA6 315 aa8.98□□□□□ -0.97
SS18-210ENST00000578700 OR6N2Q8NGY6 317 aa8.98□□□□□ -0.97
SS18-210ENST00000578700 ZFAND2BQ8WV99 257 aa8.98□□□□□ -0.97
SS18-210ENST00000578700 SLC25A44Q96H78 314 aaPredicted RBP8.98□□□□□ -0.97
SS18-210ENST00000578700 KCTD7Q96MP8 289 aa8.98□□□□□ -0.97
SS18-210ENST00000578700 TSSK2Q96PF2 358 aa8.98□□□□□ -0.97
SS18-210ENST00000578700 RBM24Q9BX46 236 aaKnown RBP8.98□□□□□ -0.97
SS18-210ENST00000578700 ISG20L2Q9H9L3 353 aaKnown RBP8.98□□□□□ -0.97
SS18-210ENST00000578700 ACKR4Q9NPB9 350 aa8.98□□□□□ -0.97
SS18-210ENST00000578700 QPCTLQ9NXS2 382 aa8.98□□□□□ -0.97
SS18-210ENST00000578700 GNG8Q9UK08 70 aa8.98□□□□□ -0.97
SS18-210ENST00000578700 B9D1Q9UPM9 204 aa8.98□□□□□ -0.97
SS18-210ENST00000578700 NBEAL1Q6ZS30 2694 aa8.98□□□□□ -0.97
SS18-210ENST00000578700 PNMA8CA0A1B0GUJ8 204 aa8.97□□□□□ -0.97
SS18-210ENST00000578700 TRDV1A0A1B0GX56 115 aa8.97□□□□□ -0.97
SS18-210ENST00000578700 A0A1W2PPR1 153 aa8.97□□□□□ -0.97
SS18-210ENST00000578700 TVP23AA6NH52 213 aa8.97□□□□□ -0.97
SS18-210ENST00000578700 METTL15A6NJ78 407 aa8.97□□□□□ -0.97
SS18-210ENST00000578700 RGS9O75916 674 aaPredicted RBP8.97□□□□□ -0.97
SS18-210ENST00000578700 TFP02787 698 aa8.97□□□□□ -0.97
SS18-210ENST00000578700 HPNP05981 417 aa8.97□□□□□ -0.97
SS18-210ENST00000578700 HLA-DOBP13765 273 aa8.97□□□□□ -0.97
SS18-210ENST00000578700 ENPP1P22413 925 aa8.97□□□□□ -0.97
SS18-210ENST00000578700 S100A5P33763 92 aa8.97□□□□□ -0.97
SS18-210ENST00000578700 RAC3P60763 192 aa8.97□□□□□ -0.97
SS18-210ENST00000578700 ZNF85Q03923 595 aa8.97□□□□□ -0.97
SS18-210ENST00000578700 MOGQ16653 247 aa8.97□□□□□ -0.97
SS18-210ENST00000578700 CDONQ4KMG0 1287 aa8.97□□□□□ -0.97
SS18-210ENST00000578700 TP53I3Q53FA7 332 aa8.97□□□□□ -0.97
SS18-210ENST00000578700 WIPI1Q5MNZ9 446 aaPredicted RBP8.97□□□□□ -0.97
SS18-210ENST00000578700 LINC01590Q5TEZ4 76 aa8.97□□□□□ -0.97
SS18-210ENST00000578700 VASNQ6EMK4 673 aa8.97□□□□□ -0.97
SS18-210ENST00000578700 SLC18B1Q6NT16 456 aa8.97□□□□□ -0.97
SS18-210ENST00000578700 RPL22L1Q6P5R6 122 aaKnown RBP8.97□□□□□ -0.97
SS18-210ENST00000578700 KCTD18Q6PI47 426 aaPredicted RBP8.97□□□□□ -0.97
SS18-210ENST00000578700 CXorf67Q86X51 503 aaPredicted RBP8.97□□□□□ -0.97
SS18-210ENST00000578700 MS4A15Q8N5U1 240 aa8.97□□□□□ -0.97
SS18-210ENST00000578700 MEIOBQ8N635 442 aa8.97□□□□□ -0.97
SS18-210ENST00000578700 YIPF7Q8N8F6 280 aa8.97□□□□□ -0.97
SS18-210ENST00000578700 ZNF511Q8NB15 262 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms